Pleurodeles waltl (Iberian ribbed newt): 138260330
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Entry
138260330 CDS
T10800
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Spliceosome [BR:
pwl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
138260330 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
TPR_MalT
TPR_12
ARM_TT21
ARM_TT21_5th
DUF6420
TPR_11
TPR_10
TPR_15
PPTA
GAS
Motif
Other DBs
NCBI-GeneID:
138260330
NCBI-ProteinID:
XP_069064821
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All DBs
Position
9:1079688726..1080093347
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AA seq
676 aa
AA seq
DB search
MLSPSAPQDTAIAGKPSTDMTDLDRQYADFTAEIMEVIEMEQSPENSECNKDDPGEEAGE
EPGDESACEIPTPPQPPPEELLPFPTEFATYWKVVEENSQDFSGWTYLLQYVEQENHIVA
ARSAFDHFFSHYPYCYGYWKKYADLERRHNNVTQADEVYRRGLQAIPLSVDLWIHYVNFL
TETLEPGGFETNSTIRATFEHAVLAAGTDFRSDRLWEMYINWESEQGNLKEVTVLYERIL
NIPTQLYSHHFTRFRDHIQNNLPREYLLSERFIQLRRELASMNGHGGEESLPADSTPIGL
EELTDPAQLTTEIENMRHRIIELNQEVFNHNEYEVSKRWNFEEGIKRPYFHVKPLEKAQL
NNWREYLEFEIENGSHERVVVLFERCVICCALYEEFWIKYAKYMENHGAEGVRHVYSRAC
IIHLPKKPLVHLLWAAFEEQQENIDEARRILKSFEESVGSLAMVRLRRVSLERRLGDLEE
AERLLQEAMANAKSSSESSFYAIKLARHLLKVHHDLPKARKVLDEAIERDKDNARLYLNM
LEIEYSGDLKENENNIIACFDRVVYGSLAIEMRITFSQRKVEFLEDFGSDVDRLLTAYDE
HQKLLQEHEALKRKVENGSEEPDEKKALLDDTTMLSTQMMSGDLQTSQTAYNYNAWYQYN
YQNSWNYSQYYTSPST
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtcccagcgccccccaagacactgcaatcgctggcaagccaagcacagacatg
acagatctagatagacaatatgcagatttcactgcagagattatggaagtcatagaaatg
gaacaatctcctgagaactccgagtgcaataaagacgatcctggtgaagaggccggtgaa
gagcctggagacgaaagtgcttgtgaaattcctacacctccccaacctcctccagaagaa
cttcttccttttcctactgaatttgcaacatattggaaggttgtggaggagaacagtcaa
gatttttcaggatggacatacttgcttcaatatgtggagcaggagaatcacattgtggct
gcccggagtgcatttgaccactttttttcacactatccgtattgttatggctattggaaa
aagtatgctgacctggaaagacggcacaataacgttacacaagctgatgaggtttatcgg
cggggcctacaggcaatccccctgagcgttgatttgtggatccactatgttaacttctta
actgagacacttgaaccaggtggttttgaaacaaacagcaccatcagagcaacttttgag
catgccgtcttagctgcagggacagattttcgctccgatcgactgtgggaaatgtatata
aattgggaaagcgagcaaggaaacctcaaggaagttacggtgttgtatgagcgcattctg
aatattccaacacagctttacagccatcatttcacaagatttcgagatcacatacagaat
aatcttcccagagaatatttgttgtcggaaagatttattcagctgcgcagggagctggct
tccatgaatggccacggaggcgaagaatccttacctgcagacagcactccaataggcctt
gaagaactgactgacccagcacagctaacaacagaaattgaaaacatgcgacatagaatc
attgaacttaatcaagaagtcttcaaccacaatgagtatgaagttagcaagaggtggaat
ttcgaagaaggcataaaacgaccatacttccatgtaaagcctttggagaaagcgcagttg
aacaactggagagaatacttggagtttgaaattgaaaatgggtctcatgagcgagtggtg
gtcctgtttgaaagatgtgttatttgttgtgccctctatgaggaattttggatcaagtat
gcaaagtatatggagaaccatggtgctgaaggagtaagacatgtttacagcagagcttgc
ataatacaccttccaaagaagccactggtccatttactctgggcagcctttgaagaacag
caggaaaacattgatgaggcaagaagaattttaaaatcctttgaagagtctgttggaagc
ctagcaatggtccgtttaagaagagtaagtctagagcggcgacttggagatctagaagaa
gcagaacgcttgcttcaggaagcaatggcaaatgccaaatccagtagtgagtcctcattt
tatgcaatcaagcttgctcgccatctactcaaagttcaccatgatcttccaaaagcaagg
aaagtgctggatgaagccattgagagagacaaagacaatgctagactatacctcaacatg
cttgaaattgagtacagtggagatctcaaagaaaatgaaaacaacattattgcgtgtttt
gacagagttgtatatggttccttggctatagaaatgaggattacattttctcagcgaaaa
gtggaattccttgaggattttggctctgacgtggacagacttctgacagcctatgatgag
catcaaaagcttctacaagagcatgaggctttaaaaagaaaagttgagaatggatccgag
gagccagatgaaaagaaagcactcttggatgatacaaccatgttatcgacgcagatgatg
agcggtgacttgcaaactagtcaaactgcgtataactacaatgcttggtatcagtacaat
tatcaaaattcctggaattattcccagtactatacatcaccctcaacctga
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