Pleurodeles waltl (Iberian ribbed newt): 138255249
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Entry
138255249 CDS
T10800
Name
(RefSeq) protocadherin-23-like
KO
K16507
protocadherin-16/23
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138255249
Cell adhesion molecules [BR:
pwl04515
]
Cadherins
Cadherin related
138255249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
CADH_Y-type_LIR
Cadherin_4
TMEM154
Motif
Other DBs
NCBI-GeneID:
138255249
NCBI-ProteinID:
XP_069061932
LinkDB
All DBs
Position
1_2:complement(710997539..711483724)
Genome browser
AA seq
2269 aa
AA seq
DB search
MGSNQRCLSIFQVITVPKVKYLIQSVKHLFLLENLMPAKGICSLKSLENQIALKNNVHFK
IAAEDEDSHFQIDHSSGELLLVDELDYEFASHYLLRVIIEDQNEEPPQNSTVFINIEVGD
VNDHSPSFPNSFIVIAVDENVSVGTIVHTFSAEDGDGSLVNSWLKYSLSTSSPRENPFSV
HPWNGTLTTALQLDREVRSFFVVTVTATDQSSVIPDRRQSSMTAKILILDINDNSPSFVS
SPVASILEDVEVGTFVHRFIAKDPDEGTNGEVAYHIISGNENRTFSLDAATGLLTLSSRL
DHEAEKYYSLTVVASDNGVPSLSSIQSFTINVFDVNDVTPSFQQQFYEASVSENRDPGEF
IIKVEAVDADSGVNSLLSFEILPGIGYKLFNISSETGEMVTSSTLDRETQEIFRIKVLVK
DAGTPSLSSTTIIMCTVLDENDNAPRLLLPSATIHIQEYHEPGVILTAMAVDQDAGNNGS
VQYMIETEQSGQQLQPAIVDLPKVGAELEGELPAEQELPLLNSMAPRHPARKRKGTTVPS
SPSTTSDNDDRGMEWPPVESGRRKERQGKNKIPESLRIMQENDIEEEDDDEQVIVQAGTE
KYDITIQPALRDVAQAAPTARIFIRPEQRPAPSHSSVEVCTEESEQEENIVICSMCHVSV
RRGKPGSHYGTGRQTTHVKKNHAILWEEHLKKAAECGGGGEDEQSQETLSTTGQMMVKDE
EEESDILMQSRPAPSSASKSPASATSQWHRKAQHGVSEIPATYDANPQSDKCPGGPAGEQ
IVEAGYPGIRVSKDMKREEGQRARGARAEEDEEEKDAGTEEESATDYQLLVFGLYILQHL
TPQLDHYLLPGGNFGKYIAINNTSGELWATQAFDREEVSNFSLIIECHDFGRPQKRAQAK
LSIVVLDANDNNPTFTKNVYHTSLIEDAAIGSVVLDLLAFDYDEGLNGEITYSLIDSTMG
FFTVNRSTGAIVTTQSLDRETINQYIFRAVACDCSMDGPKRCVTTQVVVHIEDINDNSPH
FTENPINAHIDMETTLNKTITTVRAIDPDQGTNGTVEFHFAEDEPLFYINRHTGEVQILR
LMIYETLSPKVLKVLAVDQGKPARTATGILVIHIVGQAQDIEFVYNVYEAVLPENSSAGT
SVVTVEARDHSLTRERVHYSIFSGDKDAVFSINSGTGEITVKEPAFLDFEATEKFNLVIL
AENLRQTAYCTVIVFIQDVNDNLPQFEQHDPKSSVSEGQAYKTYVLQVFAIDDDSGLNGE
IEYSIIDDAPLGYTVTQLSANDVDLNPTIFYSLPENGNPGLRFALDRYTGVLTLVKPLDY
EEAAEYRLRVQASDSLHHTEAEVTIQVSDVNDNTPIFTQDSYQVMLSELAPVHTSVLTVS
ATDEDSRENGMISYRILAPLHDFSINPINGTVFTEKQMSSNRNSKVIQLLIEAEDHGTPA
LSAVVSVGIQIQDINNCAPQFTNEHYSISVSEDVSVGTSVLTFSAVDRDWSPDNTFIDFF
IISGNTQNAFVVETNIVQIDSTRKTIGHLVVMSALDRETTSTFKLAIIATDRGTPPLNST
ATVLISVLDANDSPPVFTSLEYHAEVRESTPVNRMITVISANDCDAGANADITYSVVSGN
DLGHFKLDRKNGSVEVAKALDYEKVLKYTLTIQATDGGEDGGNIAFATVSISILDDNECV
PVFLFPTLNCVIRENLPALTHMCTAKAQDFDSGPYGLLTYSFQSSCLTENRKSVDLDLFS
IDPMTGDIHTKQTLDYERQIKYCFIVQAKDKSDSTATVTIHVDVEGVDEYDPVFLKNIYL
FHLNETNDIGQVIGKLAASDNDDGLDGVIEYSLETPSQFFSLNKTSGELSLTRHLSQKGS
