Pleurodeles waltl (Iberian ribbed newt): 138259564
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Entry
138259564 CDS
T10800
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04137
Mitophagy - animal
pwl04140
Autophagy - animal
pwl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138259564 (HIF1A)
04137 Mitophagy - animal
138259564 (HIF1A)
04148 Efferocytosis
138259564 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138259564 (HIF1A)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138259564 (HIF1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
138259564
NCBI-ProteinID:
XP_069063495
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All DBs
Position
9:complement(513713282..514069190)
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AA seq
805 aa
AA seq
DB search
MSLVVTEEGQGTLGTVSSERRKEKSRDAARCRRSKESEVFYELSHQLPLPHHVSSHLDKA
SIMRLTISYLRMRKMLDAGKCEPETENELDKQLNCFYLKALEGFVLVLTDDGDMIYLSDN
VNKCMGLTQFDLTGQSVFDFTHPCDHEELRDMLTHRNGNSKKSKEQITERSFFLRMKCTL
TSRGRTVNIKSATWKVLHCTGHIRVYDTCNNHTECGYKKPPMTCLVLICEPIPHPSNIEV
PLDSKTFLSRHSLDMKFSYCDERITELMGYEPDELLGRSIYEYYHALDSDHLTKTHHDMF
TKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKELIFSLG
QTESMLKKEEVPDVEMAPVIESEKEATNLFEILKGEPDALTMLAPDAGDVIIPLDDFCTN
ESEEQQSNDAPLYNDVMLHTSNEQLQRLGIPMSPAASESSKPLLSNTDPALNSEVVVKTE
PRKETLELSFDVPQLNKQPSSPSDSNTSDSSPEQSSPSEYCFDVDSDISKEFKLELVEKL
FAVDTEAKAPFSTKETDLDLEMLAPYIPMDDDFQLHTFDQLSPLDTDPSNQPVTPVFQLP
QATATDEFKPAEIENMDNIKKILASWSPHRGQKEESHASASPYTRSPTSSPVRTAKGISE
KAESHPGTPNLLSSIILNRGNTALEGDLGPKIISLQNTPRKRKMEHDGSLFQAVGIGSLF
QTSSNPSTNLSLSWKRVKGCEPSGAEQRTIILISTDMTSRLLGHSVDGSKLPHLTSYDCE
VNAPLKDSRNLLQGEELLRALDQVN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccctagtggtgacagaagaagggcaaggaacactcggcacagtcagttccgagcgc
agaaaggagaagtctagagatgctgctaggtgcagaagaagtaaggaatcagaggttttc
tatgaactttcccatcagttaccacttccacatcacgtgagctctcatcttgacaaagct
tcaataatgcgtttaaccatcagctacctacgcatgagaaaaatgctagatgctggtaag
tgtgagcctgagactgaaaacgagctggataaacaactaaactgtttctacctgaaagcc
ctggaaggattcgtccttgttctcaccgatgatggagacatgatatacctttctgataat
gtcaacaagtgtatgggactcactcagtttgacctgactggccagagtgtctttgatttc
acccatccatgtgaccatgaagaactgagggatatgcttacgcacagaaatggcaattca
aaaaagtcgaaagagcagattacagaaagaagctttttcctgagaatgaagtgcactttg
actagcaggggacggactgtgaacatcaagtctgcaacgtggaaggttcttcattgcaca
ggacacattcgtgtctatgacacctgcaataaccatactgaatgtggctacaaaaagcct
ccgatgacctgcttggtgttgatctgtgaacctatccctcatccatcgaacatcgaagtt
ccattggacagcaaaaccttcctcagtcgccacagcctggacatgaaattttcctattgc
gatgaaagaatcaccgagctgatggggtatgagcctgatgaacttttgggtcgttcaatt
tatgaatactaccacgcactggactctgatcatctgaccaaaactcatcacgacatgttc
acaaaagggcaggtcacaaccggacagtatcggatgcttgctaaacaaggtggatatgtt
tgggttgaaacacaagccactgtgatatacaatacaaagaactctcaaccacaatgtatt
gtatgcgtaaactacgttttgagtggcatagtccagaaagagttaatcttctcccttggg
caaaccgaaagcatgctgaaaaaagaagaggtgcctgatgttgagatggcgcctgtgatt
gaatctgaaaaggaagccactaacctgtttgaaatattaaagggagaaccagatgcttta
actatgctggcaccagatgctggagatgtgattatacccttggatgatttctgcacaaat
gaatccgaggagcagcagagtaatgatgctccactgtataatgatgtaatgcttcatacg
tcaaatgaacaattacagagattggggattccaatgtctccagcagcatcagaatcgtca
aagcctctgctgagtaacacagaccctgcacttaatagtgaggtagtggtgaagaccgag
ccaagaaaggaaactttagaactttcttttgatgtccctcagttaaacaagcaaccaagc
agcccttcagattcaaacaccagcgacagttcgcctgagcaaagttctccgagtgagtat
tgctttgatgttgatagtgatatttcaaaggagttcaagttggagttagtagagaaactg
tttgccgtagacaccgaagctaaagccccattttccaccaaggaaactgacttagatttg
gagatgttggctccatacatcccaatggacgatgattttcaattgcacaccttcgatcag
ctgtcacctttggatactgatccttctaatcaaccagttactccagtatttcagctgcct
caagcaactgctactgatgaatttaaaccagctgaaatagaaaatatggataatattaag
aaaatccttgcttcgtggtcacctcacagaggtcaaaaggaagaaagccatgcttctgcc
tctccctataccagaagtccaacatcttctccagttcggactgcgaaaggaatctctgag
aaggcagagtcccaccctggaactccaaacttgctatcgtctatcattttaaatagaggg
aatacagctttggagggtgacttgggcccaaagatcatatcactgcaaaacactccacga
aagagaaagatggaacatgatgggtccttatttcaagcagttggaatcggttccttgttc
cagacctccagtaatcctagcactaacctatcattgtcttggaagcgtgtcaaaggctgt
gaacctagtggagcagagcaaagaaccatcatattaatatcaacagatatgacaagtcga
cttcttgggcattccgtggatggaagtaaactaccccatctaaccagctatgactgtgaa
gtcaacgcacccttaaaggacagccgaaatctgttacagggagaagaattgctcagagcc
cttgatcaagttaactga
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integrated database retrieval system
