Pleurodeles waltl (Iberian ribbed newt): 138260112
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Entry
138260112 CDS
T10800
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04136
Autophagy - other
pwl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138260112 (ATG2B)
04136 Autophagy - other
138260112 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138260112 (ATG2B)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138260112 (ATG2B)
Membrane trafficking [BR:
pwl04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
138260112 (ATG2B)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138260112 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
138260112
NCBI-ProteinID:
XP_069064369
LinkDB
All DBs
Position
9:complement(912728636..913589401)
Genome browser
AA seq
2075 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLTLDLYQGTGSLSQVPLDKWCLNEML
ESADAPLEVTGGFIQTISLSVPWGSLLQDNCALEIKGLEVVFRPRPRPASGSEPMYWSSF
MASSMQLAKECLSQKLTDEQGESSQPFEGLEKFAETIETVLRSVTVTFIDTVLRIEHVPE
NSKTGTALEIRISRTVYRDEAAGECSGINVHQPTAFAHKVLEVSGVSLFWDEFPVKPSPV
CSTAHVETEPKLSPSWNPKIMYEPHPQFTRTIPEVAPSDPVQIGCMIGKMELRLTLKQNE
VLPGTKFDIDGHIDSFHLFLSPRQVHLLLETLAAIAGPETSNRVLASKDRRNRPMQQEDE
YRIQNELKRYLRKDSLTGEASPEKSFYETENTRTASSHDEEVFFSMADMDMSHSLSSLPP
LGDPPTVDLDLSLTSTYTNTPTGSPLGATLAQPSWGDFLDHHKREDHTVTGLKCAPSRLH
HAQLRRTSLPSRSISLDESRPELVFRLGVGTLSLSVLHIDPLSPPESSLNLNPLTPMALD
YFSQIAKVDPIKLSSDDFLSFRTVLAEACAHDHLRFMGAEIKLSHEQRQKSSSRCFSTDL
AIGQMELLECLFPTESHSIPAQYTELLKFANRKGSDSNVASCIHLHYKYTDTKGPQGSQG
RLSALPQKSELHINLSPVYCELDISIVDRLNSLLQAEKLTTVEMMTSHLYTSYSKHISLH
KAFTEIFLDDSRAPTNCCVSVNVTAPELNLAVRFPIPDLRSDQERGPWFKKSLQKEILHL
QFMDPEFKTEFVGGSSPEQVKLELTFKELTGTFQEGKEEPLINFFKVASGIDGDMTSSDT
FDWPRIVLKINPIAIHSILERIAGDDEDDCDGRFPEEDGGSHSLKDVCDLKRPEPSPFSS
RRVMFENEEMVMPGDALEMLEFQEKTIGSSHYVLELMLPTIYLTLPSKGFYEKLYNRISN
DLLLWEPTAPSPVETFENLSYGIGLSVASQLINTFSKDSSNQFKSANHYDEESGSEEESL
QFGSTLDPNYRSRRKKKMEAQNKHAQSFLSVLLHVNHGFLSFCTDVKLDDGSVLDGKHGE
FWLEFNNGSLFSVAKYDGFVDKHYICLHATSLSLYHQGMVDGVVLLNDVRLPTMTRPLWL
EPTIYSSEEAGVSNRIPSNGVAVETLSMLSAAVKIQSDKAENNTKEFLVAVGLRGATLQH
RVLPSDLSWHEQILSFLNISDEPVLGYNPPTSLTTFHIHLWSCALDYRPLHLPTRALLTV
ETFSISRSVAFDKLSSTLRIILDEAALYLSDKCNAVAVNLNRDYVRLMDMGLLELTITAV
KPGADGERTKPRFELHCSSDVIHIRTCSDSCAALMNLIQYIANYGDLHPPTRTELTPEVP
KQGSKPGANPKSSSQGAVLAEAEQQILRDLMSDAMEEMDGHQAASPVNHLLNGVSDEKCH
VQEPSCSDLFLFPDESGNISQELFPPCVAFTPHLIGEAMMDVPSESDDFCILYAPKTVIS
DKEEEPVVKKMVADAVIIKDNHFSLRGRKTDSSKAPLHFPVPEMRYVVKEVSLVWHLYGG
KDFGSSHHGSPAKSYSTPQSSPNHTPTRHGRYTVRGGRGRNQDFLMEIQLTKVKFQHEVY
PEFELESELSPMEQPVSRQVFVVQDLEIRDRLASSQMNKFLHLYCSKEMPRKAHSNMLSI
KALHVRPESVRSPQECCLRVSLMPLRLNIDQDALFFLKDFFSSLSSEVEVLMTPDPEVKK
LPGADVTCSMPKHISGLKDVRPVISFSGQTQPYQNGTSHSISTLHGDSNDLDQGGALFND
QPIFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNSSELKLKRLCYRHGLLG
VDKLFAYAIHEWLSDIKKSQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVR
GFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGLSPIEATRTKRFSHHRLA
HQPVDLREGVAKAYTVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPAVVKPF
IVATEATSNVLGGMRNQIRPDVRQEESQKWRQGED
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccattctcggaatccatcaagaagcgggcatgcaggtacttgctacagaga
tatttgggtcacttcctgcaggagaagcttagcctggagcagctcactttggacctgtac
