Pleurodeles waltl (Iberian ribbed newt): 138258996
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Entry
138258996 CDS
T10800
Name
(RefSeq) contactin-4-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138258996
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pwl00537
]
138258996
Cell adhesion molecules [BR:
pwl04515
]
Immunoglobulin superfamily
Contactins
138258996
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pwl00537
]
Others
138258996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Sp38
Ig_C17orf99
C2-set_3
C2-set_2
Ig_4
Pur_ac_phosph_N
Tissue_fac
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
138258996
NCBI-ProteinID:
XP_069062462
LinkDB
All DBs
Position
9:complement(97898181..98687212)
Genome browser
AA seq
1028 aa
AA seq
DB search
MSLLCKMLVLQLLMLGLADDSALHGPTFTQEPTDVIFPLDPEEKNVRLSCEVQGNPKPTL
RWKVNGFEVVSAVDGRYVLEDGGLVINNPNKTQDTGTYQCIASNSFGTIVSREAKLQFAY
LENFVTRTRNTVSVREGQGMVLLCGPPPHSGELTYAWIFNEYPPFVQQDNRRFVSQETGN
LYIAKVERSDVGNYTCVVTNTVTNTRVLGPPTPLILKHDGVMGEYEPKIEVHFPETVPSA
KGTTVKLECFALGNPVPTISWRRADGKQISRKVRRHRTSGVLEIPNFQQEDAGLYECVAE
NSRGKNVARGQLTFYAHPNWIQKINDAHIAIEENIFWECRASGRPKPSYSWLKNGRELVT
RDRVQIEHGALTITSVNVSDSGMYQCVAENRHGTIYASAELRVIAVGPDFSKTFVKRQTL
AKVGGAVIVECKPKASPRPSITWKKGRDILKENERITVLEDGSLRIANITKSDAGAYTCM
ASNHFGTATSTGNLVVKDATQVIVPPSSMDVTVGESIVLPCQVTHDASLDVTFSWVFNGQ
LIDFEKDGDHYERVGGDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLVVRGPPGA
PDALTVEEITDTTAQLSWMPGVDNHSPITVYVVQARTPFSVGWQAVNTVPEIIDGRSFTA
TVVGLNPWVEYEFRVIATNLIGIGEPSKPSDKRRTEEALPEVTPGNVSGGGGTKSELVIT
WEPVPEELQNGGGFGYVVAFRPFGTVSWMQTVVASSDASRYVFRNESLPPFSPYEVKVGV
YNNRGEGSFSPVTVVYSAEEEPSRAPPAVFARSLSASDMEVSWVAVPENLNKGRIQGYEV
RYWRHDDKEENARKLRTIGNQTSIKISNLKGSESYLLAVKAFNTAGTGPSSAIINVTMRK
PPPSQPPGNVSWNSSDSKIIVRWDQVKALENESEVKGYKVFYRWSRQSITSVIETNQTSV
ELSLPFDEDYIIEIKPFSEGGDGRSSEQIRIPKSSNAYARGSGASTSNACTLSAISTIMI
SLTARSSL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgctatgtaaaatgctggtgttgcagctgctgatgttgggccttgcagatgac
agtgctttgcatgggcccacgttcacccaagagcccactgatgtcatcttcccactggat
ccagaagagaagaacgtacggctgagttgtgaggtgcagggaaaccccaaacccacgctg
aggtggaaagtaaatggatttgaggtggtctcggctgtggatggtcgttatgtcctggag
gatggaggactggtcatcaataatcccaacaagacgcaggacaccggcacctaccagtgc
attgcaagcaacagcttcgggaccattgtgagcagagaagccaagctgcagtttgcctat
cttgaaaactttgtcaccaggactcggaacacagtgtcagtgcgagaggggcagggcatg
gtactgctctgtggacccccacctcattctggagaactgacctacgcctggatctttaat
gaatacccaccatttgtgcagcaggacaatcgtcgattcgtctcccaagaaactggaaat
ttatatattgcaaaagtggaaaggtcagatgtggggaactacacctgtgtggtgaccaac
actgtaaccaacaccagagtcctgggtcctcccactccactaatactgaagcatgacggt
