Pleurodeles waltl (Iberian ribbed newt): 138259433
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Entry
138259433 CDS
T10800
Symbol
TAF6L
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138259433 (TAF6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138259433 (TAF6L)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138259433 (TAF6L)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138259433 (TAF6L)
Coactivators
SAGA/TFTC/STAGA complex
138259433 (TAF6L)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
138259433 (TAF6L)
STAGA complex
138259433 (TAF6L)
TFTC complex
138259433 (TAF6L)
SAGA complex
138259433 (TAF6L)
SLIK complex
138259433 (TAF6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
138259433
NCBI-ProteinID:
XP_069063279
LinkDB
All DBs
Position
9:411869670..412048436
Genome browser
AA seq
671 aa
AA seq
DB search
MAPPLPDTTACKADLTEFIISLIWFGLKYEEKPVPSWTLIFQNIVPPKKGGADAMSEREE
RRFVELPRESVKLMAESVGVDLADDVAAMLAEDVCYRLREATQNSSQFLKHAKRRKLTVE
DFNRALRWSNVEAVCGYGSQDVLPFRAIKDGEHFFVEDREVNLVELALATNIPKGCAETA
VRVHVSYLDGKGNQESQGTVPSAVSVLSDDLLKYYQQVTRAVLGDDPQLMKVALQDLQTN
SKIAALLPYFVYVVSGVKSVSHDLEQLNCLLHMVRSLVQNPYLYLGSYVKSLISSVMYCA
LEPLAASINPLNDHWTLRDYAAILLSHIFWTHGDLVSGLYHQILLSLQKVLVDPVRPLCS
HYGAVVALHALGWKAVECVLYPHLATYWPNLQTVLDDHSVSNAQVKADGHKVYGAILVAV
ERLLKMKALSQHPAKENAQLDHRRRESSPRLSPLQDPQAEFGFGVASHLLQPGASIASDP
PSTSLREMYQELYDFFGDSLSMRFGTGLGLQPAEKSLQDPKPPDVKKDPGPFGGPGGDSV
RKMPQLTANATVSPRDAESPKSDHTPGRTVAPRSTSVPRSRSISRQGHRGAGVREVFQKS
RFSPRAPHFSFVIAGRQMGRRCKGRVFQTAFPQHHGPSHVSRYAQKLPMIGRTSKPVKKW
TQSETSLYLPL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctctacctgatactacggcctgcaaagctgatttaactgaatttatcatt
tcacttatttggttcggactgaagtatgaagaaaagccagttccttcatggactctgatc
ttccagaatatcgtcccaccgaagaagggtggcgcagacgccatgtcggagcgggaggag
cggcgcttcgtggaactcccccgcgagtcggtgaagctgatggccgagagtgtgggcgtg
gacctcgccgatgacgtggcagccatgctagccgaggacgtttgttaccgcttacgggag
gccactcagaacagctctcagtttctgaaacatgctaaaagacgaaaactgactgtagaa
gatttcaacagagcccttcgttggagcaatgtggaggcagtgtgtggctatggctcccag
gatgttcttccctttcgtgcgatcaaggatggagagcatttcttcgttgaggaccgagaa
gtgaaccttgtggagctggcactagccacgaacatccccaagggctgcgcagagactgca
gtgcgagtgcatgtctcctacctggatggaaaaggaaatcaggagtcccaaggaactgtt
cccagtgctgtctcagtgctgtccgatgatctgctaaaatattaccaacaagtcacccgt
gctgtgctaggagatgacccccaacttatgaaggtcgccttacaagacttacaaaccaac
tcaaagattgcagccctgctcccatactttgtctatgtcgttagtggggtgaagtcagtg
agccatgacctggagcagttgaattgcctcctgcatatggtgcggagcctggtgcagaac
ccctacctttacttgggttcttacgtgaagagcctcatatctagcgtcatgtactgtgcc
ctggagcctcttgccgcctccatcaaccctctgaatgaccactggactctgcgtgactat
gctgctattctgctcagtcacatcttctggacccatggtgatctagtcagtggcctgtac
catcagatcctgctctcattacagaaagtgctagtggacccggtacgcccactgtgctct
cactatggggctgtggtggcgctccatgcactaggctggaaggctgtagagtgtgtcctg
tatcctcacctcgccacgtactggccaaacctgcaaaccgttctggatgatcactctgta
tccaacgcccaggtgaaggcagatgggcacaaggtgtatggagctattctggtggcagtg
gaacgcctactgaagatgaaggcactttctcagcatccggccaaggagaatgcacaactg
gaccaccgacggcgagagagctctcctcggctcagtcctctccaggacccacaggcagaa
tttggctttggagtcgccagccacctgctccaacctggtgcgtccattgctagtgatcct
ccatccacctcgttgcgtgaaatgtaccaggaactctatgacttctttggagatagcctc
tctatgcgcttcggcacaggtctaggcctacagccagcagagaaaagcctgcaagatcct
aagccacctgatgtaaagaaagatccaggaccatttggtggtccgggaggagattctgtg
cgcaagatgccacagctgacggccaatgccaccgtcagcccccgggatgcagagagccca
aagtcagaccacacaccaggtaggacagttgctcctcgctcaaccagtgtgccacgctcc
cgcagcatctcccgccagggtcaccgtggagctggtgttcgtgaagtattccagaagtca
cgtttctctcctcgtgcacctcacttcagctttgtaattgctgggaggcagatgggacgc
cgatgcaagggtcgtgtctttcagacagcattccctcagcaccacggccccagccacgtc
tcccgctatgcccagaagctacccatgattggccgaaccagtaagccagtgaagaagtgg
actcaatccgagacatccctatacttgcccctctga
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