KEGG   Pleurodeles waltl (Iberian ribbed newt): 138260454
Entry
138260454         CDS       T10800                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04510  Focal adhesion
pwl04517  IgSF CAM signaling
pwl04518  Integrin signaling
pwl04519  Cadherin signaling
pwl04520  Adherens junction
pwl04530  Tight junction
pwl04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    138260454 (ACTN1)
   04518 Integrin signaling
    138260454 (ACTN1)
   04519 Cadherin signaling
    138260454 (ACTN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    138260454 (ACTN1)
   04520 Adherens junction
    138260454 (ACTN1)
   04530 Tight junction
    138260454 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    138260454 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pwl04131]
    138260454 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pwl04812]
    138260454 (ACTN1)
   04147 Exosome [BR:pwl04147]
    138260454 (ACTN1)
Membrane trafficking [BR:pwl04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    138260454 (ACTN1)
Cytoskeleton proteins [BR:pwl04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     138260454 (ACTN1)
Exosome [BR:pwl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   138260454 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   138260454 (ACTN1)
  Exosomal proteins of bladder cancer cells
   138260454 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 EF-hand_8 XisI
Other DBs
NCBI-GeneID: 138260454
NCBI-ProteinID: XP_069065068
LinkDB
Position
9:complement(1146903945..1147127400)
AA seq 891 aa
MDHYDTQQNDYMHPEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIDNIEEDFRD
GLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNAK
MTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCA
LIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDQKAIMTY
VSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRA
PENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMV
SDINNAWGGLEHAEKGYEEWMLSEIRRLERLDHLAEKFRQKANIHESWTDGKEAMLQQTD
YERASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSLSVNARCQKICD
QWDNLGVLTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTI
EEIQGLSTAHEQFKATLPDADKERQAILGIHNEVAKIAQTYHVNMAGTNPYSTISPQEIN
TKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFAAQANVIGPWIQTKMQEIGRISIEMH
GTLEDQISHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLL
TTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGRLGPEEFKACLISLGYD
IGNDAQGEVEFSRIMSIVDPNRFGLVTFQAFIDFMSRETADTDTADQVMASFKILAGDKN
YITADELRRELPPDQAEYCIARMAPYNGHDGVPGALDYMSFSTALYGESDL
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggaccactacgacacccagcagaacgactacatgcacccggaggacgactgggacagg
gacctgctcctggaccccgcctgggagaagcagcagaggaagaccttcacagcctggtgt
aactcccacctgaggaaagctggaacgcagattgacaacatcgaggaagacttccgggat
ggcctcaaactcatgctgctgctcgaggtcatttcaggcgaacgtctggccaagcctgaa
cggggaaagatgcgagtccacaagatctccaacgtgaacaaggctctggacttcatcgcc
agcaaaggggtcaagctggtgtccattggcgctgaagaaatcgtggatggcaacgctaag
atgacgctcggaatgatctggaccataattctgcgcttcgccatccaagatatctctgta
gaagaaacatctgccaaagaggggcttctcttgtggtgtcagaggaagaccgccccctac
aagaatgtgaacatccagaacttccatataagctggaaggatggccttggcttctgcgcc
ctcatccacaggcaccggcccgagctcatagactatggaaagttaaggaaggacgacccc
ctcactaacctaaacaccgcttttgatgtggctgagaagtacctcgacattcccaagatg
ctggatgcagaagacattgttggaactgcccgtccggaccagaaagccatcatgacctac
gtgtctagcttctaccacgccttctcaggagcacagaaggctgaaacggcagcgaatcgc
atctgcaaggtgctggcggtcaaccaggagaatgagcaactcatggaagactacgaaaag
ctggccagcgacctgctggagtggatccgccgtaccatcccctggctggagaaccgggcg
cccgagaacaccatgcaggccatgcagcagaaactggaggacttccgtgactaccgccgc
ctccacaagccccccaaggtccaagagaagtgccagctagagatcaacttcaacactctg
cagaccaaactgcggctcagcaaccggccggccttcatgccttccgagggaaagatggtg
tcggacataaacaacgcatggggaggcctggagcatgccgagaagggctacgaggaatgg
atgctcagtgaaatacgccggctagagagactggatcacttggccgagaagttcaggcag
aaggctaacatccatgaatcgtggaccgatggcaaagaagcgatgctgcagcagacggat
tacgaaagggcctcgctgtcggagatcaaagccctgctgaagaaacacgaggccttcgag
agcgacctcgcggcgcaccaggaccgcgtggagcagattgccgccatcgcgcaggagctc
aacgagctggattactatgattcgctgagcgtgaatgccaggtgccagaagatctgcgac
cagtgggataacttgggggttctcacccagaaacgccgcgaggccttagagcgaaccgag
aagcttctagaaaccattgatcagctgtacctggagtatgccaagagagcagcccccttc
aacaactggatggagggcgccatggaggatctgcaggacaccttcatcgtccacaccatc
gaagagatccagggactcagcaccgcccacgagcagttcaaggccactctgccagatgcg
gacaaggagaggcaggccatcttgggcattcacaatgaggtcgcgaagatcgcccagacc
taccatgtcaacatggcggggaccaacccatactccaccatcagcccgcaggaaatcaac
accaagtgggaccacgtccgacaattagtgccgcgaagggatcaggccctgacggaggag
catgcgcggcagcagcacaacgaacgcctccgcaagcagtttgctgcccaagccaacgtc
attgggccatggatacaaaccaagatgcaggagatcgggcgcatttccatcgagatgcac
ggcactctcgaggaccagatcagccacctgcggcaatatgagaagagcatcgtcaactac
aaaccaaagattgaccagctggagggtgaccaccagcagatccaagaagcacttatcttc
gacaacaagcacaccaactatactatggagcacattcgagtgggctgggagcaactcctc
accacaatcgcccggacaatcaacgaggttgagaaccagatcctgacccgagatgccaaa
ggcatcagccaggaacagatgaatgagttccgggcttcattcaaccacttcgacagggac
cactctggcagactggggcccgaggagttcaaggcctgcctaatcagtttgggctacgat
attgggaacgacgcgcagggagaagttgagttttcccgcattatgagcattgtggacccc
aaccgctttggattggtgacgttccaggccttcatcgacttcatgtcccgcgagacggcc
gacacagacaccgcggaccaagttatggcttccttcaagatcctagctggagacaagaac
tacatcacagcggatgagctgcgccgagagctgcccccagaccaagcggaatactgcatt
gcaaggatggcaccgtacaatgggcatgacggcgtaccaggagccctggactacatgtcc
ttctccacagcactctatggcgaaagtgacctttaa

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