Pleurodeles waltl (Iberian ribbed newt): 138250538
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Entry
138250538 CDS
T10800
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138250538 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138250538 (EXOSC8)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138250538 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
138250538
NCBI-ProteinID:
XP_069061615
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All DBs
Position
8:complement(1229619066..1229912121)
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRKFLKENCRPDGRELGGFRTTTVNIGSITTADGSALVKIGNTTVIC
GIKAEFAAPTIDAPNQGYIVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIL
KEDLCISNGKLVWVLYCDILCLDYDGNLLDACMCSLLAALKNVQLPAVKIHERTGLAQVN
MNEKTSLTIGKHPVSTSFAVFDNTLLIVDPTGEEESLATGTITIVIDEENRLCCVHKPGG
SPLTGENLQDCISRAITRHKEVKMLIDKIIESIKAK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaaactgtggaacctttggaatattacagaaaatttctgaaagaa
aactgtcgaccagatggacgagagcttggtggatttagaactacaactgtcaacataggt
tctattacaactgcagatgggtctgccttggtgaaaattggaaataccactgtgatctgt
ggcatcaaagcagagtttgcagcacctacaatagatgcacccaaccaaggatacattgtt
cctaatgtggatctgccacctttatgttcatcaagattccgctctgggcccccaggagaa
gaggctcaagtggcaagtcaatttatagcagatgtgattgaaaattcacagataatatta
aaagaagatttgtgtatttcaaatggcaagctcgtctgggtactgtactgcgatattttg
tgtctcgattatgatgggaatctattagacgcttgcatgtgttccttgcttgcagcttta
aaaaatgtgcagttgccagcagttaaaatacatgagagaacaggtctcgcacaagtgaac
atgaatgagaagacttctttgaccataggaaaacatccagtttcaacatcatttgctgta
tttgacaacactttgctaattgttgatcctactggagaagaagaaagtctggcaactgga
acaataaccattgtgattgatgaagaaaatcgactttgctgtgttcataaaccaggtggc
agtcccctcacgggcgaaaatcttcaggattgtattagtcgagctatcacgaggcacaaa
gaagttaagatgctaatcgataaaataattgaaagtatcaaggcaaaataa
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