Pleurodeles waltl (Iberian ribbed newt): 138259576
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Entry
138259576 CDS
T10800
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
pwl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138259576 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
138259576 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138259576 (MNAT1)
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138259576 (MNAT1)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138259576 (MNAT1)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138259576 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
DUF3292
zf-UDP
zf-RING_2
DZR_2
HMBD
Motif
Other DBs
NCBI-GeneID:
138259576
NCBI-ProteinID:
XP_069063511
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All DBs
Position
9:complement(517791371..518177596)
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVELLFVRGAGNCQECGTALRKNNFRV
QLFEDPTIDKEVEIRKKVLKIYNKREEDFRGLNEYNDYLEEIEDIVFNLTNNVDLENTKK
KMEMYQKENKEVIHKNKIKLTREQEVLEEALEEERNANVQRRVLIQKEEKMQQMLKKKNK
QALLDELESSHLPAALLLAQHKDRSTQLEIKLEKPRTIKPVTFSTGIKMGQHVSLAPIRK
LEGALYEYTPIQIETYGPDVPQLELLGRLGYLNHVRAASPQDLAGGYMSSLACQRALQDA
FSGLFWQPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccagggatgcccgcggtgcaagaccaccaagtacaggaacccttccctgaag
ctgatggtgaacgtctgcgggcacacgctatgtgagagctgtgtggagctgctgttcgtc
agaggggctggaaactgtcaggagtgcggaacagctctacgaaaaaacaactttagagtt
cagctcttcgaggaccccacgatagacaaagaagttgagattcgaaagaaggtgctaaaa
atatataataaacgagaggaagactttcgaggactaaatgaatataatgattatctggag
gaaatagaagatattgtctttaacttgaccaacaatgtggatcttgaaaatacaaaaaag
aaaatggaaatgtaccaaaaggagaacaaagaagtcatccataaaaataagataaagttg
acgcgagaacaagaagtgttggaagaagccttggaagaggaacgaaatgctaatgtgcaa
agaagagtactgatccaaaaagaggaaaagatgcaacaaatgctgaaaaagaagaataaa
caagctcttctcgatgagctggagagttctcatctgcctgctgcgctgctcttagctcag
cacaaagacagatccacgcagttggaaataaagctggagaagcccagaacaatcaaacca
gtaacgttttctaccggcatcaaaatgggtcagcatgtttccttagcgccaattaggaag
cttgagggggcactctacgagtatacaccgattcagatagagacgtatgggccagacgtt
ccacagctagaactgctaggaaggctggggtatctgaaccatgtaagagcagcctcgcca
caggatctggctggtggctatatgtcttctctcgcatgccaaagagctctacaggatgct
ttcagtgggcttttctggcaaccaagctaa
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