Pleurodeles waltl (Iberian ribbed newt): 138250513
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Entry
138250513 CDS
T10800
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138250513 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138250513 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwl04147
]
138250513 (VPS36)
Membrane trafficking [BR:
pwl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
138250513 (VPS36)
Exosome [BR:
pwl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138250513 (VPS36)
Exosomal proteins of colorectal cancer cells
138250513 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
G1_gp67_C
BBL5
DUF1351
DUF5847
Motif
Other DBs
NCBI-GeneID:
138250513
NCBI-ProteinID:
XP_069061564
LinkDB
All DBs
Position
8:1192812386..1192954244
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AA seq
386 aa
AA seq
DB search
MDRFVWATGLLEINETLVIQQRGVRVYDGEEKAKFDAGNLLLTTHRLIWRDQKNHECCIA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPSSPNKDPGPYQTSKYSFIKLSFKEHGQIEFHR
RLAEEITQKRWERLPASQSIQLNKDTQSGRTRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMDKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTH
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACRMLDSLKLP
IRLRVFDSGVMVVELQTHNEEEMVASAYATVSEKGSLTSEEFAKLVGMSVLLAKERLVLA
EKMGQLCRDDSVEGLRFYPNLFITQN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctttgtatgggctacaggactgctggagattaatgagacactggtgatccag
cagcgcggtgtgcgggtctacgatggggaagagaaggcaaagtttgacgctggaaatcta
ctccttactactcatagactcatttggagggaccagaaaaatcatgaatgctgcattgcc
atccccctgtcccagattgttttcatagaagagcaagcagctggaattggaaaaagtgca
aaaatagtggttcatcttcacccgtcttctcccaacaaagatccaggaccttaccagacc
agcaagtactcattcatcaaactttcgttcaaagaacatggccagattgaatttcacaga
cgtcttgcagaggaaataacgcagaagcggtgggagcgtttgcccgcatctcaatcaatt
cagctgaacaaagatacacagtcaggaagaacaagggctgttggaatagttggcattgag
agaaagctcgaggaaaaaagaaaagagaccgacaaaaacatttcagaggcttttgaagac
ctcagcaagctgatggacaaggctaaggaaatggtagaattgtctaaatccatagctaac
aagatcaaggaaaaacaaggggacatcacagaagacgagacaatccggttcaaatcttat
ttgctgagcatgggcatcgctaacccagttacccgtgagacatatggatctggcacccat
taccacatgcagctggccaaacagctggctggaatactgcaggctcctctagaggaacgt
ggtggaataatgtcgcttacagaggtgtactgtcttgtaaatagagcacgaggaatggag
ttgctctctccagaggatttggtgaatgcttgcaggatgctggactctctgaagttgccc
ataaggctacgtgtttttgacagcggtgtgatggtggtagagctccagacccacaacgaa
gaggaaatggttgcatctgcttacgccaccgtatctgaaaagggctcccttacatccgaa
gagtttgcaaagcttgttggcatgtctgttcttttagcgaaagaaaggctagttctcgca
gaaaagatgggacagctttgcagagatgattccgtggaaggattgcgattttatccaaac
ttgtttattacacagaattaa
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