Pleurodeles waltl (Iberian ribbed newt): 138261278
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Entry
138261278 CDS
T10800
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
138261278 (RAI1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138261278
NCBI-ProteinID:
XP_069066169
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Position
10:153018868..153548575
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AA seq
2386 aa
AA seq
DB search
MQSFRERCGFHSNQQNFQTPSQEPARLENYRHQSQPGLNCERQRLLAKDYYNQQSFPGYE
NSAVDKYHRGNKQVPGQQLQVRPTFPAYAGVQENSAYQAQYSGEEGLQNWGSPQQALAAG
VAKYEETMMKKTAVPADGRPYQEQAAQLPFQAHPLHLPQQQQQQQQAAVAYSKLQRQKIQ
SDVSSFPQNTHFSQHSQSFPPSSTYSSVQGHSIHTYKSCSAPSTQQQERPLASANMATGQ
RVQALHGFQPNRISYEQQQSLQGRHHAQETLHYQNLSKYQHYNQQSQTYCQSDTPVRTPD
QYYQTFSPNSNHSPARSVGRSPSYSSTPSPLMPNLENFQYNQQSLNTGAFQAAITDHSHY
MPLLNPSPTDTSSPDHSTGKCKNLQKDKLADNILSDLSLQSLSALTSQVENISNTVQQLL
LSKSGMPQKKSIKNPARTPEQRKGQHCSPENNTYSMDQMGTPVSDTLGTPQSAHNEAQDT
DYLSGSEDPLERGYLFCDPSRSPARAKHNKMKPESLSTCSVTSPDNMSVKSDDSFQSINA
TLPLDTFAKYVSSDGDCPRLLMSQDELSSEIIALQDAINSEKTDKDWEMKLQTCNVRSAT
VGERYKIVEPCMKNSMKEIDAAKPSKEPSKSPFNLENNRTCMDPTTKGTWPNPEDSSALN
ETLKLNKNAVRNTCTDFGIEKFESTRADYSTAESKKTHPVGNTLAYNSNNIIPSATSSAS
YSCYSNSVANCVSNSMPSSMPTKSTETFGWLDKSINESCQRWKELEMSLNSSDPEKDLFQ
SKLIMPDKEQESACPDKQQTHKNKCGEKLNKKNEITEEEEEAMRFLNDTKADTERWLEDA
RNCSADSEFQDISLIGSPDVKVSDLEQGEYSPLCDISSPERKSMMEDAASLRSTEKAPVV
ASEESPESTIEHVATDANKNPVRTPHLTSQSVMLLGPVIGTESKVKSWFGSSLPHIEDEE
EVNTDEGADKQADTVVSDESLAQELNSQIVPESILKMNIEDLSKNRGHHSTEVLAHRLEV
SKSKEITEDQSANIHMFVNVPTQSTALGCETQSLSKLVHITTPEEKVNQETNAHAPPEHI
TYIQDPNESLSQTVTIQVPLKNVDRQVHIQIGKEHVDEKHKQTIDSIVPLKSMSQSTHTW
TSIKTPLKTTEIGTSSEKSCQTSVKNSVTTNSENMLQTTDVLTPIKSDNQLAELQTSMEN
VAQTGHTQAGVKSKQKMVNIQGPTENVDETILIPPSKIGEQTADLPSPMKNLQQTDDIQA
PIEHAHPTGNCKSPLKLMHQTIATQASVEIVHQATDIQAVTKTVPQTSSVQVLMKSVPHT
SHVQTPVDIKDKKAILQGSVESVGQTTNIQASQERFDQSETQERVRKSVQQTSYLHAPMD
DVIPKVSHSTPEGKLHHKDVLQEPMKRAAQINKLTDPTDSTDKCRKLQAAVENEHQIDSQ
QVYMESDHQLDDLHGKIESVHQIDSVQSTVETIDQTTSIHIPSESVHETDNLQAVTKSMD
QTVSSQTPTEIVDQITDIQASVECVVKMVPIQAAKESVEQMMLVPSPVESIDNSLHVQAP
SLSVIDPPVRMCTRSFTAMAEPREVEHNEGKRVKRGARGLKRKAVLQNEWQDVAPLQEAH
QTSGNDFLAVSPQQGGDSFIQKAKDNDDQHLTSRNQRSMILRSRTKVQDLFHMKRRHGKR
ATEVMLKNCKVAKRLGANRRLPSNVFKLACHGAEKMEEGSKVPKIPKSNISGKATKRALL
SLKRKSTLISPIPANKRNLMLRRNTKQQKQGPPPRLFKKSPLLQRENKLPTAALKNASVK
GPRAGLRIPSRVGRPGGQKTKVLPPRKGRGLKLESIVQKIASPHLKKLPGTAAAAASSAH
DDPLSLSPSDRALRNTSACSAAGDAGRASGGQAPAQRSPAAEQLCRNANRPLKGKPGPAK
RLFPESSEGEACSSPEAGFSMGIRSMATESPGTRSRKGRPAAGRGLAADSQPPPACRSPS
AARPPDKMERPKPEAQDSSDEEDEETEGKLSQGRGRKRASHATFNGYSKRQRKGLSAGKA
KKSKAKSRKSRAKRRRRQAQAPIVAPTEPEIRLKYLSCKPLQRGEGRVKPFAPYVQVERK
