Pleurodeles waltl (Iberian ribbed newt): 138260509
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Entry
138260509 CDS
T10800
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138260509 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pwl01001
]
138260509 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138260509 (TAF1)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138260509 (TAF1)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
138260509 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138260509 (TAF1)
Protein kinases [BR:
pwl01001
]
Serine/threonine kinases: Other
TAF1 family
138260509 (TAF1)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138260509 (TAF1)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
138260509 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Ribosomal_L44
Motif
Other DBs
NCBI-GeneID:
138260509
NCBI-ProteinID:
XP_069065203
LinkDB
All DBs
Position
2_1:complement(29811868..30102763)
Genome browser
AA seq
1972 aa
AA seq
DB search
MSDSESDEERPFSLTGFLFGNINEAGQLEDESVLDKESKKHLAGLGALGFGSLITEITTD
DGSQGDGASTDDGWIQSTDDAIDYSDITEVAEDETRRYRQAMGNLQPACRTDDDDDDYDA
DCEDIDSKLMPPPPPPPVTAKKEDEKGQPGSAVSEDGDSIILPSIIAPSSAALEKVDFSS
SSDSESELGPQEARQKESKDDNLTLPLAGIMQRDATKQLPCVTDLFPEFRPGRVLRFLRL
FGPGKNVLSVWRSARRKRKKKHRELSQDAPPQEGEVEMETEGAAEEMDVATETKSHWEYE
YAPPPPPEQCLSDDEITMMAPVESKFSLSAGDTDKVADTKPKVAEWRYGPAQLWYDMLGV
PEDGSGFDYGFKLKDAQNNGSKKTGEVRNQLWEGKELTDESGNLLADEHFLMVTQLQWED
DVIWNGEDVKHKVTKTQRASLAGWLPSSMTRNATAYNAQQGLSRSGSLLNLPVPLLQKPG
ITSILGMSKGKEKHPTDQQGSMEDDKQWFSIFPIDNEELVYGRWENNIIWDDQAMGKILE
PPVLMLDPNDENIILEIPDEKETTTSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNM
SQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFH
RPNLKKYSFGTLSIPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDG
DLILAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHP
GQLLQAFENNLFRSPIYLHKMPETDFLLIRLRQGYYIRELVDIFVVGQQCPLFEVPGPNS
KRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTG
MDSNWWVLKPDFRLPTEEEIRAMVSPENCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENE
EDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQK
QDDKEPQPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTE
QARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDS
DFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEDSCHEREKPKKDRKDRKGM
STGSATSGGSHKDDDTASVTSLNSAASGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAY
SRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKM
KERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEE
LIKVEGTKIVLGKTLIESADEVRRKSLVLKFPKQPLPPKKKRRVGTTVHCDYLNRPHKSI
HRRRTDPMVTLSSTLESIINDLRDMPNTYPFHTPVNGKVVKDYYKIILRPMDLQTLRENV
RRRMYPSREEFREQVELILKNSITYNGPKHSLTQIAHAMLELCDEKLREKEDRLARLEKA
INPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHYPVNKKFIPDYFKVIVQPMDLESIR
QNISKHKYQNRDLFLHDVRLIFENSNKYNGVHSPYTKTAQEIVNICQQTLAEYDEHLTQL
EKDISTAKEAALDEADLESFEPMTPGPYTPQPPDYYDNNTSMSMSHDASMYQDEDNLLSG
DTPTNTPEKRGAMRRMMRLGRGRLGEEDSDVDIEGFEDDDDDDGKPKTPAPEMDDDGDLG
DEEEGSVRQPQASVLYEDLRMSDGEDDDDGSDEEGDNPFSAIQLSESGSDSDLDSRGMRH
KQPHMLQENTRMGMENDESMMSYGGDGGGITHVIEDSNISYESYEERGPKSNTRDTSFSS