cagggcactggctccttgtcacaggtgccacttgataaatggtgtcttaatgaaatgctg
gagtctgcagatgcaccactggaagtcacaggaggatttattcaaacaatttctttgtca
gtaccatggggttcattgctgcaggataactgtgccttggaaatcaagggattagaggtg
gtcttcaggccaagaccacgaccagcctccggttctgaacctatgtattggtcaagtttt
atggctagcagtatgcagcttgcaaaggaatgtttgagccagaaactcacagatgagcaa
ggagaatcatctcaacccttcgagggacttgaaaaatttgcagaaactatagaaacagtt
cttagaagtgtcacagtcacatttatagacacggttctgagaatagaacatgttcctgaa
aactctaaaacggggacggctctggaaatacgaattagcagaaccgtttaccgtgatgag
gccgctggtgaatgctctgggattaatgtacaccagcctacagcatttgctcacaaggtg
ctggaagtctctggagtttctctcttctgggatgaatttcctgtgaaaccctctccggtg
tgctcgactgcacatgtggagaccgaaccaaaactttctcccagctggaaccccaaaatc
atgtatgaacctcacccgcaatttacaagaacaattccggaggttgcaccttctgaccct
gtgcagattggttgcatgattggaaaaatggagcttcgcctgacgctcaagcaaaatgaa
gtacttcctggtactaagtttgatatagatgggcatatagattctttccatctattcctc
tcaccaaggcaggtacaccttctgctggagacgttggcagccattgctggaccagagacc
tctaatagggtgttggcaagtaaagacagaagaaatcggcccatgcagcaagaggatgag
taccgcattcagaatgagctcaaacgttatttacgaaaagattctttgactggagaagca
tctcctgaaaagagcttttatgagactgaaaacactcgtactgcctctagccatgatgaa
gaggttttcttctcgatggcagacatggatatgtctcatagcctttcctcactcccgcca
cttggagaccctccaactgtggatctagacctttctttaactagcacctacaccaacaca
ccaacaggatcacctttgggtgctaccctggctcaaccatcgtggggagatttcttggat
catcataaacgagaagatcacacagtgacaggattaaaatgtgcaccctcccgattacac
catgcacaattacgaagaacatctcttccgtcacgatcaatctctttggatgaatctaga
ccagaacttgtttttagactaggagttggcactttgtcattatcagtgcttcacattgat
cctctttcaccacctgaatcctccttgaacctaaacccactaacaccaatggctttggac
tacttcagccaaatagcaaaggttgatcctattaagttgtcatcagatgatttcctgtct
ttccgaacagtgttggcagaagcttgtgctcatgaccacctcaggtttatgggtgctgaa
atcaaattatctcatgaacaaagacaaaagtcgagctctcggtgcttcagtacagatcta
gctattggacaaatggaactattggaatgcttgtttcccactgaatcacattccattcct
gctcagtacacagagcttttaaaatttgctaacagaaaaggaagtgattcaaatgttgcc
tcctgtattcatctacattataaatatacagataccaaaggacctcagggaagccaaggg
agattgagtgctcttcctcagaaatcagaactgcacattaatttaagtcctgtatattgc
gaattggatataagtattgtggacaggcttaattcattacttcaagcagagaaactaacc
actgtggagatgatgacatctcacctctacacttcctacagcaagcatattagtttgcac
aaggcttttacagaaatttttctcgatgattcacgtgcaccaaccaactgttgcgtgtct
gttaatgttactgccccggaattaaatcttgcggttcgatttccaatacctgatctgcgc
tctgaccaagaacgagggccatggtttaagaaatcactgcaaaaagagatcctgcatctt
cagtttatggacccagaatttaaaactgaattcgttggtggttcctctccagaacaagta
aaattagagctcacatttaaggagctaacaggcacgtttcaagaaggcaaggaagaacct
ttaatcaacttttttaaagtagcaagtggcatagatggtgacatgacatcctctgacacc
ttcgactggccaagaattgttctgaaaataaatccaattgcaattcactcgattctggag
aggatagcgggtgatgatgaagatgactgtgatggacgttttccagaggaggatggtggt
tctcattctctaaaagatgtctgtgatcttaagcgtcctgaaccatctccattttcatct
cgtagggttatgtttgaaaatgaagagatggtgatgccaggggatgcattggaaatgtta
gagtttcaggaaaaaaccataggcagttcacactatgtgttggaattgatgctaccaacc
atttacctaactctgccaagcaaaggtttttacgagaagctttacaacaggatcagcaat
gatttattgctgtgggaacctacagctccttccccagtggagacatttgaaaatctatcc
tatggtattggactttccgtggctagccagctgataaacaccttcagcaaagacagctca
aatcagtttaaatcagcaaatcactatgatgaggagagtggatctgaagaagaatcattg
cagtttggttccacacttgatccaaactatcgatcccgtagaaagaagaaaatggaggca
cagaacaagcatgcccaaagttttctttcagttcttctccatgtaaatcatggctttttg
tctttttgcacagatgtgaagctggatgatggcagtgtattggatggcaagcatggcgaa
