Pleurodeles waltl (Iberian ribbed newt): 138259025
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Entry
138259025 CDS
T10800
Symbol
FGD3
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3 isoform X1
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
138259025 (FGD3)
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Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
RHG20_PH
IQ_SEC7_PH
PH_16
PH_alsin
PH_4
DUF7734
Ribosomal_L32p
Motif
Other DBs
NCBI-GeneID:
138259025
NCBI-ProteinID:
XP_069062521
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Position
9:complement(137450997..138005711)
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AA seq
946 aa
AA seq
DB search
MGKCAWKERKRQPGERFPLPFLGSGREPEPQQQFQTGRSGMTGTHSSMQLGGEGLSPAPS
QIRCHIESSSPVDAHGCFRSLSPVPCIQQSGRKPHVKPARVKPLHAQKPQVPPKPDHLKP
VNQESAFQPIPPAPSRPLPADPKSNKSPSLPKNKECSEPLPDINSLIEKFESIRQPVYIV
KRNQLNLNLKMEPGLDSSQECKSIDVNATAAKGERALAQAEPDDHQSHLVNSVELSSAEI
LKIKELDISVIKNCEDCDALDLRKEPNTEDGNGDFNEEQNGNVKMPNRDSGIDSPSCSVA
GEVFSNEDADLKTNSAVENLTDSEADKMDTIFLPSDPKRDSTQDEDSDMDEGSSEEHESA
DVPKSECLDLTKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGIPPEVTTG
IFSNISSIYRFHGQFLLPELKTRITQEWSTNPRIGDILQKLAPFLKMYGEYVKNFDRAMD
MVNTWMQRSSSFKDVIQNIQKDEVCGNLTLQHHMLEPVQRIPRYEMLLKDYLKKLPEISP
DRKDSLKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIHK
LSAKNGTTQERYLFLFNSMLLYCVPKLRLLGQKFSVRENIDIAGLQVQEIVKQNVSRTFL
IVGKKRSLELQARTEEEKKEWVQVIQATIEKHKQNSETFRAFNSSFSREEELPPDSSVLS
TGSLEYMPGTDVCSSSGGGDALKKSKLRRDKEKQSCKSCNETFNSITKRRHHCKQCGCVI
CGKCSEFKPLADNSRHNRVCKECFQLSSAVPGSPGADIIGEYKKKAALEKQASLATENSL
FCSNLLLLDKGKTWHRVWVAIPRSEPLVLYVQGSVQDGRMTRAIPLPGYEVSLPSATEKH
EMKYVFKLSQSQQNIVFSAEDEDMLTKWLEILTKVAKGDNAEIENP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtgcgcctggaaggagaggaaaaggcagccaggcgagcggtttcctcttcct
tttttgggatcaggacgggagccagagccgcagcagcagtttcagacaggaaggagcggg
atgactggaactcacagcagtatgcagctggggggcgagggtctctctcctgctccttcg
caaatcagatgtcacattgagtcaagctcccctgtggacgcgcatggctgttttcggagc
ctcagcccagtaccatgtattcagcaaagtggaagaaagccccatgtcaaacctgcacga
gtcaaaccactgcatgctcagaagccccaagtacctcctaaacctgatcatctgaaaccg
gtgaaccaggagtcagcatttcagccaattcccccggcaccttctcggccattaccagcc
gaccctaaaagtaacaagagcccatcgctccccaagaacaaggaatgctccgaacctttg
ccagacatcaacagccttattgaaaaatttgaaagtattcggcaaccagtgtacattgtc
aaaagaaaccagttgaacttaaatcttaagatggaacctggattggactcttcacaagag
tgtaaatctattgatgttaatgcaacagctgccaaaggagagcgagcgctggctcaggct
gaacctgatgatcatcagtcacatttagtgaacagcgtggaactctccagtgcggagatc
ctaaaaattaaagagctggatataagtgttataaaaaattgtgaggattgtgatgctctg
gatttaaggaaagaacctaacacagaagatggtaatggtgacttcaacgaagagcaaaac
ggaaatgtaaaaatgcccaacagagacagtggaattgacagtccttcatgtagcgtggct
ggagaggttttttcaaatgaagacgcagacctgaaaacaaacagtgctgttgagaatttg
acagactctgaagctgacaaaatggatacaatttttctaccttctgatccaaaaagagac
tccacacaagatgaggacagtgatatggatgaaggtagcagtgaagaacatgagtctgcg
gacgtgccaaagtctgagtgtttagatctaactaagtgtacagaacctcagaaactattc
aacattgcaaatgaacttctccacacagaagaagcatatgtcaaaagattacatctactg
gaccaggttttttgcacaaaactctcagaggctggtataccccctgaagtgactactgga
atcttctctaatatttcctcaatctatcggttccatggacagtttctcctgcctgaactg
aaaacacgaattacgcaagaatggagtacaaatccccgcataggagatatccttcagaag
cttgcaccttttttgaagatgtacggcgagtatgtaaagaactttgacagagccatggac
atggtcaacacatggatgcagagatcctcatcatttaaggatgtcattcagaatattcag
aaagatgaagtgtgcgggaacctgacattacagcatcatatgcttgagcctgtgcaaaga
attccccgttatgaaatgctgcttaaagactacctaaagaaacttccagagatttctcca
gacaggaaagattctttaaaatcattggagttaatttctactgcagcaaaccattcaaat
gccgccattagaaagatggaaaagatgcacaagttgctcgaagtatacgaaagacttggc
ggtgaagaagatatagtgaatccagccaatgaactcatcaaagaaggtcacattcacaaa
ctctcggccaagaatggcacaacgcaagaaaggtatttatttctgtttaacagtatgctg
ctctattgcgttccaaaactgagactccttggccagaagtttagtgtacgagaaaacata
gatattgcaggtcttcaggtacaagaaattgtcaagcaaaatgtgtctcgcactttctta
attgttggaaaaaagcgttcgctggaattacaagcaagaacagaagaagaaaagaaagaa
tgggttcaggtaattcaggcaactattgagaagcacaaacaaaacagtgaaacattcaga
gcttttaacagttctttttcaagggaagaggaactacctccggactcctctgtattaagc
acaggttctttagaatatatgcctgggaccgacgtatgcagttcatctggtggaggtgat
gctttgaaaaaatcgaaattaaggcgagacaaagaaaaacaatcatgcaagagctgcaac
gaaacctttaattctattacaaaaaggcgacatcactgcaaacagtgtggatgcgttatt
tgtggaaaatgctctgaatttaagccacttgcagacaacagtcgtcataatcgcgtttgt
aaggaatgtttccagttgtcttcagctgttccaggcagcccaggagctgacattattggt
gaatacaagaaaaaagcagccctggagaagcaagcctctttggcgacggaaaacagcctt
ttctgcagcaaccttctgttgttagacaaaggaaaaacgtggcatagagtgtgggtagcg
attccacggagcgagcccctggtgctttacgtacaaggaagtgttcaggatgggcgcatg
actcgtgcaataccattgcctgggtatgaagtgagcttgccaagtgccactgaaaaacat
gaaatgaagtatgttttcaagctgtcccagtctcagcagaacatagtcttcagtgctgaa
gatgaagacatgctcacaaagtggctggagatactcaccaaagtggccaaaggagataat
gcagaaattgaaaacccatag
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