DAFSTVCTVINSLAEELTLHQVECSTLTGTASTTGAVRPALPCSSAMKLGPIVTKALPVS
CLLCCLCRNPSNHKDLGDLCGPYYPEDYLPKKKTRLKEKITKAEVLGELPLLPPSRTPRA
NESSYLASIAGKQTELDGVATDPAKQTLRSSTRGLCRKLHNCYCCDKRAEGDEPEKSRRH
QCSKAPVSSPSQDLAPEMQEHWVHEACVIWTRGVYLVGGKLYGLQEASDMAAKVVCPGCQ
QAGASITCCHKGCAQTYHFTCAIDAGCLLNEDNFSLRCLKHKRQYL
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgggaaaggtgtggtttccacagcaaccagcagaacttccagacacct
tcacaagaaccggcacgcctggagaattaccgccatcaaagccagcccggcctaaactgc
gagcgccagaggctgctggctaaagactactacaatcagcagtctttccccgggtacgag
aacagcgccgtcgacaaataccaccggggaaacaagcaagtacccggccagcagctgcaa
gtgaggcccaccttccccgcctatgccggcgtgcaggaaaacagcgcctaccaggcccag
tattccggggaggaggggctccagaactggggctcgccgcagcaggccttggccgcaggg
gttgccaagtacgaggagactatgatgaaaaagactgccgtgcctgctgatgggagaccg
tatcaagagcaggcggcccagttgccttttcaagcgcaccctctgcacctcccccagcag
cagcagcaacaacaacaggctgcagtcgcctactccaagctccagcggcagaaaatccaa
agcgatgtctcgtcctttccccaaaatacccacttctcacagcattctcagtccttcccg
ccatcttcaacatactcttcggttcagggccactcgatccacacatacaaaagctgctct
gccccctccacccagcagcaagaaaggcccctggcaagtgccaacatggccactggtcag
agggtgcaggctcttcatggctttcaaccaaataggatcagctatgaacagcaacagtct
ttgcaaggtagacaccatgcccaggagactctgcattaccaaaacctatccaaataccaa
cattataaccagcagagtcaaacatattgccagtctgacaccccggtgagaacaccggac
cagtactaccaaacgttcagcccaaattcaaaccattctccagctcgctccgtaggaaga
tctccatcctacagctcaacaccctcgccacttatgcctaaccttgaaaatttccagtat
aatcaacagtctctcaacactggggctttccaggcagcaataacagatcacagccattac
atgcccctgttgaatccttcccctacggacacatcgagcccagatcattcaactgggaaa
tgcaagaatttacaaaaggataaattagccgacaatattctctctgatctcagtctgcag
agtctgagcgcgttaacctcacaagtggaaaacatctccaacactgtgcagcaacttctc
ctttccaaatcagggatgccgcagaagaagagcataaaaaatcctgcccgaacgccggag
cagcgaaaagggcagcactgcagtcctgaaaacaacacgtactccatggaccagatgggg
acaccagtgtcggacacacttggcaccccacagtccgcacacaatgaagcacaggatact
gattatctgagtggctctgaagatccactagagagaggttatttgttttgcgacccaagt
aggagcccagcaagggccaagcacaacaagatgaaacctgaatccctttctacatgctct
gtgacgtccccagacaacatgtcagttaaatcagatgactccttccagagcatcaatgcc
acgttgcccttagacacatttgccaaatatgtgagcagtgatggggactgcccacgactg
ctgatgtctcaggacgaattatcctcagaaatcatagcccttcaagatgcaatcaatagt
gagaagacagacaaggactgggagatgaagttacagacctgcaatgttagatctgccact
gttggcgaacgttataaaattgttgagccctgtatgaagaatagcatgaaagagattgat
gcagcaaaaccaagcaaggaaccctccaaatcccctttcaatttagaaaataacagaacc
tgcatggacccaacaacaaagggtacctggcccaatccagaggacagcagtgcactcaat
gagacattaaaattaaacaaaaatgcagtcagaaacacctgcacagattttggaattgaa
aagtttgagagcacacgagcagattactcgacagcagaatccaagaagactcacccagta
ggaaacactttggcttataactcgaataacatcatcccaagtgctacctccagtgccagt
