Pleurodeles waltl (Iberian ribbed newt): 138258764
Help
Entry
138258764 CDS
T10800
Name
(RefSeq) transcription factor COE1-like isoform X1
KO
K09103
early B-cell factor
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138258764
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
138258764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
138258764
NCBI-ProteinID:
XP_069062134
LinkDB
All DBs
Position
1_1:27624299..28033115
Genome browser
AA seq
601 aa
AA seq
DB search
MFSIQDTLPRGGLTMKEEPMSGGLTSVRSWMQNSGILDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLAMYDRQGQPVEIERTSYIDFVEKDREQTGEKTNNGIHYRLQLLYSNGI
RTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPTEATPCIKAISPSEGWTTGGATVIVIGDNFFDGLQVVFGTMLVWSELITPH
AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQKVVPRHPG
DPERLPKEVLLKRAADLVEALYGMPHNNQDHLLKRAADIAEVLYNVPRNTSQLTSLTGNH
AHSGMMGVNSFGSQLAVNIAEANQGTDQGYSRNTSSVSPRGYVPSSTPQQSNYNTITSSM
NGYGGGGMTGLGVPGSPSFLNGSTANSPYAIMPSSPPLGASSITLPSSGNSSASAGVFSF
SPVNMISAVKQKSAFAPVVRPQTSPPPTCTSTNGGSLQDQSFEDADKYHPPARSMQGLAY
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttctctatacaggatactctgccccgtggggggctgaccatgaaggaagagccgatg
agtgggggcctgacctcggtccggtcttggatgcagaacagcgggatcctggatgccaac
accgccgcccagagtggtgtgggtctggccagagctcattttgagaagcagcctccttcc
aacttgaggaagtccaacttcttccacttcgtcctggcaatgtatgaccgccagggacaa
cccgtggagatcgaacggacgtcctacatagactttgtggagaaggacagggaacaaact
ggtgagaagacgaacaacggcattcactaccgactgcagctgctgtacagcaacgggatc
cgaacagagcaagatctctatgtccgactcatagactccatgtccaaacaggcaataatc
tacgaaggacaagacaagaacccggagatgtgtcgcgtgctcctcacccacgagatcatg
tgcagccgatgttgtgacaagaagagctgtgggaaccggaatgaaacaccctctgacccc
gtcatcatcgacaggttcttcctcaagttctttctgaagtgcaatcagaactgtctgaag
aatgccggaaacccgcgggacatgaggcggttccaggtggtggtgtcgacgacagtgaac
gtggatggccatgtcctcgcagtgtccgacaacatgtttgtgcacaacaactccaaacat
ggccgccgagcacgtcgcctcgacccgacggaagccaccccttgcatcaaggccatcagc
ccgagtgaaggatggaccacaggaggggccaccgtcatagtcatcggtgataacttcttt
gacggcctgcaggtggtcttcggcaccatgctggtgtggagcgagctaatcacgcctcat
gccatccgagtgcaaacgccgccacgacacatccccggtgtggtggaggtcacgctgtcc
tacaagtccaagcaattctgcaaaggagctccaggacggttcatctacacagcactgaat
gagccaaccattgactacggtttccagaggttacagaaggtggtcccaaggcatccgggg
gacccggagaggttaccgaaggaagtcctgctgaagagagcagctgaccttgtagaggcc
ctctatggaatgccacataataatcaggaccacctcttgaagcgagcagcagacattgcc
gaagtcctatacaatgtgccccgcaacaccagccagctgacgtccctcaccggcaaccac
gcccactcaggaatgatgggagtcaactcctttgggagccagttggctgttaacatcgca
gaagcaaaccagggtacggatcaaggctattctaggaacacaagtagtgtgtcacctcgg
gggtacgtgcccagctccaccccccagcagtccaactacaacaccatcacgtctagcatg
aatggctacggcgggggtggaatgacaggccttggggtgcccggctcacccagcttcttg
aacggttccaccgccaactctccatatgccattatgccctcaagcccacccctcggtgcc
tcctccatcactcttccttccagcggcaattcctccgcatcagcgggcgtcttctctttc
tcacctgtcaacatgatctctgcagtcaagcagaagagcgcctttgcccccgttgtcagg
ccgcagacctctccaccaccaacgtgtaccagcacaaacggaggcagcctccaagaccag
tcttttgaggacgcggacaagtaccaccctcctgctcgctccatgcaagggctggcctat
tcctaa
DBGET
integrated database retrieval system
