Pleurodeles waltl (Iberian ribbed newt): 138259458
Help
Entry
138259458 CDS
T10800
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04820
Cytoskeleton in muscle cells
Brite
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138259458 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
138259458 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
PH_17
Motif
Other DBs
NCBI-GeneID:
138259458
NCBI-ProteinID:
XP_069063317
LinkDB
All DBs
Position
9:complement(419124918..420777411)
Genome browser
AA seq
2608 aa
AA seq
DB search
MANVTAELDNMEVQEQPNNNNWETTDHLWDECTATSKLFECSRIKALSDERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTKLLEVLSGEQLPKPTRGRMRIHSLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQMIKIETDDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHKHRPDVINFSKLTKSNVTYNLQQAFNTA
EQHLGLTKLLDPEDVNMENPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQVIDTE
KITDKYEMLASELLEWIKNTISAISNQKFANSLPGVQQQLQAFTTYCTMEKPVKFQEKGN
LEVLLFTIQSKMRANNRKLYVPTEGKTISDINKAWKRLEKAEHEREVALRHELIRQEKLE
LLAQRFDHKAIMREAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVV
VELAQEMENESYYDIKRINAQKDNTLRQWKLLTDLLTARRVRLEQNVALQNIFQEMVYMI
DWMEEMQALVVSKEYGKHLLEVEDLLQKHSLLEADIAAQTERVRSLNEAALKFTEIEGYL
PCDPQVICNRVHHVKTCLEGLCELATKRRNELEDSRQLWTFFQEVEEAESWIREKEQILS
AKNHGKDLSGVIRLMNKHKILIGELGGRRSLLQQTMKKGEQILAKKRLRGSNIQERTREV
KMRWKKLEEVSTIHQQKLQEALNFHQFSSDTDDLVAYLQDTYRLVSSDDFGHDEYSTQSL
MKKHKGLAEEIEKHRSAVLALRMHLSALAPEYRDMVDVQIRIVEVEQLYSEVAEVAVLRR
QWLQDALAVYRMFSEVNACEVWIDEKEQWLNKMEIPEKLEEVEVVQHRFESLDQEMNSLM
GRILDVNQVVQQLVDGGHPSASEVRACQDHLNSRWNRIVELVEQKKENLNSILRIQNYLL
ECNETKSQIREKRKAIESTQYNSSDMGGVLSLQRKLSTMEAALVAIAPKLIELQQDAEAL
ANTHPAQAMEILLQFEQISEEWEALKRTLQGCEDSLTVATRLQQFIQDLDSFLTWLVKTQ
TAVASEELPNNLAEAEKLLNQHAALKEDINHYEEDYNKIQAVHDLLALEEADIPYLSLQQ
WLQKLDVGWNKLLQMWESRREVLVQSHIFHLFLRDVKQAEACLNNQESTLAHVELPNTVE
TVEAAMKKHKNFLTTIELNKQKINLAIDAGESLIRLGNFYSDKVLERIKIIKKRSLRNCA
LAIQWLQRLNDHLALQKFLQNCDELDSWINEKMLTAKDTSRDEAQKLHKKWLKHQAFMAE
LGQNREWLDKIEKAESGDTVKKEGHQLIQEKPELASVVTRKLEDIRQCWVELETTTQAKA
RQLFDANKADQLVQSYADLDKRLLNLEGDLHSVDPGPDMVSVNNQLKKLQAMESQMEEWY
KEVGELQAQISSLPLDTSSKELVNDKQNVVGTRIVRLIEPLKERRRILLASKEVHQISHD
LEDEIFWVQERLPLATLKEYGSNLQAVQQFIKKNQNLRREIQVHSPRVEDVLERAGAIAT
IKSPEVEPVRENFEKLRELWVALREQTERRQQLLDASYQVEQYYFDVAEVESWLSEQELL
MMNDQKGKDEQGTLQMLKKHLMLEQTIENYEETIATLSRQCRSLLELGHPDSEQISKRQS
QIDRLYVSLKDLVEERRVKLEQQYWLFQLNREVDELEHWIAEKEVVAGSPELGQDYEHVT
LLQEKFTEFASETGSLGHERISAVNHMVDELIDYGHSDAATIAEWKDGLNEAWADLLELI
ETRAQMLSASHELHTFFNDCKEVLSQIEEKKQRLPEVTSRESKTSAGTLQRMLHSFEHDV
QVLVTQVRQLQENAAQLRTVYAGENAEAIASKEQEVMRSWKELLSSCEDCRLQITTTTDK
IRFLGMVRDLISWMESIICQIEAAEKPRDVSSVEVSMSYHQGLKNEIESRNKNIVSCVDM
GKTLVLNKSPAAEEIKENLEKLMAKKKEMIEKWDKHWEWLQQMLEVHQFAQEAVVADAWL
TAQEPIIKSSELGNSVDEVEQLIRRHEAFRKTAAAWEERFSSLRRLTTLEKVKAEQSKQP
PTPLLGRKFLTDPGDLTPAKAAVPVFRPSAYEKPDSKLDRKDLIKTLEPQPFLNGVKHEG
