Pleurodeles waltl (Iberian ribbed newt): 138260163
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Entry
138260163 CDS
T10800
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040
Spliceosome
pwl04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138260163 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138260163 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pwl03041
]
138260163 (SNW1)
Spliceosome [BR:
pwl03041
]
Complex B
Other components
Prp19-related factors
138260163 (SNW1)
Complex C
138260163 (SNW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
Motif
Other DBs
NCBI-GeneID:
138260163
NCBI-ProteinID:
XP_069064500
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Position
9:972138936..972200071
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AA seq
535 aa
AA seq
DB search
MALASFLPAPTQLSQDQLEAEERVRAQRSRQTALVSSRKEPPPYGYRKGWTPRTLEDFGD
GGAFPDIHVAQYPLEMGKKKKTSNALAVQVDAEGKIKYDSIARQGQSKDKVIYSKYTDLI
PKEVMDEDDPDLARPDEEAVRELTEKTRLALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKKEEKLRELAQIARERRAGIKTHVEKDDGEAREREEIRQDRR
KDRQHDRNLSRAAPDKRSKLQRNEDRDISEIIALGQPNTRPTTEVQYDQRLFNQNKGMDS
GFAGGEDEVYNVYDQPWRGGKEVAQNIYRPSKNADKDLYGDDLDTLMKTSRFVPDKEFSG
SDRRQRREGPVQFEEDPFGLDKFLEEAKQHGASKRPSDSSRSKEHDHEGKKRRKE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccagttttttgcctgcacctactcaactgtctcaggaccagctagaagcc
gaagaaagggtgagagctcagagatcaaggcagactgcacttgtatcttctcgaaaggaa
cctccaccttatggatatagaaagggctggacaccccgaacattggaggattttggagat
gggggcgctttcccagacatccatgtggcacagtacccactggaaatgggcaagaagaag
aaaacatccaatgcccttgcagttcaggtggatgcagaagggaaaatcaaatatgattcg
atcgctcggcaagggcagtcaaaagacaaggttatttacagtaagtacacagacctgatt
ccaaaggaggtcatggacgaagatgaccctgaccttgctcggcctgatgaagaagctgtg
agggagttaactgaaaagacgcgtctggcgctggagaaatctgtctcccagaaggtagcc
gctgccatgcctgtgcgggcagcagataagctggcaccggcccagtacatcaggtacaca
ccatcccagcagggtgttgctttcaactctggagcgaagcaaagggttattcggatggtg
gagatgcagaaagatcctatggagccccctcgattcaagattaacaagaagattcctcgt
ggacctccatcaccaccggcaccggttatgcactcccctagcagaaagatgacggtgaaa
gaacagcaagagtggaaaattcccccctgcatttcaaattggaaaaacgcaaaggggtac
actatcccgttggacaagcgcttggctgcagacggcagagggcttcagaccgtgcacatc
aatgaaaactttgccaaacttgctgaagcgttgtacattgctgacaggaaggctcgtgag
gctgtggagatgcgtgctcaggtggagcggaagatggcccagaaagagaaagagaagaaa
gaggagaagttgcgagagttggctcagatcgccagggaaagacgggcaggcattaaaacc
catgtagagaaagatgatggtgaagctcgtgaacgggaggaaatccgccaagaccgacgg
aaagatagacaacatgaccggaatctctcaagggctgcccctgacaagagatctaaattg
cagcgaaatgaagatcgagatattagtgaaataattgcattgggacagccgaacactcgt
cccactacagaggtccaatatgaccagcggctctttaaccaaaacaagggtatggacagt
ggatttgctggcggagaagacgaggtatacaatgtgtatgaccagccttggcgaggaggc
aaggaagtggcacaaaatatctacaggccaagcaaaaacgcagataaagacctgtatgga
gacgacctggacacacttatgaaaaccagcaggtttgttcctgacaaagagttttcaggc
tcagatcgccgacagcgacgtgaaggccctgtacagtttgaggaagatccttttggtctt
gataagttcttggaagaagccaaacagcacggtgcttcaaagaggccttctgatagtagc
cggtcaaaagagcatgaccatgaagggaagaagaggcggaaagagtaa
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