Pleurodeles waltl (Iberian ribbed newt): 138259946
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Entry
138259946 CDS
T10800
Symbol
RIN1
Name
(RefSeq) ras and Rab interactor 1 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138259946 (RIN1)
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138259946 (RIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_2
Motif
Other DBs
NCBI-GeneID:
138259946
NCBI-ProteinID:
XP_069064042
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Position
9:complement(770919852..771031281)
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AA seq
872 aa
AA seq
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MDQQEQTDPISKGGLATPSPSPFSAMKDPVYDYPNTSFPCRTVQRGSLKHVRVLDRLLLT
QHVWLQLTVNSATALHILQREPPGTFLVRKSNTNQRKVLCVRLSGVCGPSFVHHVYIQEE
HSEWSLDGSELTFPDLFRLISSYCSARDILPQVLRLPEAIMKATSHKQLEAISHLGVEFW
NSSLNTQELQSNQEKSVRPDVPVLDLSNCSTPELLDNNPVCLLKTRSPFELDCLAANGAL
RFFNPLFLEDGVSESRLKRGRFKKSITVRVSTENSSPLSPPPNPPPPIPAEALHRQRPGT
VPVMKQPSVDEEYKQPKMSLRSRLRKKLSKGSLDIGLKGVSMLAPTQEEEDYQVPRSGQT
EQVQMLAHTERLNVNNDVKSTDSESMNPSRISEIEPLDFDSKRLPSLTELDSSSLSSLDE
VDMDGHHKHSSPQLQRKSTTSIRRSKTPFRAVSEVFLSFLPPERKVVRVVEELAQDRRTA
FGNMVQDFLTLLRSRQKVPEPCKATLQAVRLFMSQMKNCLLDGSELNLSLQTMLPEEDQD
GVMEKAMYRCILKPLKRYLDCRLRRAFTEDGSLLQIRENFALVRQRGAQAFDVRSGLPSP
QEVDKIRHKLVKMQKAYSPTDKVIILLQACKLMYNCMAAHSDNVYGADDFLPVLSYVLAL
CDLPELLMEVEYMMELLDPALLMGEGGYYLTSLYASLTMLSSYHEPKPEKTEFSVEFKKS
LTHWHRRRVGLPSFNDFQNFLRIGYQDSTNGCSSKTLVVHPSDTVETVCQLCAQKFKLAS
KEGYGIFLYMDGEYQLLADDVHPQEIKAKLQSQGANFYFVYRRVEEVEDEKREKLEGNHE
GENCFSGEDKEEEKSTAWQLQRHHSIDVEDGS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaagaacagacggaccccatatccaagggtggtctggcaacgccatcgcca
tcccctttcagtgcgatgaaagatccagtctatgactatcccaacacctccttcccctgc
agaactgtccagcggggatctctgaagcatgtccgggtgctcgaccgcctcctgctcacc
cagcatgtctggcttcaactcactgtgaactctgccacagcccttcacatcctgcagaga
gaacccccagggacgttcctagtgcgcaaatcaaacaccaaccagcgcaaagtcctgtgt
gtgcgactgtcaggcgtatgtggcccatcctttgtccaccatgtctacatccaagaggag
cactctgagtggtccctggacggctccgagctcacgttcccagatctgttccggctcatc
tcctcctactgcagtgccagggacatcctcccacaggtgctgaggttgccggaggccatt
atgaaggccacatctcacaagcagctggaggcgatctctcatctcggggttgagttctgg
aattcatcgctcaacacacaggaattgcagtctaatcaagagaagtctgtacgaccagat
gttccagtccttgacctctccaactgctccacccctgagttgctggataataatcctgtc
tgcctcctgaagactcgtagcccttttgagcttgactgcctggcagcaaatggggcactt
cgtttcttcaacccactgtttctggaagacggtgtgagtgagagccgcctcaagcgtgga
cgcttcaaaaagagcataaccgtgcgagtgtcaacagaaaattccagcccactctcacct
cctcccaaccctccacccccgatcccagcagaggccctacacaggcaaaggcctggcacg
gtcccagtgatgaagcagcccagtgtggatgaggagtataagcagcccaagatgtcacta
cgatcacgtctacggaagaaactcagcaaaggaagcttggatattggactcaagggagta
tctatgcttgcccccacacaggaagaggaggactaccaggtgcccaggtctggacaaact
gaacaggtccagatgttagcccacactgaaagactcaatgtgaacaatgatgttaaatct
acggattctgaatccatgaatccttctcgaatctcagagatagaaccattggactttgat
agcaagcggctcccatccctcacagagctggacagcagctccctcagcagtcttgatgag
gtagatatggatgggcaccacaaacactcctcacctcagctgcagcgcaagagcacaaca
tcgattcggcggtccaagacacccttccgggctgtcagcgaggtcttcctctcattcctg
ccacctgagaggaaggttgtgagggtagtggaggaacttgcccaggacaggagaacagca
tttggcaatatggtgcaggatttcttgacactgttgaggagtaggcagaaggtgccagag
ccctgtaaggcaacacttcaggcggtacgactgtttatgtcacagatgaagaactgcctt
ctagatggttcagaactaaatttgtctctccagaccatgctccctgaagaagaccaagat
ggggtcatggagaaggctatgtatcgctgtatcctaaagcctctgaagaggtacctggac
tgtcgtctcagaagggccttcactgaggatggctctcttctgcaaatacgggagaacttt
gccctggttcgacagagaggggcacaggcctttgatgttagatcaggcctgccaagcccc
caagaagtagacaagattcggcacaagctggtaaagatgcagaaagcttactcgccgact
gacaaggtgatcattctgctgcaggcctgcaagctgatgtacaactgcatggcagcccac
tcagataacgtatatggggcagatgacttcttgcctgtactgtcctatgttctagcgctg
tgtgacctgccggagctcctgatggaagttgagtacatgatggagctcctggaccctgcc
ctgctcatgggagaaggtggttactacctgaccagcctgtatgcaagcttgaccatgctg
agcagctatcacgagccgaaacctgaaaagactgaattctctgtggagttcaagaagtcc
ctcacgcactggcacaggcggcgggttggccttccctccttcaatgacttccagaacttt
cttcgaatcggctaccaggactccaccaatggctgctcatccaagacgctggtagtgcac
ccttcagacacagtagagacagtctgccagctatgtgcccaaaaatttaagctggcgagc
aaggagggttatggcatcttcctgtatatggatggggagtaccagctcctggcagatgac
gttcacccccaggagatcaaggccaagctgcagagccaaggggccaacttttattttgtc
tacaggcgtgtggaagaggtagaggatgagaaaagggaaaaacttgaaggtaaccatgaa
ggggagaattgctttagtggggaagataaagaagaagagaagagcactgcctggcagcta
cagaggcaccattcaattgatgtagaggatggctcatga
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