MGGYGISEEDEDEEEERRLGPSVLNQVRLSEDDDSEEFHSIGGDSDLDSDNE
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagagcgacgaggaacgtcccttctccctcaccggcttcctcttcggg
aacatcaacgaggcggggcagctggaggacgagagtgtgctggacaaggaatcgaagaag
cacttagctggccttggagcgctgggatttggcagcctcatcacagagattaccacagac
gacgggagccagggcgatggagcaagtacagatgatggctggatccaaagcactgacgat
gctattgattactctgacatcacggaggtggcagaggacgagacgcgcaggtacaggcag
gccatggggaacctgcagcctgcatgcaggacagatgatgatgacgacgactacgatgct
gactgtgaggacatcgattcgaagctgatgccaccaccgcctcctccgccagtcactgcc
aagaaagaggacgagaagggccagccgggctccgctgtctcagaagatggcgatagcatc
attctcccatccatcatcgccccatcatctgctgccctggagaaggtcgacttcagcagc
tcttcggactcggagtctgagctgggtccacaggaagcaagacagaaggagtcaaaagat
gacaacctcacactgcctctggcaggcatcatgcagcgtgatgccaccaagcagctgccc
tgtgtcactgacctcttccctgagttcagaccaggcagggtgctgcgtttcctccgtctc
tttggaccagggaagaatgtgctgtcagtctggcgcagcgcccggcggaaaaggaagaag
aagcaccgcgagctttctcaggatgcaccacctcaggagggggaggtggaaatggagacc
gagggcgcagcagaggaaatggatgtagccactgagacgaagtctcactgggagtacgag
tatgctcctccgcctccacctgagcagtgcctctccgatgacgagataacaatgatggct
cccgtggagtccaagttctctttgtcggctggtgacactgataaagtggctgatacaaaa
cccaaggtggcagagtggcgctacgggcctgcccagctctggtatgacatgcttggtgtc
cctgaagatggcagcggatttgattatggctttaagctgaaagatgcacagaacaatggg
tctaagaaaacgggcgaggtgagaaatcagctatgggagggcaaggaattgactgatgag
tctggaaatctcttggcagacgagcactttttgatggtaacacaactgcaatgggaagac
gatgtcatctggaatggggaggacgtgaagcacaaagtcaccaagacacagagagccagt
ctggccggctggcttccctccagcatgactaggaatgccactgcatacaacgctcagcaa
gggctgagtcgcagtggatctctgctcaatctgccagttccgttgttgcagaaaccaggc
atcaccagcatcctgggcatgtccaaggggaaggagaagcatccaacagatcagcaaggt
tccatggaggacgacaagcagtggttttccattttccccattgataatgaagagctggtg
tatggtcgctgggaaaataacattatctgggatgaccaagccatggggaagatactggag
ccacccgttctgatgttggaccccaacgatgaaaacatcattctcgaaattccagatgaa
aaagagacaaccacgtcaaattctccatccaaggagaacaagaaagagtcctctctgaag
aagagtcggatccttctggggaaaactggggtcataaaggaggagccgcagcagaatatg
tctcagccggaggtgaaggacccatggaacttatccaatgatgagttttactatccgaag
cagcagggcctgcggggaacgtttggaggaaacatcattcagcactctatcccagcagtt
gagctgcgtcagcccttcttcccaacccacatgggccctatgaagctgcggcagttccac
cggcccaacctgaagaagtattcctttggcacgctgtccatccctgggccgcactccgtg
cagcctctcctcaagcacatcaagaagaaagcaaagatgagagagcaagagcgtcaggcg
tctggtggaggcgagatgttcttcatgcgtacgccacaagacctcacaggcaaagatggt
gatttaatcctggctgagtacagtgaggagaatgctcccctgatgatgcaggttggcatg
gcaaccaagatcaagaactattacaagcgtaaacctggaaaagatcccggggcccccgac
tgtaaatatggggagactgtttactgtcacacctcgcccttccttggatccctccaccct
gggcagctgctgcaggcttttgagaacaatctgtttcgatctccaatctacctgcacaag
atgcctgagactgacttcttgctcatccgcttacgtcaaggctactacatccgtgagctg
gtggatatttttgtggttgggcagcagtgtccgctctttgaggttccaggcccaaactcc
aaacgtgccaacacgcacattcgagactttctccaggtttttatttatcgccttttctgg
aagagtaaggatcggccacgaaggatacgcatggaggatatcaagaaagccttcccttcc
cactcggagagtagtatcaggaagcgactgaaactctgtgcagacttcaagcgaacagga
atggactctaattggtgggtgctgaagccagattttcggttaccaaccgaggaagagatt
cgagccatggtatcccccgaaaattgttgtgcttattatagtatgattgcagctgaacag
agactcaaggatgcagggtacggtgagaagtccttctttgccccagaagaggagaatgag
gaggattttcagatgaagattgatgatgaagtgcgcaccgctccatggaacacaacccgg
