Pleurodeles waltl (Iberian ribbed newt): 138261303
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Entry
138261303 CDS
T10800
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04010
MAPK signaling pathway
pwl04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138261303 (CACNA1H)
04020 Calcium signaling pathway
138261303 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138261303 (CACNA1H)
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
138261303 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
TMEM208_SND2
DUF4834
Motif
Other DBs
NCBI-GeneID:
138261303
NCBI-ProteinID:
XP_069066228
LinkDB
All DBs
Position
10:complement(167205634..167936695)
Genome browser
AA seq
2356 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVKCESERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDQNFVLNYNISSLRPYYQLDETED
NPFICSTVRDNGMLRCHDVPPKKESGLECSLSVDLENHNWYHMDVGTRNSCINWNQYYNT
CKTGEVNPHKGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICH
IFRKVKRRTVRLYSNWQNKRRKKVNPNSAANGQGRSRRSRRRITSIHHLIHHHHHHHHHH
YHISNGSPRGQRPSPEICDLEMKVLKPRSQLMLPPPSPGLQSSAPSSESVHSIYHADCHV
EGAPVKCKSSSASPNIKLTAGLINHTNMNYPTIMPSPGSKISPVPGPRGRRSNSTPVTLI
NSPMSLSTDPYGKHSYLIGEHGLCRTSSRHSSMSVPCPMPSAQPSPLSCELQSCPYCASI
LENPEFEFSESESGDSDTNGVYEFTQDLRHGDIRDQLQQQQQRRQKRRNRKKKPKEGNKV
TKLMTAFSNRLQRIVDSKYFNRGIMIAILINTLSMGIEYHEQPEELTNSLEISNIVFTSM
FALEMVLKLLAFGMFGYIKNPYNIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLV
RFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTETGDTIPDRK
NFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILV
EGFQAEGDATRSEAEEDKASGNFDEDLEKFKDLRAAEMKMCSLTVTPNGHLDPRMDSRVS
MPPPIIMRTAATPMPTPKSSPYMDSVHTYVDSRRESNASLDPSICDQKSLSSLRSSPCPP
WGTYSNWGSRRSSWNSLGRAPSIKRKSQSGERESLLSGEGKGSTDDDSDDCKSNTRSRIS
MLRRAESLDTRASMEMPELLQVPTLRHSLSIGPMAAILPSEYPDCNGKIVHVPSDLFMRI
DNHKEEPLDYDDDMDDSFCYRVQKILEPYKPEWCKTHEDWSLYLFSPQNRFRAMCQKVIT
HKMFDHVVLVFIFLNCITIAMERPDIHVNSTERIFLSVSNYIFTAIFVAEMTVKVVALGF
FSGENAYLQSSWNVLDGVLVFVSIIDIIVSLASAGGNKILGILRVLRLLRTLRPLRVISR
APGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGLDTKNITNRSD
CIQARYKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVAIDVQPVRNNNPWML
LYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRQRRLEKKRRSKAMYM
SEAQRRPYYADYSPVRRYIHTLCTSHYLDLFITFIIGINVITMSMEHYNQPESLEEALKY
CNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEINASLPINP
TIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELF
GKLVCNDENPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECTLDDKHCLTY
LPFISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAREDAEMDAEIEMEMERSRGVT
SPSSAGVCTPIPDSKATFGSQETLKSEFPASTKLGMGEGAYMRDAKGSQNLLTVRKISVS
RMHSLPNDSYMFRPVMPAKAPYPLHEVETYEEASPTGSVASVHSQTGETGSTLCVPLERL
PRAAVSCHHEPPDLPKIPAPLPVSRSPSLNRLLQRQEAIRSDSIDHQACESKDGLQADSS
DSLHLKIPSPNTLAPPLICTPALSPSGTPQSSPMLSSHSRRSSVRTRKNVYSQHSIPSRS
SSRNRERIDHEDSLFESSDLADEEVRNINSSAEDWIGQSETRSHSVSPFIGSSSRPAVPL
KSCNSTTNLTGSESKEKDLKKFYSIDTHGFLAKPTWTDDQRRHSIEICPSIDDGDSCFEQ
SIDGKDSPPIHMHSDPEYLHGVRRKKKMSPPCISIEPPMEDDNGTAARTKVSESNMMLRR
RTPSCESAPYRDSLDLGDNQPGEQPSKTDRRGQLPCRGEHLTLPSYSFDQADTNPRSSLP
