Pleurodeles waltl (Iberian ribbed newt): 138260442
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Entry
138260442 CDS
T10800
Symbol
RBM25
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138260442 (RBM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pwl03041
]
138260442 (RBM25)
Spliceosome [BR:
pwl03041
]
Complex A
U1 snRNP components
U1 related factors
138260442 (RBM25)
Complex B
138260442 (RBM25)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
138260442
NCBI-ProteinID:
XP_069065033
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All DBs
Position
9:complement(1141946906..1142389989)
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AA seq
955 aa
AA seq
DB search
MILVGSSVLAGAARRLSSRVRHVTQPPLSVGRRALPVLCSRGLATKPWSASPRPPDPRPS
GPLSRQGRVATMSFPPHMNRPPMGIPTLPPGIPPPQFPGFPPPVPPGTPMIPVPMSLMAP
APTVLLPTSMSMVNKHLGPRKDLLGLKSREIDENSGPTTTVFVGNICEKASDMLIRQLLA
KCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQ
LDEWKAKKRASNGNAKPESTTDDDDLDDETVKLDQQIKQTIEVLIRDYSSELNAPSQESD
SQPRKKKIKEKKEDSGGGVTERQISSDVRTVPLERSSFGVKEDIHAIEMEDDKRDLISRE
ISKFRDTHKKLEEEKGKKEKERQEIEKERREREREREREKRDREKEREREKEKERERERD
RTKDRDRDRDRDREREREKERDRLRGISNDRSREKSRDRERERILERERERERERERERE
RERERERERERERERDRDRDRDREKEKKRDREEDEEDAYERRKLERKLREKEAAYQERLK
NWEIRERKKGREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRPYLTTPYT
LEGGKRNTCSHSMGSAFQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAE
LQRMEEEAERRRQPPVKHQPMQQLHQLPPPPESEEEEEEKSEMEERREELVQEEEEREQR
PCLKPTLRPISSAPSVSSASGNATPNTPGDESPCGIIIPHENSPDQQQPEEHRLKIGLSL
KLGTSNSPSQTNAVKRKKLPVDSVFNKFEDEDNDEAPRKRKLVPLDYGEDEKGAAGAKGN
VNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDTTLMERRIRPWINKKIIEYIGEEEA
TLVDFVCSKVMAHSTPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggtaggctcgtcagtgctggctggcgctgcacgacgactgtcctcgcgggtg
cgtcacgtgacccagccccccctttccgtcggccgccgcgctctgcctgttctgtgttct
cgcggcctagcgaccaagccttggagcgcgagcccccggccgccggatccgcgaccaagt
gggcccttgagccgtcagggacgggttgccacaatgtctttcccgccacatatgaaccga
ccaccaatgggaattccaactttacctcctggaattccacctcctcaatttcctggtttc
cctcctcctgtacctcccgggaccccaatgattcccgtaccaatgagcctaatggctcca
gctccaactgttttgttacctacctctatgtctatggttaacaaacatctgggaccaaga
aaagacctcttaggtcttaagagtagagaaattgatgaaaacagtggcccaactactaca
gtctttgtgggaaacatatgtgagaaggcctcagatatgctcatacgacaactactggca
aaatgtggcctggttttaagctggaaaagagtgcaaggggcatctgggaagctgcaagcg
tttggattttgtgaatacaaggaacctgaatctacactgcgggctttacgtttacttcac
gaccttcagattggagagaaaaaactcctagtaaaagtggatgcaaagacaaaggcacaa
ctggatgagtggaaagcgaagaaaagggcctctaatgggaatgccaaacctgaatctaca
actgatgatgatgacctggatgatgaaacagtgaaactagatcaacaaattaaacaaaca
atagaagtgttaatacgggattattctagtgaattgaatgctccctcgcaggaatcagat
tcccagccaaggaagaagaagataaaagagaaaaaggaagactccggtggtggtgttact
gagaggcagatctcttctgatgtgaggaccgtccctctggaacgctcttcatttggagtt
aaggaggacatacatgccattgaaatggaagatgacaagagagacttgatatctcgagaa
attagtaaattcagagatacgcacaagaaactggaggaagaaaaaggcaaaaaggagaaa
gaaaggcaggagattgaaaaagaaagaagagaacgagagcgcgagcgtgaacgtgaaaag
cgagacagggaaaaagagagggagcgtgaaaaggagaaagagcgtgaaagagaacgggac
cggacaaaagatagggacagggatagagaccgagatcgtgagagagaacgtgaaaaggaa
cgagaccgccttagaggaataagcaacgatcggagcagggagaaaagcagagaccgagag
cgcgaacgcatcttagaacgggaacgagagcgtgagcgggaacgtgagagagaacgagaa
cgggagagggagagagaaagagaaagggagcgtgaacgtgaacgtgaccgcgatagggac
agggatagggagaaagaaaagaaaagggaccgagaggaagatgaagaagatgcatatgaa
cgaagaaagttggagagaaaactccgtgagaaggaagctgcttatcaggagcgccttaaa
aactgggaaattagagagcggaagaaaggcagagagtatgaaaaagaagctgaacgggag
gaggaaagacgaagagaaatggcaaaagaagctaaaaggttaaaagaatttttggaagat
tatgacgatgacagagatgatcccaaatattacaggccttatctaactactccatacact
cttgagggagggaagagaaacacctgttcacattccatgggaagtgcatttcagaagagg
ttgcgagatcgagagaaagaaatggaagcggatgagcgggacaggaaacgggagaaagaa
gaacttgaggaaatcaggcagcggcttttagctgaaggacatccggacccagatgctgag
cttcagcgaatggaagaagaggctgaaagacgcaggcagccaccagtaaagcatcagcca
atgcagcagctgcatcagctcccaccaccgccagaatctgaggaagaggaagaagagaag
tctgagatggaagaaagaagagaggaactcgttcaggaggaagaagagcgagagcagaga
ccttgtcttaaacctaccctgcggcccattagttcagccccatcggtttcttctgccagt
ggaaatgccacacccaacacccctggggatgaatctccttgtggtatcatcatacctcat
gaaaactcaccagaccaacagcaaccagaggaacatagactaaaaataggactcagtctc
aaattgggtacatcgaatagtcccagccagaccaatgctgttaagagaaagaaacttcct
gttgacagtgttttcaataaatttgaagatgaggacaatgatgaagctccccgaaaaaga
aaactagttcctttggattatggagaagatgaaaaaggagcagcgggcgccaaggggaat
gtgaacactgaagagaaacggaaacacataaagagccttattgaaaagattccaactgcc
aaacctgagctgtttgcttatcctcttgactggtccattgtcgacacaacccttatggag
cgacgaattagaccatggattaataaaaagatcatagaatacattggtgaagaagaagct
acactagttgattttgtgtgttcaaaggtaatggctcatagtacacctcagagtatattg
gatgatgttgctatggttttggatgaagaggccgaagtttttattgtgaaaatgtggcga
ttgttaatatatgaaacggaagccaagaagattgggctcgtgaagtaa
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