ttctggttggaatttaacaatgggtcattattcagcgttgccaaatatgatgggtttgta
gacaagcattacatttgtcttcatgctaccagcctcagtttgtaccatcaaggtatggtg
gatggggttgttcttctgaacgatgttcggctgcccacaatgacacgtccactttggtta
gaaccaacaatttattcctctgaagaagctggtgtcagtaaccgaattccatccaacggg
gttgcagttgaaacattaagcatgctgtctgctgcagtgaaaattcagtcagacaaagct
gaaaacaatacaaaggaatttctcgttgctgtgggactcagaggagcaactctacaacac
agagtattgccatccgatctaagctggcatgaacagattttgtcctttttaaacatttct
gatgagcctgttttgggttacaatcccccaacctcccttactaccttccacatccacctt
tggagttgtgctcttgactaccggcccctgcatttgccaaccagggctcttctgactgtg
gaaacattcagtatctcaagaagtgttgcctttgataagctgtcatcaactctccggatt
atcttggatgaggcagccctctatttatcagacaaatgtaatgctgtcgcagtgaacctg
aatcgtgattatgtccgactcatggatatgggacttttggaactgacaattactgcagtg
aaaccaggtgcagatggagaaaggacaaagccacgatttgagctccactgttcgagtgat
gtgattcatatccgaacttgctccgattcttgtgcagcactcatgaacctaattcagtat
attgccaattacggtgatttgcatccgcccaccagaacggagcttacgcctgaagtacct
aagcagggaagcaagcctggggcaaatcctaaatcctcttctcaaggcgctgttcttgca
gaagcagagcaacagattttgcgggatctaatgagtgatgctatggaggagatggatggc
catcaagctgcttctcctgtaaatcatcttcttaatggtgtttcagatgaaaaatgtcat
gttcaggaaccatcatgctcggatctcttcctgtttccggatgaaagtggaaatatttca
caggagctctttccaccctgtgtcgcctttactccccatttaataggcgaagccatgatg
gatgtgccttctgaaagtgacgacttctgcattctctatgcccccaagacggtcatttct
gataaagaagaagaaccagtggtaaaaaaaatggtagctgatgcagtcataataaaagac
aaccattttagtctacggggaagaaagactgattcaagcaaggcccccttgcacttccct
gtgcctgaaatgcgctatgtcgtaaaggaagtgtcacttgtttggcatctgtatggcgga
aaagattttggaagttctcatcatggctccccagctaaaagttatagtactccccaaagc
tcacctaatcatacaccaacaagacatgggcgttacacagtacgtggtggaagagggcga
aaccaagactttttaatggaaattcaactgaccaaggttaaattccagcatgaagtgtac
ccagagttcgaattggaatctgaattgagcccgatggagcaaccagtatcgcgacaggtt
tttgttgttcaggatcttgaaattcgagatagactggcttcatcgcagatgaataaattt
ctccacctttactgtagcaaggaaatgcctaggaaagcacattctaatatgctctcaatt
aaagccttacatgtgcgcccagagtctgtcagatcgcctcaagagtgctgtttacgagtg
tctcttatgcctcttcggctcaatattgaccaggatgccttattcttcctgaaggacttt
ttcagtagcctttcttccgaggtggaagttctcatgactccagacccagaagtaaaaaag
ttgccaggcgctgacgtaacctgcagtatgcctaaacacatcagtggcctgaaggatgtc
cgcccagtcatctctttttcaggacaaactcagccataccagaatggcacatcacattct
atcagtacactgcatggagacagcaatgatcttgaccaaggaggggctttatttaatgat
caacctattttctttagggagtttcgattcacttcagaagttccaatacgacttgactat
catggcaagcatgtatcaatggatcagggtaccctagctggaattctcattgggcttgct
caactgaactcttctgaactcaagctaaagagactgtgttatcgtcatggattacttggt
gtggataaactgtttgcctatgctatccatgaatggcttagcgacatcaagaaaagccag
ctgccaggaattctgggaggagttggaccgatgcactcactcgtacagttagttcaaggt
ctcaaggacttggtgtggttaccgatagagcaatatcggaaggatggtcgcattgtaaga
ggattccagagaggtgcagcttcgtttggtacttctactgcaatggcagccttggaactc
acaaacagaatggttcagacaattcaggcagctgcagaaacagcttatgatatggtgtct
ccaggtctgagtcctattgaggcaaccagaacaaaaaggttttctcatcatcgattggct
catcagccagtagatctacgggagggtgtggctaaagcatacactgttgtgaaagagggg
attactgacacagcacagaccatctatgaaactgctgcacgggagcatgagaaccgaggt
gtcactggtgcagttggaggagtccttcgtcaaattccacctgctgtggtaaagccattc
attgttgctacagaagccacctcaaatgttttaggtgggatgagaaatcagatcagacca
gatgtccgccaggaagaatcacaaaaatggcgccaaggggaggattga
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integrated database retrieval system
