Pleurodeles waltl (Iberian ribbed newt): 138260284
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Entry
138260284 CDS
T10800
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03013
Nucleocytoplasmic transport
pwl03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138260284 (PNN)
Spliceosome [BR:
pwl03041
]
Complex C
Other components
EJC/TREX
138260284 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138260284
NCBI-ProteinID:
XP_069064715
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Position
9:1012018409..1012104735
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AA seq
744 aa
AA seq
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MAVAVRALQEQLEKAKESLKNVDENIRKLTGRDPNDLRPAQARRLTISGPVVAGGVGGGR
GRGGVLLRRGLSDGGGGPPAKLRDFEGAANRQGGERRTRRESRQESDAEEEEDVKKPALQ
SSIVATSKERTRRDLIQDQTIDEKGKQRNRRIFGLLMGTLQKFKQESTVASERQRKRKEI
EQKLEVQAEQEKKQVENERRELFEERRAKQTELRLLEQKVELAHLQEEWNEHNSKIIKYI
RTKTKPHLFYKPGRMYPATQKLLDESQRRMKALLEKRRLEFADQLNKMEARPRRQSLKEK
EQPAAQREEPNEEQNKENKEREEGKVVQLEEETDVLEVMEVTGNQSNDLEREEAREEENE
VCPTHSDVEKEQEEEVVHEEEEDLRLEASARVDVDEVDMRECEQQEDSYQESTLMYEESM
LVYEESEEARDENNEYSAVEQNMTENNHDDDFETAAEGRQEIDYSMVDYETQPENESVAE
MERENDYPEMETESPEKQERELEPEFRPEVELQPELEPEQEAEPEQEAEPEQEAEPEPEP
FSHSIGTIHEAVDEEAALSAFKLAEMQVQDIPLPPLPHKSKARSRSRGRTKNKISKSRGG
RSSSSSSTSSSESSSSESSSSTGSSSSRSSSSSTSTSSGSSSRGSSSSTSSSSESRSRSR
GRGGHVRDRKRRRSADRKRRDATGLDRSHKSSKVSSRDLKGSKDKSSRSDRTTRKRSMSE
SSRAGKRPSRSERDRKSDRKDKRR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggtgcgagctttgcaggagcagctggaaaaggctaaggaaagtctcaaa
aacgtggatgagaacatccgaaagctcaccgggcgggatcctaatgatctgaggcctgct
caagctaggcgtcttaccatctcaggccctgttgttgcaggtggtgttggtggaggtaga
gggcgtggtggtgtattgttgaggcgtggactctcagatggtggaggaggacccccggcc
aaacttagagactttgaaggtgcagccaacaggcaggggggagagcgtcggacaaggaga
gagtcacgccaggaaagcgacgcagaggaggaagaagatgttaaaaagcctgcgttgcaa
tcctctattgttgctacctccaaagaacgcacccgccgagaccttattcaagatcagact
atcgatgagaaaggaaagcaaaggaatcggcggatttttggcctgttgatggggacgctt
caaaaatttaagcaagagtctacagttgcatctgaaaggcaacgaaaacgaaaggaaata
gagcaaaagcttgaagtacaggcagaacaagagaaaaagcaggtagaaaatgaaagacga
gaactgtttgaggagaggcgtgctaaacagacagaactgcgtctcttggaacaaaaggtc
gaacttgcacatttgcaagaagaatggaatgaacacaactctaaaataattaaatatata
aggaccaagacaaaacctcatctattttataaaccgggcagaatgtatccagctactcaa
aagctacttgatgaatcgcagagaagaatgaaagcattacttgagaaacgacgcttggag
tttgcagaccagcttaacaaaatggaggccaggcctaggcgccagtctctgaaggaaaag
gaacaaccagcggcacagcgggaagaaccgaatgaagagcagaacaaagagaacaaggag
cgcgaagagggtaaggtggttcaactcgaggaagagacggatgttctagaggtgatggag
gtgacaggtaaccagagcaatgatctagaaagggaggaagcaagagaggaagaaaatgaa
gtgtgtccaactcatagtgatgtagaaaaggagcaagaggaggaggtagtacatgaggag
gaggaagatctaaggttggaagctagtgctagagtagatgttgatgaagtggacatgagg
gaatgtgaacagcaggaagacagttaccaggaaagtacacttatgtatgaggaaagtatg
ttagtgtatgaggaaagtgaggaagcaagggatgaaaacaatgaatattcagctgttgag
caaaacatgactgaaaataaccatgatgatgattttgaaacagcagcagaaggtaggcaa
gaaatagactatagtatggtagactatgaaactcagccagagaatgaatctgttgctgaa
atggagagagagaatgattatcctgaaatggaaactgaatctccagagaagcaggagagg
gagcttgagccagagttcaggcctgaagtagagctgcaaccagagcttgagccagagcag
gaagccgagccagagcaggaagccgagccagagcaggaggccgagccggagccagagcca
ttttctcattcgattggtacaatacacgaagcagtggatgaagaagctgctttatcagct
tttaaactggctgagatgcaggtgcaggatattccattacctcctttaccacataaaagt
aaagctagaagccgaagtaggggtcgaactaaaaacaaaatcagtaagagtagaggaggc
cgtagtagtagcagcagcagtactagcagcagtgagagcagtagtagtgagagcagttct
agcactggtagtagttccagtcggagcagttctagcagcactagcacaagtagtggcagc
agtagccggggcagcagcagtagcaccagtagcagtagtgagagtagaagccgcagcaga
gggagaggtgggcatgttagggacaggaagcgcagaaggagcgcagataggaagcgaagg
gatgctacggggttagacagaagtcacaagtcttccaaagttagtagccgagatttaaaa
ggatcaaaggacaaaagttcaaggtcggacaggactaccaggaagaggtctatgtcagaa
agtagtcgagcaggcaagagaccatccagaagtgaaagagatcgcaagtcagacaggaaa
gacaaaagacgttga
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