Pleurodeles waltl (Iberian ribbed newt): 138256550
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Entry
138256550 CDS
T10800
Symbol
RNF4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138256550 (RNF4)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138256550 (RNF4)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138256550 (RNF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_4
zf-rbx1
Prok-RING_4
RING_XB3-XBAT31
Rtf2
zf_RING_Vps8
zf-RING_10
zf-UDP
zf-C3HC4_4
zf-RING_6
TRAF3_RING
Sina_RING
zf-RING_16
Zn_ribbon_6
TerY_C
TackOD1
zf-RING_11
zf-P11
DZR
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
138256550
NCBI-ProteinID:
XP_069061967
LinkDB
All DBs
Position
1_2:complement(1198090732..1198292288)
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AA seq
253 aa
AA seq
DB search
MSTSQRRQRGLARPNSRLQRKRRRASNTSTPMATQTETIELEENADEEVVDLTCESASDA
VVVDLTHNDSVVFVGEARLKMIYQEKSLFLRHQRQPDTGLRNEQKTLSSQSTMQGEGPLE
VTTGETISVSILLICLERRRRRRRNRTTQGPDSCVLSSGDEDSEGDVCVASTFSAYLNKL
KDGTASPRPPGTVTCPICMDVHTEIIQSGRVIVATKCGHVFCSQCLRDAMKNSSTCPTCR
KKLTHKQYHPIYI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaagccagcgtagacaacgtggactagcaagacctaattcgagattacaacgg
aaacggagaagagcctcaaatacatccacgccgatggcaacgcaaacggaaacaatagaa
cttgaagaaaatgctgatgaagaagttgttgatcttacatgtgaatcggcttcagatgca
gtggtagttgacttaactcacaatgattctgttgtgtttgttggagaagcaagacttaaa
atgatctaccaggaaaaatccctttttcttcgacaccagaggcagcctgacactggattg
aggaacgaacagaagacattgtcctctcagtccactatgcaaggtgaaggccctttggaa
gtcactacaggtgaaactataagtgtatctattttgctcatttgtttagaaaggcgcagg
agaagaaggagaaatcgaacaactcaaggtcccgacagctgtgtgttaagtagtggtgat
gaagactctgaaggggacgtgtgtgtagctagtactttttcagcatacttaaataagcta
aaagatggaacagcaagtcccaggcctcctggtacagttacttgtccaatttgcatggat
gttcacactgagatcatacagagtggacgagttattgtggcaacaaaatgtggacatgtc
ttctgcagccagtgtctccgtgatgctatgaaaaacagcagcacttgcccaacatgcaga
aagaaactaactcacaaacagtatcatccaatatacatctga
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