Pleurodeles waltl (Iberian ribbed newt): 138260886
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Entry
138260886 CDS
T10800
Symbol
FGD1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
138260886 (FGD1)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
RHG20_PH
PH_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
138260886
NCBI-ProteinID:
XP_069065451
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Position
10:complement(10334435..10561076)
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AA seq
1013 aa
AA seq
DB search
MKIRGCRTGSPWPTGPGEGPGTRLLPGATLGPPGLCPPHGSPAPLPHLQTVSPPGVWAPP
SLTAVCKTPPPDTSQGWALTSSSKKDTSPPTLSFCSLFTEAGTGNRHWRAVVTARSGTGP
SQGAPLLVKSFSLEPGPGQEQRETPQRLCSDPGPCRSNGTPKEPPTPKPVASKRPPGPKP
QVPPKPAHLQSARKTQLPDAIPPPPSRPLPADPRLPKSPLPRTDSKDELGLSAVSSLIEK
FEREPIILAVDRSALCPSPGTDSTLETGSNSDASQASGPPERRGSLESSCSLGEHLHKLM
DMAELQDPPERGGYTTDSLERRHCLRVSAALPAHDSGGKVANRDSGIDSISSPSYSEEIC
FISGEQALDAKDSEDCSEQAAGTTALPILTRKRRSMRDSELDSDLEEGSADESDVHQIQR
LDSCECTTHRKVFHIANELLLTERAYVSRLHLLDQVFCARLMEEARSRGSFPVEVVMGIF
SNICSIYCFHQQFLLPELEKRMTEWDRNPRIGDILQKLAPFLKMYGEYVKNFDRAMELVN
SWMERSTPFKVIIHEVQSEEICGNLTLQHHMLEPVQRIPRYELLLKDYLQKLPEGSCDSR
DAEKSLQLIATAAEHSNAAIRKMERMHNLLKVYELLGGEEDIVSPTNELIKEGHILKLSA
KNGTTQDRYLILFNDRLLYCVPKLRLIGQKFSVRARIDVDGMELKESSNLNPARTFLVSG
KQRSLELQARTEEEKKDWIQAIQVTILKHEQSLETLKLNLSHREDDDSPPNSPVRSRFMN
TDLGKRAPTPIREKEVTMCMRCREPFNSITKRRHHCKACGHVVCGKCSEFRARLVYDNNR
TNRVCTDCYTALHGDSPVLHSQAPQRRRSILEKQASVVAENSVICSFMHYMERGGKGWHK
GWLVVPENEPLVLYIYGAPQDVKAQRSLPLIGFEVGPPEAGDRIERRHAFKMSQSHLVFY
FSAETEELQRRWTEVLGRAGRGEEWTHGCAIMEDDEEAEGSGSTTILTGAGNT
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccgggggtgcaggacgggcagcccctggcccacaggtcccggtgaggggccg
gggacccgcctgttgcccggtgccaccctgggcccgcccggcctttgtcctccccatggc
tcacctgcgcctctccctcacctgcagacagtcagccctccaggtgtgtgggccccgccc
tctctgacagctgtttgtaagactccgccccctgacacctcacagggctgggctctcacc
tcctcttcaaagaaagacacctccccacccaccctctccttctgctccctcttcactgag
gcaggcactgggaaccggcactggagagctgtagtcaccgctcggtctggcactggcccc
tcccaaggagcccccttgctggtgaaaagcttctctctggagccaggacctggacaggag
caacgagagacccctcagagactctgctcggaccccggaccctgcagaagcaatggcacc
cccaaggagccccccacacccaaacctgtagcctctaagcgcccacctggcccgaaacct
caagtacctcccaaaccggcccacctacagagcgcgaggaagacccagctgcctgacgcc
atcccgccgcccccatcccggccactgcctgcggacccccggctacccaagagccccctg
ccccggaccgacagcaaggatgagctggggctgtcggcagtatcctctctcatcgagaag