tacagctgctattcaaactctgtggccaactgtgtttcaaactccatgcccagttctatg
cccaccaaaagcacagagacctttggctggctggataaaagcatcaacgagtcctgtcaa
aggtggaaagagctggagatgagcttgaactcgtctgacccagagaaagacctatttcaa
agcaagttgatcatgcctgacaaggaacaggagagtgcctgccctgataaacagcaaacc
cataaaaataagtgtggcgagaaattgaacaagaaaaatgaaattacagaggaagaagag
gaagcaatgcgtttcttgaatgacactaaggcagacactgaaaggtggcttgaagatgct
aggaactgttcagctgattctgagtttcaagatatttcattgataggctcgccagatgtg
aaagtatccgatctagagcagggggagtattcacctctgtgtgatatctcaagcccagaa
agaaaatccatgatggaggatgctgcttctttgagatctacagaaaaagcaccggttgtt
gcctcagaggaatctcctgagtccacaatagagcatgtcgccacagatgcaaataaaaat
ccagtacgcactccccatttgaccagccaatctgttatgcttttgggacctgtcattggc
acggaatccaaggtgaaaagttggtttggatcttctctgccccatatagaagatgaggaa
gaggtcaatactgatgaaggggctgacaaacaagcagacactgtagtatctgatgaatct
ctagctcaggagttaaatagccaaatcgtacctgaaagcatcttaaagatgaacatagaa
gatctttccaaaaacagaggccaccatagcacagaggtcctcgcccatagactagaggta
agcaaatccaaagaaataacagaagaccagtctgcaaatatccacatgtttgttaatgta
cctacccagagcacagcccttggttgtgagacacaaagtttaagtaaactggtgcacatt
acaactccagaggaaaaagttaatcaagagacaaatgcccatgctccaccagaacatatc
acatacattcaggatccaaacgaaagcttgtctcaaactgtgacgatccaggttccactg
aaaaatgtggatcgacaggttcacattcaaattggaaaagaacatgtggatgaaaagcat
aagcaaaccatagactccattgttcccttaaaaagtatgtctcaatccacacatacatgg
acatcaatcaaaactccactcaaaaccacagaaattgggacttcatcggaaaaatcgtgt
caaacttcagttaaaaactcagttacaacaaacagcgaaaatatgcttcaaactacggac
gtactgactccaataaaaagtgataatcaacttgcagaactacagacttcaatggaaaac
gtagctcaaaccggacacacccaggctggagttaaaagcaagcagaaaatggtaaatatc
caagggccaactgaaaatgtggatgaaacaatacttatacctccatcaaaaattggggaa
cagacagcagacctcccgtctccaatgaaaaacttacaacaaactgatgacatccaagct
ccaattgaacatgcacatccaactggcaattgcaagagtccactgaaactcatgcatcaa
accatagctacccaagcttcagtggaaattgtgcatcaagccacagatattcaagctgta
acaaaaacagtgcctcaaacttcaagcgtccaggttttgatgaaaagtgtgccgcacacc
tcacatgtccagacaccagtagacattaaagataaaaaagcaatcctccagggttcagtg
gaaagtgtgggtcaaaccacaaatatccaagcttcacaggaaagatttgatcagtctgaa
acccaagagagagtaaggaaaagtgtacaacaaacttcctatctgcatgcaccaatggat
gatgtaattccaaaggttagccattcaacaccagagggaaaactgcatcacaaagacgtg
ctacaagaaccaatgaaaagggcagcacaaatcaacaagctgacagatccaacagacagt
actgataaatgtagaaaattgcaggctgcagtggaaaatgagcatcaaattgacagccag
caagtttatatggaaagtgatcatcaacttgacgacttgcatggaaaaatagaaagtgtg
catcaaattgacagcgtgcaaagtacagtagaaactatagatcaaaccacaagcatccac
attccatcagaaagtgtacatgaaacagacaaccttcaggcagtaacaaaaagtatggat
caaacagtttccagccaaactcctacagaaattgtggatcaaatcacagatattcaggcc
tcagtggagtgtgtggtcaaaatggttcccatccaggctgcaaaagaaagtgtggaacaa
atgatgcttgttccatctccagtggaaagcatagacaatagcctacatgtccaagctcct
tcgctttctgtcattgatcctccagtcaggatgtgcacccgttcattcacagccatggct