NELKPEIVEPKIAYVRQELKPERLQPKIDHVQDSLQPTMGHKTSNLKEKVEAKSLTYSGL
KTDRVDSKLTPHLAVPEGLSVSFEQTEAKSGRGEPHAERRRDRHERRQEKQESSDHDTPR
QEQPERKRDRHERRLERQEAEEQETTKPESSEKKRERHERRFERQGSSEQETPKQEQSER
KRERHERKLERQESSEHETPRNDPSDKKGGKATLADIVEQLQEKEAAQVREKDAPSRMPN
GIDKLPERTTRPDRPRARDRPKPRRRPRPKDPNQPPGEARRSRSAPAQTNVPLLPPPTHT
VQQEGLLLRKHELEGPNKKASNRSWVNLFCVLSKGDLGTYKDSKSQSSGTTYGGEALISL
HNAVCEIANDYKKKKNVFKLRTSDGNEFLFQAKDEEEMKNWIRAIATSASEHAEIAKWGQ
SLLTTSSTDESNLKRESDRRPSGSGKKK
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtcacagctgaattggataacatggaggtgcaggaacagcccaacaacaat
aactgggaaactacagatcatctctgggatgaatgtacagctacatccaagctttttgaa
tgctccaggatcaaagccttatctgatgagcgggatgctgtgcagaagaaaaccttcacc
aagtgggttaactcgcatctggcccgagtctcgtgtcgaataagtgacctgtacaatgat
ctgagggatggatacatgttgacaaagctgctggaggtgctttctggagaacagctgcca
aagccaacacggggaaggatgagaattcactcgctggagaatgtggacaaagctctgcag
ttcctgaaggagcaacgcgtgcacctagagaatgtgggatcccatgatattgtcgacggg
aaccaccggcttaccctgggacttatctggaccatcatcctgaggtttcagattcagatg
ataaaaatcgaaaccgatgataatcgagagacccgctctgccaaggatgcccttctactg
tggtgccagatgaaaactgctgggtaccctgaagtcaatattcagaattttaccaccagc
tggagagacggcttggccttcaacgctctgattcacaagcacagaccagatgtcatcaat
ttcagcaaactgaccaaatccaatgtgacatataacctccagcaagctttcaacactgct
gagcagcacctaggtcttaccaaacttctggatcctgaagatgtaaacatggaaaatcct
gatgagaaatccattattacatatgttgtgtcattctatcattacttctcaaaaatgaag
gcccttgctgtggaagggaaacggatcggaaaggtcttggaccaggtcattgacacagag
aagataactgataagtatgagatgcttgccagtgagctcctagaatggatcaagaacacc
atcagcgcaatcagcaatcagaagtttgccaattcactgccaggggtgcagcagcagctg
caggccttcacaacctattgcacgatggagaaacctgtgaaatttcaggagaagggaaac
ctggaagtcctactattcacaatccaaagcaaaatgcgagccaacaaccggaagctgtat
gttcccactgagggaaagactatttcggatattaataaggcttggaagcggctggagaaa
gctgagcacgagcgggaggtagctttgcgtcatgagctgatccgacaggagaaacttgaa
ctgctggctcagcgatttgatcacaaagccatcatgagggaggcttggctgaatgagaac
cagaggctcgtttctcaggacaactttggctatgatttgccagccgtggaagccgcaatg
aagaagcatgaggcgattgaggcagatatctcttcctatcaggagcggatccaggtggtg
gtggagttggctcaggaaatggagaacgagagctattatgatatcaagcgtatcaatgcg
cagaaggacaacaccttacggcagtggaaactcctgactgacctgctgactgcacggcga
gtccgcctggagcagaatgtggcccttcagaacattttccaggaaatggtctacatgatt
gactggatggaagagatgcaggcgctggttgtatccaaagagtacgggaagcatttgctg
gaagtggaagaccttctccagaaacatagcttactggaagctgacatcgctgctcagact
gaaagggtccgcagcctcaatgaggcagctctcaagttcaccgaaatagagggttacctg
ccatgtgacccacaagtgatctgtaaccgtgtacaccatgtgaagacctgcctggagggg
ctctgtgagctggccactaagagacggaacgagttagaggactcccgccaactgtggact
ttctttcaagaggtagaagaggcagaaagctggatccgagagaaagagcagatcctttct
gccaaaaaccatgggaaggacctgagtggggtcatcaggctcatgaacaaacataagata
ttgattggagagctgggtgggcggcgctctctcctacaacagaccatgaagaaaggggag
cagatcttagctaagaaacgtctcagaggtagcaacatccaggagagaaccagggaggtc
aagatgaggtggaagaagctggaggaagtttctactatccaccagcagaagctccaagag
gctttgaactttcaccagtttagctcagacacagatgacctcgtagcctatctgcaggac
acttaccgtcttgtctcaagtgatgactttgggcatgatgaatactccactcagtccctc