tttgaaagagagcccataatcctagcggtggatcgaagcgccctgtgtcccagcccaggg
acagactcgactctggagactggatccaacagtgacgcatcgcaggccagcggtcctcct
gagcggcggggctccttggagtccagctgcagcctgggtgaacatttgcacaagctgatg
gacatggcagagctccaggacccaccagagcggggagggtataccacagacagcctggag
cgtcggcactgcttgagggtctcggccgccctcccggctcatgatagcggtgggaaggtg
gccaacagggacagcggcatagacagtatcagttcaccctcctacagcgaggaaatttgc
tttatcagtggggagcaggcgctggacgccaaggactctgaggactgctccgagcaggca
gcgggcaccaccgcactgcccatcctcacccgcaaaaggcgctcaatgcgggactctgag
ttggacagtgacctagaggagggtagtgcggatgagtcagatgtgcaccagatacagagg
ctggactcctgtgagtgcacgacccaccggaaggtgttccacatcgccaatgagctcctg
ctcaccgagagggcatacgtgtcccgcctgcatctgctggaccaggtgttctgtgccagg
ctgatggaggaggcccgcagcaggggctcgttccctgtagaggtggtaatgggtatcttc
tccaacatctgctccatctactgcttccaccagcagttcctgctgcctgagctggagaag
cgcatgacggaatgggacaggaacccacgcatcggggacatcctccagaagctggcgccc
ttcctcaagatgtacggcgagtatgtcaagaacttcgacagggccatggagctggtcaac
agctggatggagcggtcaacgccattcaaagttatcattcatgaggtgcagagcgaggag
atctgcgggaacctgacgctgcagcaccacatgctggaaccggtgcagagaatcccgcgc
tacgagctgctcctcaaggactacctccaaaagctgcccgagggctcctgcgacagtcgg
gacgccgagaaatctctgcagctgattgcgaccgccgccgaacactccaacgcagcaata
cggaaaatggaaaggatgcacaacctgctgaaagtctatgagctcctggggggtgaggag
gatattgtgagcccaaccaatgagcttatcaaggaaggccacatcctgaagctctctgcc
aagaatggcaccacacaggacaggtacctcatactgttcaatgaccggttgctgtactgc
gtgcccaagctgcgcctgattggacagaagttcagcgtgcgcgcgcggatcgacgtggat
gggatggagctgaaggaaagcagtaacctcaacccggcgcggaccttcctggtgtcaggg
aagcagcggtccctggagctgcaggcccgaactgaagaggagaaaaaagactggattcag
gcaatccaggtcaccatcctaaagcacgagcagtccttggagaccctaaaactgaacttg
tcacacagggaagacgacgactcgcccccgaactccccggtacgttccagattcatgaac
acggatctgggtaagcgcgcccccacgcccatccgggagaaggaggtcaccatgtgcatg
aggtgccgcgagcccttcaactccatcaccaaacggaggcaccactgcaaggcctgcggg
catgtggtgtgtggaaagtgctccgagttccgagcgcggctggtgtacgacaacaaccga
acgaaccgtgtgtgcacggactgctacacagcgctgcacggcgacagtccggtgctgcac
agccaggcgccccagaggaggcgctccatcctcgagaagcaggcctcggtggtggcagag
aacagtgtgatctgcagtttcatgcattacatggagcgagggggcaagggctggcacaag
ggctggctggtggtgcccgagaacgaacccctggtgctgtacatctacggagccccgcag
gacgtgaaggctcagcgcagtctgccattgattggcttcgaggtggggccaccagaggcc
ggtgaccggatcgagaggcgccatgccttcaagatgagccagagccacctcgtcttctac
ttcagtgcggagacggaggagctgcagcgccgctggactgaggtgctgggccgcgcaggg
cggggcgaggagtggacacatggctgcgccatcatggaggatgacgaggaagctgaaggg
agtgggtcaaccacaatcctcacaggtgctgggaacacctga
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