Pleurodeles waltl (Iberian ribbed newt): 138259458
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Entry
138259458 CDS
T10800
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04517
IgSF CAM signaling
pwl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138259458 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138259458 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138259458 (SPTBN4)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138259458 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
138259458 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
PH_17
Motif
Other DBs
NCBI-GeneID:
138259458
NCBI-ProteinID:
XP_069063317
LinkDB
All DBs
Position
9:complement(419124918..420777411)
Genome browser
AA seq
2608 aa
AA seq
DB search
MANVTAELDNMEVQEQPNNNNWETTDHLWDECTATSKLFECSRIKALSDERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTKLLEVLSGEQLPKPTRGRMRIHSLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQMIKIETDDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHKHRPDVINFSKLTKSNVTYNLQQAFNTA
EQHLGLTKLLDPEDVNMENPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQVIDTE
KITDKYEMLASELLEWIKNTISAISNQKFANSLPGVQQQLQAFTTYCTMEKPVKFQEKGN
LEVLLFTIQSKMRANNRKLYVPTEGKTISDINKAWKRLEKAEHEREVALRHELIRQEKLE
LLAQRFDHKAIMREAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVV
VELAQEMENESYYDIKRINAQKDNTLRQWKLLTDLLTARRVRLEQNVALQNIFQEMVYMI
DWMEEMQALVVSKEYGKHLLEVEDLLQKHSLLEADIAAQTERVRSLNEAALKFTEIEGYL
PCDPQVICNRVHHVKTCLEGLCELATKRRNELEDSRQLWTFFQEVEEAESWIREKEQILS
AKNHGKDLSGVIRLMNKHKILIGELGGRRSLLQQTMKKGEQILAKKRLRGSNIQERTREV
KMRWKKLEEVSTIHQQKLQEALNFHQFSSDTDDLVAYLQDTYRLVSSDDFGHDEYSTQSL
MKKHKGLAEEIEKHRSAVLALRMHLSALAPEYRDMVDVQIRIVEVEQLYSEVAEVAVLRR
QWLQDALAVYRMFSEVNACEVWIDEKEQWLNKMEIPEKLEEVEVVQHRFESLDQEMNSLM
GRILDVNQVVQQLVDGGHPSASEVRACQDHLNSRWNRIVELVEQKKENLNSILRIQNYLL
ECNETKSQIREKRKAIESTQYNSSDMGGVLSLQRKLSTMEAALVAIAPKLIELQQDAEAL
ANTHPAQAMEILLQFEQISEEWEALKRTLQGCEDSLTVATRLQQFIQDLDSFLTWLVKTQ
TAVASEELPNNLAEAEKLLNQHAALKEDINHYEEDYNKIQAVHDLLALEEADIPYLSLQQ
WLQKLDVGWNKLLQMWESRREVLVQSHIFHLFLRDVKQAEACLNNQESTLAHVELPNTVE
TVEAAMKKHKNFLTTIELNKQKINLAIDAGESLIRLGNFYSDKVLERIKIIKKRSLRNCA
LAIQWLQRLNDHLALQKFLQNCDELDSWINEKMLTAKDTSRDEAQKLHKKWLKHQAFMAE
LGQNREWLDKIEKAESGDTVKKEGHQLIQEKPELASVVTRKLEDIRQCWVELETTTQAKA
RQLFDANKADQLVQSYADLDKRLLNLEGDLHSVDPGPDMVSVNNQLKKLQAMESQMEEWY
KEVGELQAQISSLPLDTSSKELVNDKQNVVGTRIVRLIEPLKERRRILLASKEVHQISHD
LEDEIFWVQERLPLATLKEYGSNLQAVQQFIKKNQNLRREIQVHSPRVEDVLERAGAIAT
IKSPEVEPVRENFEKLRELWVALREQTERRQQLLDASYQVEQYYFDVAEVESWLSEQELL
MMNDQKGKDEQGTLQMLKKHLMLEQTIENYEETIATLSRQCRSLLELGHPDSEQISKRQS
QIDRLYVSLKDLVEERRVKLEQQYWLFQLNREVDELEHWIAEKEVVAGSPELGQDYEHVT
LLQEKFTEFASETGSLGHERISAVNHMVDELIDYGHSDAATIAEWKDGLNEAWADLLELI
ETRAQMLSASHELHTFFNDCKEVLSQIEEKKQRLPEVTSRESKTSAGTLQRMLHSFEHDV
QVLVTQVRQLQENAAQLRTVYAGENAEAIASKEQEVMRSWKELLSSCEDCRLQITTTTDK
IRFLGMVRDLISWMESIICQIEAAEKPRDVSSVEVSMSYHQGLKNEIESRNKNIVSCVDM
GKTLVLNKSPAAEEIKENLEKLMAKKKEMIEKWDKHWEWLQQMLEVHQFAQEAVVADAWL