gtaatgggtgaatacgagccaaagattgaggttcacttccccgaaacagtcccttctgcg
aaaggaacaactgtgaagctggagtgctttgccctgggcaacccagttcctactattagc
tggagaagggctgatgggaaacagatatctcgaaaggtccgcagacacaggaccagtggg
gtcctggagatcccaaactttcaacaggaagatgccggattgtacgagtgtgtggctgaa
aactctagaggaaagaacgtagcccggggtcagctgacattctatgctcatccaaattgg
atccagaaaatcaatgacgcccacattgctatagaagaaaacattttctgggagtgcaga
gcaagtgggcgtcccaagccatcctacagctggctgaagaatggccgggagctggtgacc
cgggacagagttcagatagagcatggagctctcaccatcacatcagtcaatgtttcagac
tccggcatgtaccagtgcgtggccgagaacaggcatgggacgatctatgccagtgcagag
ctgagagtcattgctgtggggcctgacttttcgaaaacatttgtgaaacggcagactttg
gcgaaagttggcggtgcggtcattgtggagtgtaagccgaaagcttctccgcgaccttct
atcacgtggaagaaagggcgggacatcctgaaggaaaatgagaggatcacagtgctggaa
gacgggagcctgcggatagccaacatcaccaagtccgacgccggggcctacacctgcatg
gccagcaaccactttggcacagccaccagcaccggcaacttggtggtgaaagatgccacc
caggtcatcgtgcccccgtccagcatggatgtgacagtgggtgaaagcattgtccttccc
tgccaggtgacccatgacgcgtccctggatgttaccttctcctgggtgttcaacggtcag
ctgattgactttgagaaggatggagaccattacgagagggttggcggagattctgcgggg
gacctgatgatcaggagcatccagctgaagcacgctggtaaatacatctgtctggtgcac
acaagtgtggacaagctgtcagccggcgcggacctggtggtgagaggtccacctggtgcc
ccggatgccctgacggtggaagagatcacagacaccactgcccagctgtcttggatgcca
ggagtggacaaccacagccccatcactgtgtatgttgttcaggcaaggactccattctct
gtggggtggcaagctgtgaacacagttccagagatcattgatggtcgttccttcacagcc
acagtggtggggttaaacccatgggttgagtatgaattccgtgtaatcgccaccaacttg
ataggaataggggagcccagtaaaccatctgacaaaagaaggactgaggaggccttgcct
gaagtaacaccagggaacgtgagtggtggtgggggcactaaatctgagctagtcatcact
tgggagcctgtgcccgaagagctgcagaacggcgggggatttggctatgtggtggcgttc
cggccctttggcactgtcagttggatgcagactgtagtagcttcatcagatgcctcgaga
tacgtcttccgaaatgagagcctaccccccttctcaccctacgaggtgaaagtaggcgtg
tacaacaaccggggcgagggatccttcagccccgttactgtggtctattcagcggaggaa
gagcccagcagagcccccccagctgtctttgccagaagtctgtcagcatcggacatggag
gtctcctgggtcgctgtgcctgagaatctgaacaaaggaaggatccagggatacgaggtt
cgatactggaggcacgatgacaaggaagagaacgccagaaaactgagaaccatcggaaat
caaacctccatcaaaatcagtaacttgaaaggcagtgagtcatatctcttagctgtcaag
gctttcaacactgctggtaccggtccgtccagtgccatcatcaatgtaacgatgcgcaag
ccaccaccaagccagccccccgggaacgtcagctggaactcctcagactccaaaatcatc
gttcggtgggaccaagttaaggctttggagaacgagtcagaagtgaaggggtataaggtg
ttttatcgctggagtaggcagagtatcacatctgttatcgaaaccaaccagacctcagtg
gagctgtcgctgcccttcgatgaagattacatcatcgagatcaagccgttcagtgaggga
ggtgatggcagaagcagcgagcaaatacgaatccccaaatcctcaaatgcctatgccaga
ggatccggagcctccacctctaacgcctgcacgctctccgcaatcagcaccataatgatc
tccctcacagccagatccagtttatga
DBGET
integrated database retrieval system