atgaagaagcacaagggactggctgaggagatcgagaagcatcgctctgctgtcctagcc
ttgaggatgcacctgtctgctctggctcctgagtaccgggacatggtggatgttcagata
aggatagtggaggtggagcagctatatagcgaagtggctgaggtggccgtactacgaagg
caatggctgcaggatgccctggctgtctacaggatgtttagtgaggtgaacgcctgtgag
gtgtggatagatgagaaggagcaatggttgaataaaatggagatcccagagaagttagaa
gaggtggaggtcgtacagcacaggtttgaaagtctggaccaggagatgaacagcttgatg
ggacgcatcctggatgtgaatcaggttgtgcagcaattggtggatggtggtcatcccagc
gcctctgaggtccgggcttgccaggaccacttaaacagcaggtggaaccgcattgtggaa
cttgtggagcagaagaaggagaacctgaactccatcctccggatccagaactatttgctg
gaatgcaatgagaccaagtctcagatccgtgaaaagcgaaaagccattgaatctacacag
tacaacagcagtgacatggggggtgttctatctctgcagaggaagctctccactatggaa
gctgccttggtggccattgccccaaagctgattgagctccagcaagatgcagaggctctg
gccaacactcatccagcccaagccatggaaatcctcctgcaattcgagcaaatcagtgaa
gagtgggaggccttaaagcgtaccctgcagggctgtgaggactctcttactgtggccact
cggctacagcagttcattcaggatctggacagcttcttgacctggttggtcaagacccag
acggccgtagcctcggaagagctgcccaacaacctggcagaggctgagaagcttctcaac
caacatgctgccctaaaggaggacatcaaccactatgaggaagattacaacaagatccaa
gcagttcatgacttgctagccttggaggaggccgacatcccatacctttctctacaacaa
tggcttcaaaaacttgatgtcggctggaacaagctgttacagatgtgggagagccgacga
gaggttctggtgcagtcacatatctttcatctttttttgcgagatgttaaacaagctgag
gcctgtctaaacaatcaggaatctaccttggctcacgttgaactgcccaacacggtggag
accgttgaagctgccatgaaaaagcacaagaatttcctcaccaccattgaactgaataag
cagaaaatcaacttggcgattgacgctggtgagagcctcattcgcctgggaaacttctac
tcagacaaggtgttggagcggatcaaaataataaaaaagaggagcctacggaattgcgca
cttgccattcagtggttgcagcgactgaatgaccacttggcactgcagaagttcttgcag
aactgcgacgagctggactcatggattaacgagaagatgctcactgccaaggacacgtcc
agggacgaggcgcagaaactgcacaagaaatggctgaagcaccaggcgttcatggcggag
ctgggccagaaccgggagtggctggacaagatcgaaaaggccgaatctggggacacagtg
aagaaggaaggtcaccagctcattcaagagaagccagagttagcaagtgtggtgacgcgg
aagttggaggacatccggcaatgctgggtggaactagagactaccacgcaagctaaggcc
agacagctttttgatgccaacaaagctgatcagctagtccagagctatgctgatctggat
aagaggcttctcaacctggagggtgatctgcatagtgtggatcctggccctgacatggtc
agtgtcaacaaccagctgaagaaactgcaggcaatggaatcccagatggaggagtggtac
aaggaggtgggggagttgcaggcccaaatttcatcccttccactggatacctccagcaag
gagctggtgaatgataagcagaatgttgtggggacccgcattgtgcgccttatcgagcca
ctgaaggagaggaggcgaatcctgctggcttctaaggaggtccatcaaatcagccatgat
ctggaagatgagattttctgggttcaggaaaggctccctcttgccactttgaaagaatat
gggagtaacctgcaagctgttcaacagtttataaagaaaaaccagaatctgcggcgagag
atccaagtgcacagcccacgagtggaggatgtgctagagcgggcaggagccattgcaacc
atcaagagcccagaggtggaacctgtgcgtgagaactttgaaaagctgagagagctgtgg
gttgctctgcgagagcagacagaacggcggcagcaactgctggatgcttcctaccaggtg
gagcagtactatttcgatgtagcagaggtggagtcgtggttgagcgagcaggagctgctg
atgatgaatgaccaaaagggaaaggatgagcagggcactttacagatgctgaagaagcac
ttaatgctggagcagacgattgagaattacgaagagaccattgccactctgtctcggcag
tgcaggtctctactggagctgggccatcctgacagcgagcagataagtaaacgtcagtct
cagattgaccggctctacgtgtctctgaaggacttggtggaggaacgacgggtgaagttg