NLWKKESTMEFRVKAHSPKVDSRSTSCMVIVNMSTSLEMHPVASVNILHISLIISLVIFL
ILSLSLAVLVLRYKRKYVKNKSGKKEMSKPKAGRNDLHLCHSNGKHPAPEASLTEWLCLV
DFRENKDAVKQSRHSDSSGHGSAEGETAEDDEIKRINEHSCRKRSGSALSECGSRMPDSG
IARESAQLSFQSVETDITIATGSAESINNFKEESGGEASDMHFPFEKEPGKAHNNLAPKE
ESLKSGITGSYIFVPHDQDSRFGSLVSLVASDEDLRGSYNWDYMLSWEPRFQPLSSVFHD
IAKLNDDASQTQSLPFEKQSFIFPPPLITSVAQPGVKAVPPRMPTVNTGPTFFKYPCSPF
IHNAGYTTTAMTPNFAPSLSLLTVQTPTASPVSSDSGLMGTCLIKLSRE
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atgggttctaatcaaaggtgtttatcaatatttcaggtcatcactgtccccaaagtgaaa
tatcttatccaaagcgtcaagcatttattcctcttagaaaatctcatgcctgcaaaaggg
atatgttctttaaagtcacttgaaaaccagattgctctgaagaataatgtgcattttaaa
attgctgccgaagatgaagacagccattttcaaattgaccattcttcgggcgaactgctc
cttgtcgatgagcttgactacgagtttgcatctcattacctcctcagagttatcatcgaa
gaccaaaacgaggaaccaccacagaattccactgtttttatcaatatcgaagtaggagac
gtgaatgaccactccccctctttcccgaacagttttattgtaattgcggttgatgaaaat
gtttcagttggcactatcgtgcacacgttcagcgcagaggacggcgatggaagcctggtg
aacagttggttgaaatactccctgagcacctcctcgccaagagaaaatccattttccgtt
cacccatggaatggcacattgacgaccgccctccagctggatagggaggtcagatctttt
tttgtagtcacagtgacagcaacagatcagtcctctgtgattccagatcgcagacagagc
tccatgactgcaaagatcctcatactggatattaacgacaacagtccttcttttgtgtct
tcacctgtagcctctatcttagaggatgtagaagtgggcacctttgttcatcgcttcatt
gccaaagatccggatgaaggtacaaacggagaagttgcgtaccacatcatatcaggaaat
gaaaatagaacattttcgctggatgcggcgacaggtttgctgaccctctcctctaggttg
gaccacgaagccgagaagtactacagtttgactgtcgtagcatccgataatggtgttccc
tcactctcctcaattcagtcttttaccataaacgtatttgacgttaatgacgtcacacca
tcatttcaacagcaattttacgaggcctcggtttcagagaacagagatccaggcgagttt
ataattaaagttgaagccgtggacgcagattcaggggtcaattctctactttcatttgag
attttaccaggtataggatataagctattcaacatcagctctgaaactggtgaaatggta
acaagctccacactggacagagagacacaagagatattcaggataaaagtgttagtgaaa
gatgccgggaccccttctttgtcaagcaccacaattatcatgtgcacagttctagatgaa
aatgataatgcacccaggcttcttcttccctctgctacaattcacattcaagagtatcat
gaaccaggtgtgattcttactgcaatggctgttgaccaggatgctggcaataatggatct
gtccagtatatgatagaaacagagcaaagtggacagcagctgcagccagcaatagtagat
cttcccaaagttggagcagaactggagggcgaacttcctgccgagcaagaacttcctctt
ttaaactcaatggctcccagacatccagcaagaaaaaggaagggtactactgtaccatct
tctccaagcaccacttctgataacgatgataggggcatggagtggccccccgtagagtcc
gggagacgcaaggagagacaagggaaaaataaaattccagagagccttagaatcatgcaa
gagaatgatattgaggaggaagatgatgacgaacaagtcattgtgcaagctggcacagaa
aagtatgacattactatccaacctgctctgagggatgtggcacaggcagcaccaactgct
cgcatatttataaggcccgagcagagacctgcaccatcccattcctcagtagaagtatgc
actgaagagagcgaacaggaggagaacattgtaatatgctccatgtgccacgtgagtgtt
