KEGG   Pleurodeles waltl (Iberian ribbed newt): 138258969
Entry
138258969         CDS       T10800                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03013  Nucleocytoplasmic transport
pwl04141  Protein processing in endoplasmic reticulum
pwl04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    138258969 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    138258969 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    138258969 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pwl03019]
    138258969 (SEC13)
   04131 Membrane trafficking [BR:pwl04131]
    138258969 (SEC13)
Messenger RNA biogenesis [BR:pwl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     138258969 (SEC13)
Membrane trafficking [BR:pwl04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    138258969 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    138258969 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    138258969 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd EIF3I WD40_Gbeta Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 138258969
NCBI-ProteinID: XP_069062426
LinkDB
Position
9:69534385..69566739
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILIADLRGHEGPV
WQVAWAHPMYGNMLASCSYDRKVIVWKEENGTWEKSYEYTGHDSSVNSVCWAPHDYGLML
ACGSSDGAISMLTYTGDGPWEVKKISNAHTIGCNAVSWAPAVVPGSLVDQPSGQKPNYIK
RFASGGCDNLVKIWKEEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSAIASCSQDGRVF
IWTCDDAAGNSWTPRLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCIS
DVNKGQGAVSAVTEGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtgtctgtaattaacacagtcgatacgtcccacgaggatatgatccatgatgcccag
atggattattatggcacacggctggccacgtgctcctctgaccgctcggtgaagatcttt
gatgtcaaaaatggaggacagatcctcatcgctgatcttaggggacacgagggaccagta
tggcaggtagcctgggcccacccaatgtatgggaacatgctggcctcctgctcctacgac
cggaaggtgattgtgtggaaagaagaaaacggcacctgggaaaagagttacgagtacact
gggcacgactcctcagtgaactccgtgtgctgggccccgcatgactatggactgatgctg
gcttgcggtagctcagatggagccatctccatgctcacctacacgggagatggcccctgg
gaagtgaagaagataagcaatgcacatacgatcggatgcaatgctgtgagctgggcccct
gcagttgtccctggtagccttgtagatcagccatctggtcaaaaaccaaattacatcaag
agatttgcatctggtggttgtgataacctagttaaaatctggaaagaggaagatgggcag
tggaaagaagatcagaagctagaggcacacagtgactgggtgcgggatgtggcctgggca
ccatcgattggcctgcccacaagtgctattgccagttgctcacaggatggcagagtgttc
atctggacgtgtgacgatgcagcgggcaactcctggacccctcggctgctacacaagttc
aatgatgtggtgtggcatgtgagctggtccattacagccaacatactggctgtgtcaggt
ggagacaacaaggtgactctgtggaaagaatcagtggatggacagtgggtttgcatcagt
gatgttaacaagggccaaggagctgtgtctgcagttacagaaggacagcagaacgagcag
tga

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