Pleurodeles waltl (Iberian ribbed newt): 138259532
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Entry
138259532 CDS
T10800
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138259532 (BRF1)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
138259532 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
138259532
NCBI-ProteinID:
XP_069063435
LinkDB
All DBs
Position
9:complement(496144335..497015191)
Genome browser
AA seq
678 aa
AA seq
DB search
MSGRRVCQNCGCADIDVDQARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
SDGSSKAPSLGGGFHTNLGKESRAQTLQNGKRQIHHLGVQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMSHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLILARELCINAP
AIDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVASRM
HEFRRTTKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFLKVDLEQECDPPSFTAGQR
KIRIQQLEQELAKKLDEVAGEITCYQDEIENELENSRPKPKGLYASYSKDADYSDENGSS
ICGEEEADEELEAAANHLNKDIYDVLLDRERFNNDQESNHRLENASPVKPPALESLLGPL
PTAASLGITESIKECIITKGRESYDTSKDGELDLNGIDDSEIDRYILNEKEAQIKAELWM
KENADYLKEQKEKEERIAKEKELGIYKEQKPKKSSKKREPIHASTAGEAIEKMLEQKKIS
SKINYDVLRDLNSKGSSTPKREDDSTDESNSKKLSRRKSSGSRNLGSPISSVSKRMRPMV
SSTPAKKAAVQQGTPNSKPAAPEPAKPSNVVVESGPVTYSHEDDIDEEEEEEDEHCVSAL
QLMGGSEYGCDIDDDEGF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcggcgagtgtgccagaattgcggatgcgctgatatagacgtggaccaggct
cgcggagatgcagtgtgcacgggttgcggctccgttttggaggacaacatcattgtgtcc
gaggtgcagttcgtggaaaacagtgggggtggctcctcagccgtgggacagttcgtttca
tcggacggttcgagtaaagcaccgtcactgggaggaggattccatacaaatttgggaaag
gagtcccgagcacagacacttcagaatggtaaacgccagattcaccacttaggagtccag
ttgcagctgaaccaacattgccttgatactgcgttcaattttttcaagatggcagtaagc
aagcacctcacccgtgggagaaagatgagccatgtcatagctgcatgtttgtacctagtt
tgtcgaacagaaggaacgcctcatatgttacttgacctcagcgaccttctgcaggtgaat
gtgtatgtgctgggaaaaactttccttatcttggccagagagctctgcattaatgctcca
gctatagatccatgtttgtatatacctcgctttgcacatatgcttgaatttggggacaaa
aatcacgaagtctcaatgactgccctacgattgctacaaaggatgaagagggactggatg
cacacgggacgtaggccttctgggctatgtggagcagctcttctagtagcatcaaggatg
catgagttcagacgcacaactaaagaagtcatcagggttgtcaaagtttgtgaatcaaca
ttacggaaaagacttacagaatttgaagacacgcctaccagtcaactgaccattgatgag
tttctgaaagtggacttggaacaggagtgtgatcctccgtcattcacagctggtcagagg
aaaatccgaattcagcagctagagcaagagttggctaaaaagcttgatgaagttgcaggt
gaaataacatgttatcaggacgaaatagagaacgaactggaaaatagtaggccaaagccg
aaggggttgtatgcatcgtatagtaaagatgcagattatagtgatgaaaacggctccagt
atttgtggggaagaggaagcagatgaagagcttgaagcagctgccaaccatcttaataag
gacatctatgatgttctcctcgacagagaaaggttcaataatgatcaggagtccaaccac
cgtttggaaaacgcgtctcctgtgaaaccccctgcgcttgaatctctccttggtcctctc
ccaactgctgccagccttgggattacagagtccattaaagagtgcattatcaccaagggc
cgagaaagctatgatacatcgaaagatggtgaactggacctaaatggaatagatgacagt
gaaatagaccggtatattctaaacgaaaaagaagcacaaataaaagctgaattgtggatg
aaagaaaatgcagattacttgaaggaacaaaaagaaaaagaagaacgtattgcaaaggag
aaggagcttggcatttacaaagaacaaaagccaaagaaatcttcgaagaagcgagaacca
atccatgcgagcacagcaggcgaggctattgaaaagatgttggaacagaagaaaatctcc
agtaaaatcaattacgatgtgctaagggaccttaatagtaaagggagcagcacaccaaag
cgggaggatgacagcacggatgagagtaactccaagaagctgtcaaggagaaagtcttct
ggaagccgaaatctcggcagccccatcagcagtgtcagcaaaagaatgaggcctatggtt
tcttccacacccgccaaaaaagctgcagtccagcagggcacaccaaactccaagccggca
gctccagaacctgcaaagccttctaatgtagttgtggagagcggccccgtaacatacagc
catgaagatgacattgatgaggaagaagaggaggaggatgagcactgtgtgagcgcactt
cagttgatggggggaagcgagtatggctgtgatatagatgacgacgagggattttga
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