gccttcatcgctgccatgaaaggcaagtgtctgctggaggtgacgggagtcgcagatccc
actggctgtggagaaggattctcatatgtgaagattccgaacaaacccacacaacagaag
caagatgacaaggagcctcagcctgcaaagaagaccgtgactggcactgacgctgatctc
cgtcgtctctccttaaaaaatgctaagcaactgctgagaaagtttggagtccctgaggaa
gagatcaagaagctgtctcgttgggaagttattgacgttgtgcgaacgatgtccacggag
caggcgcgatctggcgagggccccatgagcaagttcgctcgggggtcgcggttttcagtg
gcagagcatcaggagcggtacaaggaggagtgccagcgcatctttgatcttcagaacaaa
gtcttggaatcaacggaggtgctttcaacagataccgatagcagctctgcagaggatagc
gactttgaggaaatgggaaaaaacattgagaacatgctacagaacaagaagactagttcc
cagctgtctcgcgagcgtgaagaacaggagcggaaggagcttcagaggatgttgatgggg
gaggacagctgccatgaaagggagaagcccaagaaggacagaaaggaccgaaaggggatg
tcaaccggctctgctacctccggaggttcacacaaggatgatgacacagcctccgtgacc
agcttgaattctgctgctagcggccgtcggctgaagatctaccgcacattccgagatgaa
gacgggaaggagtatgtgcgttgtgagaccgtccgcaagccatctgtcattgatgcatac
agccgaatacgcaccaccaaagatgacgagttcatccggaagtttgccttgttcgatgaa
caacaccgtgaggagatgagaaaagagcgacgacgaattcaagaacagcttaggagatta
aagcgtaatcaagaaaaggaaaaactgaagggacctccagaaaagaagcccaaaaaaatg
aaggagcgaccagaccttaagctcaagtgtggagcctgcggcgctattgggcacatgagg
actaacaagttctgtcctctttattaccaaaccaacgcgcctccttccaacccggtggca
atgacagaggagcaagaggaagagcttgagaagacggtgatccacaacgacaacgaggaa
ctcatcaaagtcgaaggcaccaagattgtcttggggaagacgcttattgagagtgcggat
gaggtgcggaggaagtccttggtcctgaaattccctaagcagccacttccacctaagaag
aaacgacgagttgggaccacagtgcactgtgattacctaaaccggcctcacaagtctatc
catcggcgacggacggatcctatggtcaccctgtcttcaacactggagtccattatcaat
gatttgagagatatgcccaatacgtatccctttcacacaccggtgaacggcaaggttgtg
aaggattattacaagatcatccttcgtcccatggacctgcagaccctgcgtgagaatgta
cgccgccgcatgtacccttcccgcgaggagttccgtgagcaggttgagcttattttgaag
aacagcattacctacaatgggcccaaacactccttgacccagatcgcccatgccatgctg
gagctgtgcgatgagaagctgcgagagaaagaagaccgtttggctcgcttggaaaaagcc
atcaaccctctccttgatgacgacgaccaagtagccttttcctttatcctggataacatt
gttactcagaagatgatggccgtgccagattcatggccattccattatccagttaacaag
aagttcattccggactatttcaaagttattgtccaaccaatggacctggagtcgattcga
cagaacatctccaagcacaaataccagaaccgggacctcttcttgcacgatgtgaggctg
atttttgaaaacagtaacaaatataatggcgtccacagtccatacacgaagacagcccag
gagattgtcaacatttgccaacagactctggccgagtacgatgaacacttgacacaacta
gagaaggacatctccactgcgaaagaagccgctctggatgaagcagacctggagagcttt
gagccgatgacgcctggaccgtatacgccgcagcctcctgattactatgacaacaacaca
tcgatgagtatgtcccacgatgcctccatgtaccaggatgaagacaacttgttgtccgga
gacactcccacaaacacgccagagaagcgaggggccatgagacgcatgatgcgtttaggc
cgaggtcgattaggtgaggaagactcagatgttgatattgaaggctttgaagatgacgac
gatgatgatggaaagcccaagactccagctcctgagatggatgacgatggtgacctcggc
gatgaagaggagggatccgtacggcagcctcaagccagtgtcttgtacgaagatttacgg
atgtctgatggagaggatgatgatgatggaagtgatgaagaaggtgataaccccttctca
gccatccagcttagcgagagcggcagcgactctgatttggactctcgtgggatgagacac
aaacagccccacatgttgcaggagaacacgcgcatgggcatggagaatgacgaaagcatg
atgtcctatggaggagatggagggggtatcacacatgtgattgaggacagtaacatcagt
tatgaaagctacgaagagcgaggcccaaagtccaacacgcgcgatacaagtttcagcagc
atgggaggttatggaatctcagaggaagatgaggatgaggaggaagaacgccgcctgggg
ccgagcgtgctgaatcaggttcgtctgtcagaagatgacgatagcgaggagttccactcc
atcggtggagacagtgatctagattctgataacgaataa
DBGET
integrated database retrieval system