Pleurodeles waltl (Iberian ribbed newt): 138259283
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Entry
138259283 CDS
T10800
Symbol
NFKBIB
Name
(RefSeq) NF-kappa-B inhibitor beta isoform X1
KO
K02581
NF-kappa-B inhibitor beta
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04621
NOD-like receptor signaling pathway
pwl04622
RIG-I-like receptor signaling pathway
pwl04623
Cytosolic DNA-sensing pathway
pwl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138259283 (NFKBIB)
04622 RIG-I-like receptor signaling pathway
138259283 (NFKBIB)
04623 Cytosolic DNA-sensing pathway
138259283 (NFKBIB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
138259283 (NFKBIB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138259283 (NFKBIB)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
138259283 (NFKBIB)
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Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
138259283
NCBI-ProteinID:
XP_069063002
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Position
9:341617242..341680680
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AA seq
372 aa
AA seq
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MSGKRLDEDCCDSGLGSLLEGQLLSLPGSQYSLGCLPITDNWEREIRSPKSSDSLARAEE
PLWIRDPKPWGDEQTPKVSAEQEFERFDSALGDSLRDEDVAVVELGGLVQDIRLEQHTDP
EHWAAGVCGYLSDEGDTALHLAVIHEHEAFLDAVLQYMGKTEFLDLQNDLGQTALHIAVI
IGLPVFTSKLILAGASLCIPEKAGNTALHLACKEGRYDCAKVLLLHTTGNFNDIQKLLDC
TNYDSFTALHIAVIRKDLEMVKLLLDSGADLNKPELSCGRSPLHLAVESQCPEVVECLLR
AGANKDAQMYVGYTPLYSAMYRQDNSILQLLRRYGSREPEWDSDESLDMSSDEEEQDTTY
DDFVINSIQCKN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaacggcttgacgaggattgttgcgatagcggccttggctccttgttggag
gggcagctattgagtcttcccgggagccagtactcccttgggtgtctcccgatcacagat
aactgggagagagaaatccggagtccaaagtcttctgattctttggcaagggctgaggag
cctctgtggataagggacccaaagccttggggtgacgaacagacccccaaagtctcagcg
gaacaggagttcgaacgctttgactctgctttgggcgattcgttacgggatgaggatgtg
gctgtcgtggagctggggggtctagtgcaggatatacgcttggagcaacacacagaccct
gaacactgggccgcgggagtctgtgggtatctatcagacgagggagacacagctcttcac
ttggctgttattcatgagcatgaagccttcctggatgctgttctgcagtacatggggaaa
actgaattcctagacctacagaatgatttgggacagactgctcttcacattgctgtcatc
attggactgcctgtattcaccagcaagctgatcctggctggggccagcctgtgtattcca
gaaaaagcaggcaacacagctctgcacttggcctgcaaagaagggagatacgactgtgca
aaagtgctcttgttgcacacgactggcaatttcaatgatatccagaaacttttggactgc
actaactatgacagtttcactgccttacacattgctgttatccgcaaagacttggagatg
gtgaaactgctgctggattcaggagctgacctgaacaaaccggaactgagctgtggcaga
agtcccctccatttggcagtggaatctcagtgccctgaagtggtggaatgtctgttgcga
gctggggcaaacaaggatgcccagatgtatgttggctacacccctttgtatagtgccatg
taccggcaggacaacagcattcttcagctgctgaggcgttatggatccagagagcctgag
tgggactctgatgagagtttggacatgagcagtgatgaggaggagcaggatacaacctat
gacgactttgtgattaacagtattcagtgtaagaactga
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