NLFCDNGQSIPSSVDSVDIRPDTVELEIKVDHLKTHCENLEQNKETIGIRIPKSPMRRHV
LVRMANTTDDDVDKPV
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatccttctgaactgtgtgactcttgggatgtttcagccttgtgaagatgtg
aagtgtgagtcagagcggtgcaccatactggaggcattcgacgacttcatctttgccttc
tttgctgtggagatggtgatcaaaatggtcgctctagggatctttggacagaagtgttat
cttggagacacgtggaaccgtctggattttttcatcgtgatggcagggatgatggaatat
tctctagatggacacaatgtgagcctgtctgcaatccggactgtccgagtactcaggccc
ctaagagccattaacagggttccaagtatgagaatactggtgaccctgctcttagacact
ctgcctatgttaggcaacgtcctcctcctctgtttctttgtctttttcatcttcgggatt
gttggtgtgcagctctgggcggggcttctgcggaacaggtgttttctcgaccagaatttt
gtgctaaactacaacatctcctctctgcgaccttattatcaattagatgaaactgaagac
aatcccttcatctgctctaccgtccgggacaatggcatgttgaggtgccacgatgtccct
ccgaagaaagaatctgggttggaatgctcactaagcgtggacttggaaaaccacaactgg
taccacatggatgttggcaccaggaacagctgtataaactggaaccaatattataacact
tgcaagacaggggaggtcaatccgcacaaaggagctattaattttgataacataggttac
gcctggattgcaatttttcaggttataaccctggaaggttgggttgacatcatgtactat
gttatggatgcccactctttttacaattttatatattttatattacttataatcgttggt
tctttcttcatgattaacttgtgcctggttgtgatagcaacacaattttcggagaccaag
cagcgggagaaccagctgatgcaggagcaacgggcccgctacctgtccaatgacagcaca
attgctagcttctcagagccaggcagctgctatgaggaattgctcaagtacatctgccac
atcttcaggaaagtgaagcgaaggacagtccgcttgtacagcaactggcagaacaagagg
cggaaaaaggtgaacccaaacagtgctgcaaatgggcaaggtcgcagccgcaggagcagg
cgaaggatcacctccatccatcacttgattcaccaccatcatcaccaccaccatcaccac
taccacattagcaatggaagccctcggggccaaagaccaagccctgagatctgtgatctg
gagatgaaggtcttaaagcctcggagtcagctcatgctgccgcccccatccccagggctg
caaagttcagctccaagctcagagtcagttcatagtatttatcatgcagactgccatgta
gaaggagccccagtgaaatgtaagtcttccagtgcctcaccaaacatcaaactgactgct
gggctcatcaaccacaccaacatgaactatccaaccatcatgccttctccaggcagcaaa
atcagtcctgttccaggacctcgggggaggagaagcaatagtacccctgtaacactgatc
aacagccctatgagcttgagtactgatccctacggaaagcacagttacttgataggagaa
catggcctctgtaggacatccagcaggcactccagcatgagtgtgccctgccccatgccc
agtgcccagccaagcccactgtcatgtgaactgcagagttgcccctactgtgcaagtatc
ctggagaaccccgagtttgagttcagtgaatcagagagtggtgactccgataccaacggt
gtctacgagttcacgcaggacctacggcacggggatataagggatcaactgcagcagcag
cagcaacggcggcagaagaggagaaacaggaaaaagaagccaaaggagggaaataaagtc
acaaaactaatgaccgccttcagcaataggctgcagaggatcgtcgacagcaaatacttc
aaccgtggaattatgattgccatcttgatcaacactttgagcatggggattgaataccat
gagcagccagaagagctgacaaactccctggagatcagcaacattgtcttcacgagcatg
ttcgccctggagatggttctcaagcttttggcctttggcatgttcggctacatcaagaat
ccttataatatcttcgatgggatcatcgtcatcatcagtgtttgggagatcattgggcag
tcagacggaggcctctctgtgttgagaacttttcgactacttcgagttttgaagctagtg
aggttcatgcctgctctacggagacagctagtggtcctgatgaagacaatggacaatgtg
gccaccttctgcatgctgcttatgcttttcatcttcatcttcagcatactgggaatgcat
ctttttggctgtaagtttagcttgaagactgaaactggggacactattccggacagaaag
aactttgattctttgctgtgggccattgtcacagtcttccagattctcactcaagaagac
tggaacgtggtcctctacaacggaatggcttccacctcctcctgggctgcactctacttt
gtggcactcatgacctttggcaactatgtactttttaacctcctagtagccatcctggta
gaaggcttccaggcagagggtgatgccaccagatctgaggcagaggaagacaaggcatcc
ggtaactttgatgaagatttggaaaagttcaaggacttgcgcgcagcagagatgaagatg
