Pleurodeles waltl (Iberian ribbed newt): 138260359
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Entry
138260359 CDS
T10800
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04140
Autophagy - animal
pwl04148
Efferocytosis
pwl05132
Salmonella infection
Brite
Membrane trafficking [BR:
pwl04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
138260359 (VPS39)
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Gene cluster
GFIT
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NCBI-GeneID:
138260359
NCBI-ProteinID:
XP_069064879
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Position
9:complement(1091344594..1091573614)
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AA seq
875 aa
AA seq
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MHDAFDPVPILEKLPLQIECMAAWEDWLLIGTKQGHLLLYRIKKETVGCNQFEVTLEKSN
KNFSKKIQQIHVVPNFKILVSLLDSNVYVHDLLTFQQITTVSKAKGASLLACDLQHTHTG
EEVLRMCVAVRKKLQLYFWKDRDFYELQGDFSVPDVPKSMAWCESSICVGFKRDYYLIRV
DGKGSIKELFPTGKQLEPLVAPLADRKVAVGQDDLTVVLNEEGTCTQKCALNWTDIPMAM
EHQPPYIVAVLPRYVEIRTFEPRLLVQSIELQRPRFIASGGTNIVYVASNHFVWRLVPVS
IATQIQQLLQDKQFELALQLARMKEDSDSEKHHQINHIQNLYAFNLFCQKRFDDSMQVFA
MLGTDPTHVIGLYPDLLPTEYKKQIQYPNPVPGLSGAELEKAHLALIDYLAQKRSHLVKQ
LNDTDHHSSTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNMALVAPLLRLENNHCHIE
ESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQRLGADN
LSLVFPYSVWVLRDFPEDGLKIFTEDLPEVEALPRKEVLNFLMENFRPLAIPYLEHIIHI
WEETGPQFHNCLIKLYCEKVQMLMKKYIESSNGLPLVPAGSEEGELGEYRSKLLAFLEIS
NFYEPDGLISDFPFNGLLEERALLLGRMGKHEHALVIYVHVLKNIRMAEDYCNKYYDRTQ
EGSKDVYLSLLRMYLSPPDVHCLGPIMVKLEEPQANLQAALNVLELHHGKLNTTKAIHLL
PANTQISEIRTFLEKVLEENAQRKRFNQVLKNLLHAEYLRVQEERISHQQVKCIITEEKV
CNVCKKKIGNSAFARYPNGVVVHYYCSKDVSSVDT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgccttcgatccggtgcccattctagagaaactgccgctgcagatagaatgt
atggcagcttgggaggattggcttcttattggtaccaagcaaggtcatctccttctgtac
aggatcaagaaagagacagtaggctgcaaccagtttgaagtgactctggaaaaatccaac
aagaacttttccaagaaaatacaacagattcacgttgtcccaaattttaaaattctggtc
agcctactagacagtaatgtgtatgtccatgacctgctgacatttcaacaaatcaccaca
gtgtccaaagctaagggagcatctttgctggcatgtgacctacagcatactcacactgga
gaagaagttttacggatgtgtgtcgcagtgagaaaaaagttgcagctttacttctggaag
gaccgggatttttatgaactgcaaggggacttcagtgtgccagatgtacctaagtccatg
gcatggtgtgagagctccatctgtgttggcttcaaaagggactattatctaataagggtc
gatggaaaaggctccatcaaagaactgtttccaactgggaaacagctggaacctctggtg
gcccctttggcagacagaaaggtagcagttggccaggatgaccttactgtggtgctgaac
gaagaggggacgtgtacccagaaatgtgccttaaactggactgatattcccatggctatg
gaacatcagcctccctacattgttgctgtactgccaagatatgtggaaattcgcacattt
gaacctcggctacttgtacagagcatagagcttcaaaggcctcgtttcatcgcctctgga
ggcacaaacattgtgtacgtggccagtaaccattttgtgtggcggctagttcctgtttct
attgcaacacagattcagcagctccttcaggacaagcagtttgaactggctcttcagctt
gctagaatgaaagaggactccgacagtgaaaaacatcatcagattaaccacattcagaat
ctttatgcctttaaccttttctgccaaaagcgttttgatgactctatgcaagtatttgcc
atgcttggaacagatccaactcatgtgattggcctgtatcccgacttgctacccaccgaa
tacaagaagcaaattcagtatcccaacccagtgccagggctgtctggtgcagaactggag
aaggcacacttggcactcatagactatcttgctcagaagagaagtcaccttgtaaagcag
ctgaatgacactgaccaccactcgagcacatcacccttaatggagggaacccccaccatc
aaatctaggaagaagctgctgcagataattgacaccacacttctgaagtgctaccttcat
accaacatggctttggtggcaccgcttttgaggctggagaacaaccattgtcacattgag
gagagtgaacatgttttgaagaaggcacacaaatacagcgagttgataatcctgtatgag
aagaaggggttgcatgaaaaagctcttcaggttctagtggatcaatccaaaaaagcaaac
tcgccattgaagggccacgagaggactgttcagtatcttcaacggctaggggcagataat
ctatcccttgtgttcccctattcagtatgggtgcttcgagactttccagaagatggtttg
aagatatttacagaggatctacccgaggtggaagctctaccacgcaaagaagtgcttaat
ttcttgatggagaacttcagaccactagctattccatacttggagcacatcattcatatt
tgggaagagactggtccacagttccataattgcctgatcaagctttactgtgagaaggtt
cagatgttaatgaagaaatatattgaatcatctaatggtctacccctggtcccagctgga
agcgaggaaggggaattgggtgaataccgtagcaaactccttgcctttctggagatatca
aacttctatgaacctgacgggctcatcagtgactttccatttaatggattgttggaagaa
cgtgctctcctactgggccgtatggggaagcatgaacatgctctagtcatttatgtccac
gtcctgaagaacataagaatggcggaagactactgcaacaagtactatgatcgcactcaa
gagggcagcaaagatgtgtatctgtccttgctgcgaatgtacctgtcaccaccagacgtt
cactgtctagggcctatcatggtgaagctagaggaaccccaggcaaatctccaagcagct
ttgaatgttttggagctccatcatggaaaactgaatacaacaaaggctattcaccttttg
ccagcaaacacgcaaatttcagagataagaacgttcttggagaaggtcctggaggaaaat
gcacaacggaagcggttcaaccaagttttaaagaatctgctgcatgcggagtacttgagg
gtgcaagaagagaggatatcacaccaacaagtgaaatgtatcattacagaggagaaagtg
tgtaatgtgtgcaagaaaaaaattgggaacagtgcattcgcccggtaccccaatggtgta
gttgtgcattattactgctccaaagatgtcagcagtgtggacacttga
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