gaaccccgcgaagttgaacataatgagggaaagcgagtaaagagaggagcacgtggcctg
aaaagaaaagctgttctccagaatgaatggcaggatgtggcacctcttcaggaggcacac
caaacatctggcaatgacttcttggctgtaagtccacagcaaggcggagactcttttatc
cagaaggccaaagataacgacgaccaacacttgacatccagaaaccagagatctatgatc
ttgaggtccagaaccaaggtccaggacctcttccacatgaaaaggcgccatgggaaaagg
gcgacagaagtcatgctcaaaaactgcaaagtcgctaaaaggttaggtgcaaacaggagg
ctcccctccaacgtcttcaagcttgcatgtcatggtgcagagaaaatggaagagggcagc
aaagtcccgaaaataccaaagtccaacattagtggcaaggccaccaaacgggctctcctt
tccttgaaaagaaaatccaccctgatttcccccatcccggcaaataaaagaaacctgatg
ctgaggaggaacacaaagcaacaaaagcaaggaccccctccccgtctttttaaaaaaagt
ccactattgcaaagggagaacaagctgcctacagctgcactgaaaaatgcatcagtcaaa
ggccccagagcaggcctcaggatcccctccagggtaggccgccctggcggccagaagact
aaagtgctacccccgaggaaaggcagaggactgaagctggagtccattgttcagaaaatc
gcttccccccacttgaagaaactcccaggcacggctgcagctgcggcctcttccgcccac
gacgacccgctcagcctttccccctccgacagggccttgagaaacacaagtgcgtgctcg
gcggcgggagacgccggcagggcctccggcgggcaggccccggcgcagcgctctccggca
gccgagcaattatgcagaaacgcgaacaggcccctgaaagggaagccggggcctgctaag
agactgttcccggagagcagcgagggcgaggcctgctcgtcgcccgaggccgggtttagc
atggggatccgcagcatggcaacggaaagccccggcactaggagcaggaagggaaggccg
gccgcgggccggggcctagccgcggacagccagcccccgccggcctgccgttcgccatct
gcagccaggcccccggacaagatggaaaggccgaagccggaggcgcaggacagcagcgac
gaggaggatgaagagacggagggcaagctctcgcagggcagggggaggaagagggcaagc
cacgccacctttaatgggtactccaagagacagcggaagggcctgtccgcgggcaaagcc
aaaaagagtaaggctaagagccgaaaaagcagggccaagaggaggaggaggcaggcacag
gccccaatagttgctcccactgaacctgagatcaggctgaagtacttgtcatgcaagccc
ctgcagaggggagagggtagggtcaagccctttgctccttatgtgcaggtagaaaggaaa
gatgcattttccacagtctgcacggtcatcaactccctggctgaggaattgacgctccac
caggtggagtgctccacactgacgggcacggctagcaccacaggtgcagtcagacctgcc
ctgccatgttcttcggccatgaagctgggccctatagtcactaaggccctgcccgtcagc
tgccttttatgttgtttgtgccgaaatccctccaatcacaaggacctgggggacctgtgt
gggccttactaccccgaggactacttgcccaagaagaagacgaggctgaaggagaaaatt
acgaaagcggaggtgctaggcgagctgcccttgctgcctcccagtaggacaccgagggcc
aacgaaagcagctatcttgccagcatagctggcaagcagactgagttggacggtgtagct
actgacccagccaagcaaacactgcgttccagtacgcgggggctgtgccggaagctgcat
aactgctactgctgtgacaagcgggcagaaggagacgagcctgagaagtcccggcggcac
cagtgcagcaaggcccctgtgtcatccccatcacaggacttggctcccgagatgcaggag
cattgggttcacgaggcctgtgtcatatggaccagaggggtttacctggtgggaggaaag
ctgtacggactgcaggaggcatcagacatggcagccaaagtggtatgtccagggtgccag
caagcgggagcgtctatcacctgttgccacaaaggctgtgcgcagacatatcacttcaca
tgtgccattgacgcaggttgtttattaaatgaagacaacttttccttgaggtgtctgaaa
cataagcgtcagtacttgtaa
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integrated database retrieval system