cgtcgaggtaagcctggttcacattatggtactggacgccagacgacccatgtgaaaaag
aatcatgcaatcctgtgggaggaacatcttaaaaaagcggctgaatgtggtgggggtggt
gaagatgagcagagtcaggaaacattatctacaactggtcaaatgatggtgaaagatgag
gaagaagagagtgacatcctcatgcaaagcagacctgcccccagcagtgcatccaaatca
cctgcctcagcgacctcacaatggcatagaaaggctcaacacggagtgtcggaaatcccg
gctacatacgatgctaacccccagtctgacaagtgccccgggggtcccgcaggggaacaa
atcgtggaagcaggatacccgggtatccgggtttccaaagacatgaaaagggaagaagga
caacgcgcgcgtggtgcaagagcagaggaagacgaagaggagaaagacgccgggacggag
gaggagagcgcgacagactaccagctgctggtattcggcctgtatattctccagcatctg
acaccacagttggatcactatctcctgcctggtggaaactttggcaagtacatcgccata
aataacacttcaggagagttgtgggctacccaagcatttgatagagaggaagtcagcaac
ttttccctcatcattgaatgtcatgactttggcagaccacagaagcgtgcccaggccaag
ctaagcatcgttgtcttggatgcaaatgacaacaaccctacatttacgaagaatgtctat
cacacatctttgatagaagatgcggccatcggatcggtggtccttgacctgttggctttt
gactacgacgaaggcttgaatggagaaataacatattcactgattgactccaccatgggg
ttctttaccgtaaacagaagtacaggagccattgtaaccacacagtcactggatcgagag
accataaatcagtatatatttagggcagttgcgtgcgattgcagcatggatggcccaaaa
agatgtgttaccactcaagtagttgtgcatattgaagatattaatgacaactctccacat
ttcacggagaatccaatcaatgcccacatagacatggagacaacattgaacaagacaata
accactgtgagagcgattgacccggatcaaggaacaaatggcactgttgagtttcatttt
gcggaagatgagcctttgttttatatcaaccggcacacgggggaagtccagatactacgg
cttatgatttatgaaacactaagtcctaaagttcttaaggtgttggctgtggatcaggga
aagccagcgaggactgcaactggcatcttagtcatccacatagtgggacaggcgcaagat
attgaatttgtctacaatgtctacgaagcagttctccctgaaaacagcagtgcaggtaca
tcggttgtaactgtcgaagctcgagatcacagcctaactagagagagggtacactatagc
attttcagtggagataaagacgcagttttctccatcaattctggaacaggcgaaatcaca
gttaaggaaccagcgtttcttgattttgaagccacagagaagttcaatcttgttattctt
gctgaaaatctgaggcaaacagcctattgcacagtgatagtcttcatccaagatgtgaat
gataacttgccacagttcgagcagcacgatccaaaatcatcagtatcagaaggccaggcc
tacaagacatatgttttacaggtgtttgcgattgatgatgatagtggactgaatggtgaa
attgaatattcaatcatagacgatgcaccgcttggttacaccgtgactcagctatcagct
aacgacgtcgatttgaatccaacgatattctacagtttacctgagaacggcaatcctgga
ctaaggtttgctttggatcgctacactggagtccttactctcgtgaagcctctagattat
gaagaagcagctgaatatcgactgcgagtccaggcttctgactcactgcatcacacggaa
gcggaagtgaccattcaagtttcagacgtgaatgacaacacacccatatttactcaggat
tcatatcaggttatgctgtccgagctggcacctgtgcacacctctgttctgaccgtgtct
gccacagacgaggactcgagggagaacgggatgatttcctaccgaatacttgcacctctc
cacgacttctcaattaatcccattaacggcacagtgttcactgaaaagcagatgtcatct
aatcgaaacagcaaagtgattcagcttcttatagaagcggaagaccacggaacccccgca
ttgtccgctgttgtatccgtggggattcaaatccaggatatcaacaactgtgctccccaa
ttcactaatgaacactatagcattagtgtgagtgaagacgtctctgttggcacgagcgtg