TAQEPIIKSSELGNSVDEVEQLIRRHEAFRKTAAAWEERFSSLRRLTTLEKVKAEQSKQP
PTPLLGRKFLTDPGDLTPAKAAVPVFRPSAYEKPDSKLDRKDLIKTLEPQPFLNGVKHEG
NELKPEIVEPKIAYVRQELKPERLQPKIDHVQDSLQPTMGHKTSNLKEKVEAKSLTYSGL
KTDRVDSKLTPHLAVPEGLSVSFEQTEAKSGRGEPHAERRRDRHERRQEKQESSDHDTPR
QEQPERKRDRHERRLERQEAEEQETTKPESSEKKRERHERRFERQGSSEQETPKQEQSER
KRERHERKLERQESSEHETPRNDPSDKKGGKATLADIVEQLQEKEAAQVREKDAPSRMPN
GIDKLPERTTRPDRPRARDRPKPRRRPRPKDPNQPPGEARRSRSAPAQTNVPLLPPPTHT
VQQEGLLLRKHELEGPNKKASNRSWVNLFCVLSKGDLGTYKDSKSQSSGTTYGGEALISL
HNAVCEIANDYKKKKNVFKLRTSDGNEFLFQAKDEEEMKNWIRAIATSASEHAEIAKWGQ
SLLTTSSTDESNLKRESDRRPSGSGKKK
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtcacagctgaattggataacatggaggtgcaggaacagcccaacaacaat
aactgggaaactacagatcatctctgggatgaatgtacagctacatccaagctttttgaa
tgctccaggatcaaagccttatctgatgagcgggatgctgtgcagaagaaaaccttcacc
aagtgggttaactcgcatctggcccgagtctcgtgtcgaataagtgacctgtacaatgat
ctgagggatggatacatgttgacaaagctgctggaggtgctttctggagaacagctgcca
aagccaacacggggaaggatgagaattcactcgctggagaatgtggacaaagctctgcag
ttcctgaaggagcaacgcgtgcacctagagaatgtgggatcccatgatattgtcgacggg
aaccaccggcttaccctgggacttatctggaccatcatcctgaggtttcagattcagatg
ataaaaatcgaaaccgatgataatcgagagacccgctctgccaaggatgcccttctactg
tggtgccagatgaaaactgctgggtaccctgaagtcaatattcagaattttaccaccagc
tggagagacggcttggccttcaacgctctgattcacaagcacagaccagatgtcatcaat
ttcagcaaactgaccaaatccaatgtgacatataacctccagcaagctttcaacactgct
gagcagcacctaggtcttaccaaacttctggatcctgaagatgtaaacatggaaaatcct
gatgagaaatccattattacatatgttgtgtcattctatcattacttctcaaaaatgaag
gcccttgctgtggaagggaaacggatcggaaaggtcttggaccaggtcattgacacagag
aagataactgataagtatgagatgcttgccagtgagctcctagaatggatcaagaacacc
atcagcgcaatcagcaatcagaagtttgccaattcactgccaggggtgcagcagcagctg
caggccttcacaacctattgcacgatggagaaacctgtgaaatttcaggagaagggaaac
ctggaagtcctactattcacaatccaaagcaaaatgcgagccaacaaccggaagctgtat
gttcccactgagggaaagactatttcggatattaataaggcttggaagcggctggagaaa
gctgagcacgagcgggaggtagctttgcgtcatgagctgatccgacaggagaaacttgaa
ctgctggctcagcgatttgatcacaaagccatcatgagggaggcttggctgaatgagaac
cagaggctcgtttctcaggacaactttggctatgatttgccagccgtggaagccgcaatg
aagaagcatgaggcgattgaggcagatatctcttcctatcaggagcggatccaggtggtg
gtggagttggctcaggaaatggagaacgagagctattatgatatcaagcgtatcaatgcg
cagaaggacaacaccttacggcagtggaaactcctgactgacctgctgactgcacggcga
gtccgcctggagcagaatgtggcccttcagaacattttccaggaaatggtctacatgatt
gactggatggaagagatgcaggcgctggttgtatccaaagagtacgggaagcatttgctg
gaagtggaagaccttctccagaaacatagcttactggaagctgacatcgctgctcagact
gaaagggtccgcagcctcaatgaggcagctctcaagttcaccgaaatagagggttacctg
ccatgtgacccacaagtgatctgtaaccgtgtacaccatgtgaagacctgcctggagggg
ctctgtgagctggccactaagagacggaacgagttagaggactcccgccaactgtggact
ttctttcaagaggtagaagaggcagaaagctggatccgagagaaagagcagatcctttct
gccaaaaaccatgggaaggacctgagtggggtcatcaggctcatgaacaaacataagata
ttgattggagagctgggtgggcggcgctctctcctacaacagaccatgaagaaaggggag
cagatcttagctaagaaacgtctcagaggtagcaacatccaggagagaaccagggaggtc
aagatgaggtggaagaagctggaggaagtttctactatccaccagcagaagctccaagag
