Pleurodeles waltl (Iberian ribbed newt): 138258834
Help
Entry
138258834 CDS
T10800
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwl03009
]
138258834 (SHQ1)
Ribosome biogenesis [BR:
pwl03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
138258834 (SHQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
138258834
NCBI-ProteinID:
XP_069062206
LinkDB
All DBs
Position
9:complement(11844999..12011509)
Genome browser
AA seq
710 aa
AA seq
DB search
MITPAFDLSQDPEFLTIIIKVPYARVSELDLYFEGDEFKFYAKPYFLRLNLPGRIVEDGR
EKASYNVDEGTFTVKLPKEAPGQHFEGLGMLTSLLAPKGSRSAKPLVEELDASADPEEEE
DDFDWQIEQIPYEETCSALPSQCSYGFGNLRSGVFSRLQGELSDVIDLKSPDETPIEDRQ
AAQLAAEDAKFDPDHYLADLFEDEAIRSMLRYTPWWAAARTKNAAQDGRSSPDQDSQEPA
VVFSDEEKQKLRNFKNKSFLLDKKARSRVYLSLVDVLLAYCYDIRVTEGERNVESSWNIR
KLSGSLSWLQNYSSIHEVLVSFGRRVLCYPLYRHFLLVLEAVKDASLLLQMGKAAVLKCF
LQIHRIFQENDPAYILNDLYITDYCVWIQKIKSKKLAALANCLQTAALTKADLRFELDEL
ELAALLVQEEELEASGAGKKQSCGPSQANASGTEESSSSSSSSNDTEFDSSSGTDKDTDS
SDDTEDSVSDEDGVSDGEHVKTASSRETLLEKTPPLVEVLGLIQNTDTSGSGGQQPGESL
HPPPSSGDRVEELSEKLWTTVVLSEPSGDLASEVEPGLHKAVSHGAQKSHETDTGKVRCP
LASPTVSGRPEGEPGDHLPATVVLPEGSKERAAEVGLPGTDAAQPPRDPGIEITDGSFQS
PRISGNQTLIEELGEYLQTAAVLSECCAERATELESGWQDTETESTPDAQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatcactccagcctttgacctgagccaagacccagagttcctgaccatcatcattaaa
gtcccgtacgccagagtgtcagagttggacctgtactttgaaggggacgagttcaagttt
tacgccaagccctactttctgagacttaatcttcctggaaggattgttgaagatggaaga
gaaaaagcctcctacaatgttgatgaagggacatttaccgtgaagctgccgaaggaggcg
ccgggacagcacttcgaggggctgggcatgctcaccagcctcctggcaccgaaggggtcc
cgctcggccaagcccttggtggaagagctggatgcctctgcagacccggaagaggaggag
gatgattttgattggcagattgagcagatcccttatgaggaaacctgctcggccctcccc
tcccagtgcagctatgggtttgggaacctgcgctctggagtgttcagccggcttcagggt
gaattgagtgatgtcattgatctcaagagcccggatgagacccctatcgaggatcgccaa
gcggcccagctggctgccgaagatgccaaatttgatcccgatcattacctggcagacctg
tttgaagatgaagccatccgctcgatgctgaggtacacaccctggtgggcagctgcgagg
accaagaatgctgcacaggacggaaggagctctccggaccaggacagccaggaaccagca
gttgtattttctgatgaagagaaacagaagctgcgaaacttcaagaacaagtccttcttg
ctggataagaaggcccgcagccgggtgtacctttcgttggtcgatgtccttctggcgtac
tgctacgacatccgggttacggaaggtgaaagaaacgtagagtcttcgtggaacattcga
aaactgagtgggtccctgtcttggcttcagaattacagttctatccacgaggtgctggtg
tcctttggaaggagggtcctttgttacccactgtacagacacttcctcctggtgctggaa
gccgtgaaggacgcgagcctgctcttgcagatgggtaaagcagcagttttgaaatgtttc
ttacaaattcaccgcattttccaagagaatgacccggcctacatcctcaatgatctctat
atcaccgactactgtgtctggatccagaaaatcaagtccaaaaagttggcagctcttgcg
aattgcttgcagacggctgcactaaccaaggcggacttgcgatttgaactggacgagctg
gagttagcagcattgcttgtgcaagaggaggagctggaggcttctggggcagggaagaag
cagtcgtgtggaccttctcaggctaacgcaagtggcacagaggagtcgagtagcagctcc
tcctcctccaacgacaccgagttcgactcgtcatctgggaccgacaaagacacagattca
tcagacgacacagaggacagcgtttcagatgaagacggggtgtcggacggcgaacatgtg
aaaaccgcctcttctcgagagacccttctggagaagacacctccactggtggaggtcctt
ggactgatccagaacacagacacatctgggagtggtggccaacagccaggagagtctttg
catccgcccccttcctctggagaccgagtggaagagctgagtgaaaaactctggacaact
gtggtcctttctgagccctctggagacctggctagcgaggtggagccaggtttgcacaaa
gcagtgtcacacggtgctcaaaagtcgcatgaaactgatacgggaaaggtaaggtgccct
ctggcgtcacctactgtttctggaagaccagagggagagccaggagaccacctcccagcc
acagttgtgcttcctgaaggctctaaggaaagggccgctgaggtgggtctccccggcaca
gatgctgctcagccgccacgggaccctggcattgagatcacggacggttctttccagtca
cctagaatttctggaaaccaaacactgattgaagaacttggagaatatttgcagacggca
gctgtgctctctgagtgctgtgcggagcgggctacagagctggagtctgggtggcaggac
accgagacggagagtactccagatgcacagtaa
DBGET
integrated database retrieval system