ctaaccttttcagccgtggatcgcgattggagtcctgataacacatttattgacttcttt
atcatcagtggcaacacacaaaatgccttcgtggtcgaaactaacattgttcagattgac
tctactcgaaaaactattggtcatcttgttgtaatgagtgctcttgacagggaaacaaca
tccaccttcaaattagccatcattgccacggatcgtggaacaccaccgctaaactcgact
gccacagtattgatcagtgttcttgatgccaatgacagcccaccagtattcactagtctg
gagtatcatgctgaggttagggagagcacccctgtcaataggatgatcacagtaatttca
gctaatgactgtgatgctggggcaaacgctgatattacttacagcgttgtttctggaaat
gacttgggccatttcaagttagacagaaaaaatggttctgttgaagtagctaaagctcta
gactatgagaaagtcttgaaatatactttaactatccaggccacagatggaggtgaagat
gggggaaacattgcctttgcgactgtttctatatcaatcctcgatgacaatgaatgtgtt
ccagtgtttttgtttcccaccctcaactgtgtcattcgtgagaatcttccagcattaaca
catatgtgcactgccaaagcccaggactttgactcaggaccttatggcctcctcacatac
tcctttcagtcatcttgtttaactgagaatagaaaatccgttgacttggatttgttttct
atagatcctatgactggggatatccatactaaacaaacacttgactatgaacgtcaaata
aagtactgtttcattgtccaggcaaaggataaaagtgactcaacagctactgtcaccatc
catgtggatgtagagggagttgacgagtatgaccctgttttcctaaagaatatttatttg
tttcatctcaatgagacaaatgacattgggcaagtaattggaaaattagcagcatcagat
aatgatgatggactagacggtgttattgagtattcccttgaaacaccctctcaatttttc
tcacttaataaaactagtggagagttatcactcacaagacacctttctcaaaaaggaagt
aacttgtggaaaaaggagagcacaatggaattccgggtgaaagctcacagtcccaaagta
gactccagatcaaccagctgtatggtcatagtgaacatgtccacatctcttgaaatgcac
cccgttgcctctgtaaacatccttcacataagtctcatcatctccttggtgattttcttg
attctgtcattaagtcttgcagtacttgttttgaggtacaagcgcaaatatgtgaaaaac
aaaagtgggaaaaaagagatgtcaaagccaaaagctgggcgtaatgacctccatctgtgt
cacagtaatggaaaacatccagctccggaggcatccctaacagagtggttgtgtttagtg
gactttagagaaaataaagatgctgtcaagcaaagcagacactctgactcaagtggtcat
gggtcagcagaaggggaaacagccgaagatgatgaaataaagagaatcaatgagcattct
tgcaggaagagatctggctcagctctaagtgagtgtggctcacgcatgccagactctggg
attgcaagagagtctgcacaactttcattccagtctgttgaaacagatataaccattgca
actggaagtgctgagagtatcaacaacttcaaagaggaaagtggaggagaagccagtgac
atgcattttccttttgagaaagagccagggaaagcacataataatttagcaccaaaagaa
gaatccctaaagtcaggtatcacaggaagctacatctttgtgcctcatgaccaagattca
agatttggttcccttgtttctttggtggcatcagatgaagacttgagaggtagttataac
tgggactacatgctaagttgggaacccagatttcaacctctgtcttctgtctttcacgat
atcgcaaagcttaatgatgatgcttcacaaactcagagtttaccctttgaaaaacagtcc
tttattttcccacctcccttgataacatctgtagcacagccaggggtaaaagccgtgccc
ccacgaatgccaacagtaaacacagggccaacttttttcaaatatccttgttcaccattc
atccacaatgcggggtataccacaacagccatgaccccgaactttgctccctctctctct
ctacttactgtgcagacaccaacagcttcccctgtctcttctgattctggactgatggga
acttgcttaattaaactatctcgagaataa
DBGET
integrated database retrieval system