gctttgaactttcaccagtttagctcagacacagatgacctcgtagcctatctgcaggac
acttaccgtcttgtctcaagtgatgactttgggcatgatgaatactccactcagtccctc
atgaagaagcacaagggactggctgaggagatcgagaagcatcgctctgctgtcctagcc
ttgaggatgcacctgtctgctctggctcctgagtaccgggacatggtggatgttcagata
aggatagtggaggtggagcagctatatagcgaagtggctgaggtggccgtactacgaagg
caatggctgcaggatgccctggctgtctacaggatgtttagtgaggtgaacgcctgtgag
gtgtggatagatgagaaggagcaatggttgaataaaatggagatcccagagaagttagaa
gaggtggaggtcgtacagcacaggtttgaaagtctggaccaggagatgaacagcttgatg
ggacgcatcctggatgtgaatcaggttgtgcagcaattggtggatggtggtcatcccagc
gcctctgaggtccgggcttgccaggaccacttaaacagcaggtggaaccgcattgtggaa
cttgtggagcagaagaaggagaacctgaactccatcctccggatccagaactatttgctg
gaatgcaatgagaccaagtctcagatccgtgaaaagcgaaaagccattgaatctacacag
tacaacagcagtgacatggggggtgttctatctctgcagaggaagctctccactatggaa
gctgccttggtggccattgccccaaagctgattgagctccagcaagatgcagaggctctg
gccaacactcatccagcccaagccatggaaatcctcctgcaattcgagcaaatcagtgaa
gagtgggaggccttaaagcgtaccctgcagggctgtgaggactctcttactgtggccact
cggctacagcagttcattcaggatctggacagcttcttgacctggttggtcaagacccag
acggccgtagcctcggaagagctgcccaacaacctggcagaggctgagaagcttctcaac
caacatgctgccctaaaggaggacatcaaccactatgaggaagattacaacaagatccaa
gcagttcatgacttgctagccttggaggaggccgacatcccatacctttctctacaacaa
tggcttcaaaaacttgatgtcggctggaacaagctgttacagatgtgggagagccgacga
gaggttctggtgcagtcacatatctttcatctttttttgcgagatgttaaacaagctgag
gcctgtctaaacaatcaggaatctaccttggctcacgttgaactgcccaacacggtggag
accgttgaagctgccatgaaaaagcacaagaatttcctcaccaccattgaactgaataag
cagaaaatcaacttggcgattgacgctggtgagagcctcattcgcctgggaaacttctac
tcagacaaggtgttggagcggatcaaaataataaaaaagaggagcctacggaattgcgca
cttgccattcagtggttgcagcgactgaatgaccacttggcactgcagaagttcttgcag
aactgcgacgagctggactcatggattaacgagaagatgctcactgccaaggacacgtcc
agggacgaggcgcagaaactgcacaagaaatggctgaagcaccaggcgttcatggcggag
ctgggccagaaccgggagtggctggacaagatcgaaaaggccgaatctggggacacagtg
aagaaggaaggtcaccagctcattcaagagaagccagagttagcaagtgtggtgacgcgg
aagttggaggacatccggcaatgctgggtggaactagagactaccacgcaagctaaggcc
agacagctttttgatgccaacaaagctgatcagctagtccagagctatgctgatctggat
aagaggcttctcaacctggagggtgatctgcatagtgtggatcctggccctgacatggtc
agtgtcaacaaccagctgaagaaactgcaggcaatggaatcccagatggaggagtggtac
aaggaggtgggggagttgcaggcccaaatttcatcccttccactggatacctccagcaag
gagctggtgaatgataagcagaatgttgtggggacccgcattgtgcgccttatcgagcca
ctgaaggagaggaggcgaatcctgctggcttctaaggaggtccatcaaatcagccatgat
ctggaagatgagattttctgggttcaggaaaggctccctcttgccactttgaaagaatat
gggagtaacctgcaagctgttcaacagtttataaagaaaaaccagaatctgcggcgagag
atccaagtgcacagcccacgagtggaggatgtgctagagcgggcaggagccattgcaacc
atcaagagcccagaggtggaacctgtgcgtgagaactttgaaaagctgagagagctgtgg
gttgctctgcgagagcagacagaacggcggcagcaactgctggatgcttcctaccaggtg
gagcagtactatttcgatgtagcagaggtggagtcgtggttgagcgagcaggagctgctg
atgatgaatgaccaaaagggaaaggatgagcagggcactttacagatgctgaagaagcac
ttaatgctggagcagacgattgagaattacgaagagaccattgccactctgtctcggcag
tgcaggtctctactggagctgggccatcctgacagcgagcagataagtaaacgtcagtct