gagcaacagtactggctcttccagttgaaccgtgaggtggacgagctggagcactggatc
gctgaaaaggaggtggtggctggatcaccagagcttggacaggactatgaacatgtcacg
ttacttcaggagaagttcacagagtttgccagtgaaacggggagccttggacatgagcgg
atctctgctgtgaaccacatggtggatgaacttattgactatggccattctgatgcagca
acaatcgctgagtggaaagatgggctcaacgaggcctgggcagacctgctggaactaata
gaaaccagggcccagatgctgtctgcttcccacgaactgcacacattttttaatgactgc
aaggaagtcctgtcgcagattgaagagaagaagcagcgccttcctgaggtgacctctcgg
gagtcgaagacctctgctggaactctacagagaatgttacattcgtttgagcatgatgtt
caggtattggttacccaggtacggcagctgcaagagaatgcggcccagctgcgtacggtt
tatgctggagagaatgcagaagctattgcctccaaagaacaagaagtgatgcgttcatgg
aaggaactgctaagctcctgtgaggactgcagacttcagatcactaccactacagacaaa
atccggtttctggggatggtgagggaccttatctcatggatggagagcatcatctgtcag
atcgaagcagcagagaaacccagggatgtatcttctgttgaagtgtcgatgagttatcac
caaggtttgaagaatgaaatagagtcccgcaataaaaatattgtttcttgtgtggatatg
gggaagaccttagtgctgaacaaaagcccagcagctgaagagattaaggagaaccttgaa
aaattgatggcaaagaagaaagagatgatagagaagtgggacaagcactgggagtggctt
cagcagatgctggaggtacaccagtttgcccaggaagcagttgtagctgatgcatggcta
acagcccaggagccaattataaagagcagtgagttggggaacagtgtggatgaggtggaa
cagctaattcggcggcatgaggccttccgcaaaactgctgctgcttgggaagaacgcttc
agctccctgagacgcctaaccacacttgaaaaggtaaaagcagaacaaagtaagcagcct
ccaactccacttcttgggcgaaagtttttgacggacccaggagatcttacaccagctaag
gctgctgttccagtatttcgcccatctgcttatgaaaagcctgactccaagttagaccgt
aaggatctaatcaagacattggagccacaaccttttctcaatggagttaaacatgagggt
aatgaactgaagcctgaaatagtggaacccaagattgcatatgtgcggcaagagctcaaa
ccagagcgtttgcaaccaaaaatcgaccatgtccaagacagtcttcagcccactatgggg
cacaaaacctcaaaccttaaagaaaaggtagaggcaaagtctctgacttattcagggctt
aaaactgatagggtagactcaaaacttactccacaccttgcagtgccggagggactcagt
gtgagttttgaacaaactgaggccaaaagtgggcgtggagagccacatgcggaaaggcgg
cgtgatcgccatgagcggaggcaggaaaagcaagaatccagcgatcatgacactcctcgc
caagagcaaccggagaggaagcgagatcgtcatgaaaggagactggaaaggcaagaggca
gaagagcaggagaccacaaaaccagagtcatcagaaaaaaagcgagaacggcatgagagg
aggtttgaacgacaaggttcaagtgagcaggagaccccaaaacaggaacaatcagaaagg
aagagggaacgccatgaaaggaaattggagaggcaggagtctagcgagcatgagactcca
cgcaatgatccatctgacaagaaaggagggaaagctaccttggcagatattgttgagcag
ctgcaagaaaaggaagcagctcaggtgcgtgaaaaagatgccccatctcgtatgccaaat
ggcattgacaagctcccagagagaacaacaaggcctgaccgaccacgggccagagatcgt
ccaaagccaagaagacgaccacgccccaaagatcccaaccagcctcctggagaagcccga
aggtctcgctcagcgccagctcagactaatgttcctctgctgccacccccaactcacact
gtccagcaggaaggccttctactccggaagcatgaactcgagggaccaaataagaaggcc
tccaacaggtcctgggtaaacttgttctgtgtgctcagcaagggtgatcttgggacatac
aaggactccaagagccagtcctctgggaccacctatggaggtgaagccttgattagcctg
cacaacgcagtctgtgaaatcgccaatgactacaagaagaagaagaatgtgtttaaactg
aggacaagtgatggcaacgaatttctcttccaagcaaaggatgaggaggaaatgaaaaac
tggatccgagccatcgccacttcggcctctgagcatgctgaaattgccaaatggggccag
tccctcctcactacctcttccacggatgaaagcaacctgaagcgggagtctgatcgcagg
cctagcggttcaggaaagaagaagtga
DBGET
integrated database retrieval system