cagattgaccggctctacgtgtctctgaaggacttggtggaggaacgacgggtgaagttg
gagcaacagtactggctcttccagttgaaccgtgaggtggacgagctggagcactggatc
gctgaaaaggaggtggtggctggatcaccagagcttggacaggactatgaacatgtcacg
ttacttcaggagaagttcacagagtttgccagtgaaacggggagccttggacatgagcgg
atctctgctgtgaaccacatggtggatgaacttattgactatggccattctgatgcagca
acaatcgctgagtggaaagatgggctcaacgaggcctgggcagacctgctggaactaata
gaaaccagggcccagatgctgtctgcttcccacgaactgcacacattttttaatgactgc
aaggaagtcctgtcgcagattgaagagaagaagcagcgccttcctgaggtgacctctcgg
gagtcgaagacctctgctggaactctacagagaatgttacattcgtttgagcatgatgtt
caggtattggttacccaggtacggcagctgcaagagaatgcggcccagctgcgtacggtt
tatgctggagagaatgcagaagctattgcctccaaagaacaagaagtgatgcgttcatgg
aaggaactgctaagctcctgtgaggactgcagacttcagatcactaccactacagacaaa
atccggtttctggggatggtgagggaccttatctcatggatggagagcatcatctgtcag
atcgaagcagcagagaaacccagggatgtatcttctgttgaagtgtcgatgagttatcac
caaggtttgaagaatgaaatagagtcccgcaataaaaatattgtttcttgtgtggatatg
gggaagaccttagtgctgaacaaaagcccagcagctgaagagattaaggagaaccttgaa
aaattgatggcaaagaagaaagagatgatagagaagtgggacaagcactgggagtggctt
cagcagatgctggaggtacaccagtttgcccaggaagcagttgtagctgatgcatggcta
acagcccaggagccaattataaagagcagtgagttggggaacagtgtggatgaggtggaa
cagctaattcggcggcatgaggccttccgcaaaactgctgctgcttgggaagaacgcttc
agctccctgagacgcctaaccacacttgaaaaggtaaaagcagaacaaagtaagcagcct
ccaactccacttcttgggcgaaagtttttgacggacccaggagatcttacaccagctaag
gctgctgttccagtatttcgcccatctgcttatgaaaagcctgactccaagttagaccgt
aaggatctaatcaagacattggagccacaaccttttctcaatggagttaaacatgagggt
aatgaactgaagcctgaaatagtggaacccaagattgcatatgtgcggcaagagctcaaa
ccagagcgtttgcaaccaaaaatcgaccatgtccaagacagtcttcagcccactatgggg
cacaaaacctcaaaccttaaagaaaaggtagaggcaaagtctctgacttattcagggctt
aaaactgatagggtagactcaaaacttactccacaccttgcagtgccggagggactcagt
gtgagttttgaacaaactgaggccaaaagtgggcgtggagagccacatgcggaaaggcgg
cgtgatcgccatgagcggaggcaggaaaagcaagaatccagcgatcatgacactcctcgc
caagagcaaccggagaggaagcgagatcgtcatgaaaggagactggaaaggcaagaggca
gaagagcaggagaccacaaaaccagagtcatcagaaaaaaagcgagaacggcatgagagg
aggtttgaacgacaaggttcaagtgagcaggagaccccaaaacaggaacaatcagaaagg
aagagggaacgccatgaaaggaaattggagaggcaggagtctagcgagcatgagactcca
cgcaatgatccatctgacaagaaaggagggaaagctaccttggcagatattgttgagcag
ctgcaagaaaaggaagcagctcaggtgcgtgaaaaagatgccccatctcgtatgccaaat
ggcattgacaagctcccagagagaacaacaaggcctgaccgaccacgggccagagatcgt
ccaaagccaagaagacgaccacgccccaaagatcccaaccagcctcctggagaagcccga
aggtctcgctcagcgccagctcagactaatgttcctctgctgccacccccaactcacact
gtccagcaggaaggccttctactccggaagcatgaactcgagggaccaaataagaaggcc
tccaacaggtcctgggtaaacttgttctgtgtgctcagcaagggtgatcttgggacatac
aaggactccaagagccagtcctctgggaccacctatggaggtgaagccttgattagcctg
cacaacgcagtctgtgaaatcgccaatgactacaagaagaagaagaatgtgtttaaactg
aggacaagtgatggcaacgaatttctcttccaagcaaaggatgaggaggaaatgaaaaac
tggatccgagccatcgccacttcggcctctgagcatgctgaaattgccaaatggggccag
tccctcctcactacctcttccacggatgaaagcaacctgaagcgggagtctgatcgcagg
cctagcggttcaggaaagaagaagtga
DBGET
integrated database retrieval system