tgctccctcactgtgaccccaaatggacacctggaccctcgaatggattctcgtgtaagc
atgccacctccgatcatcatgcgcactgcagcaacaccaatgcccacaccaaagagttcc
ccctacatggattcagtgcacacatacgtagactccagacgagaaagcaacgcttccctt
gacccgtccatctgtgatcagaagtccttgtcaagcctccgtagctctccatgtccgccc
tggggcacatacagtaactgggggagtcggcgctcaagttggaacagcctaggcagagct
ccaagcatcaagaggaagagccagtcaggggagagagagtcgcttctgtctggtgaagga
aaaggaagcaccgatgatgattctgatgattgtaagtcaaacacgagaagccggatttcc
atgctccggcgggcagagtcgcttgacacccgagcatccatggaaatgcctgagcttctc
caagtgcccacattgcgccactccctcagcattggaccaatggcagccattttgccatca
gaatacccagactgcaatggcaaaatagtgcacgtgcccagcgatctattcatgcgcatc
gacaaccacaaagaggagccactggactacgatgatgacatggatgatagtttctgttat
agggttcagaaaattctggagccgtacaagccagaatggtgcaagactcacgaagactgg
tcactctacttgttttcccctcagaaccggtttcgtgctatgtgtcaaaaggttatcacc
cacaaaatgtttgaccatgtggtcctggtcttcatcttcttaaactgcatcaccattgcc
atggagagacctgatattcatgttaacagcacagaacgcatctttctcagtgtctcgaac
tacattttcactgcgattttcgttgccgagatgacggtcaaggtggtggccctgggattc
ttctctggtgagaacgcttaccttcaaagcagttggaatgtcctggatggtgtcctggtc
tttgtttcgatcatcgacatcattgtctccttggcttctgctggagggaacaagattctg
ggaatccttcgagtgctgagattgctgcggactctgcgccctttacgtgtcatcagccga
gctcctggcctcaagctggtggtggagaccttgatatcatctctaagacccattgggaac
attgtccttatctgttgtgcttttttcattatctttgggattcttggagtacagctgttt
aagggtaaattttactactgcgaagggctggacaccaaaaacatcaccaacagatcagat
tgcatccaagcacgatacaagtgggtccggcgaaagtacaattttgacaacttgggtcag
gcactgatgtcattgtttgttctgtcctccaaggatggctgggtaaacatcatgtatgat
ggcctagatgcagtagccattgatgttcagccagtgcggaacaacaacccttggatgctc
ctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtaggg
gtggtggtagagaacttccataagtgccgacagcaccaagaggccgaggaggcccggcgc
cgggaggagaaacgccagcgccgtctggagaaaaagcgcaggagtaaggcgatgtacatg
tctgaggcacagcgaaggccgtactatgccgactactcccccgtccggaggtatatccat
acgctctgcacaagccactacttggacctgttcatcacattcatcatcggcatcaatgtc
attacaatgtccatggagcactacaaccaacctgagtccctggaagaagccctgaagtac
tgcaattatgttttcaccatcgtgttcgtctttgaggctgtcctgaagctggtggcattt
ggattcagaagattctttaaagacagatggaaccaactggatctagccatagtgctacta
tccatcatgggaatcacattggaggaaatcgaaatcaatgcttcactcccgattaacccg
actattatccgcatcatgagagttctgaggattgctcgagttctcaaactcttgaaaatg
gcaactggcatgcgtgctttgctggacactgtggtacaggctttgccccaggtaggaaac
cttggcctactttttatgctgctgttttttatctatgctgccctgggagtggagttgttt
gggaaactagtgtgcaacgatgagaacccctgtgaaggtctgagccgacacgcaactttt
gaaaactttgggatggcctttctcacactcttcagggtctctacaggtgacaactggaat
ggaatcatgaaggatactctgcgtgaatgcacccttgatgacaagcactgcctcacctac
ctgcccttcatctccccggtctactttgtcacttttgtcctgattgcccaatttgtcctc
gtcaatgttgtggtggcggtactcatgaaacaccttgaggagagtaacaaggaagccagg
gaggatgcagaaatggatgctgagattgagatggaaatggaaaggtcccgtggtgtcacc
tctcccagtagtgctggggtctgcacgcccatacccgacagtaaagccacgtttggaagt
caggagaccctaaagtctgagtttccggcctcgacgaagctaggaatgggtgaaggagcc
tatatgagggatgctaaggggtcacagaacctgctgacagtgcgcaagatctcagtctct
aggatgcactcactgcctaacgacagctatatgttccgtcctgtgatgccggctaaagct
ccctaccccctacacgaggtggaaacgtacgaggaagcttcacccacaggctcggtggcc
tccgttcattcccagaccggtgaaacagggtcaacgctttgtgtcccattggagcgccta
cctcgagccgccgtgtcatgccaccatgaacctcctgacctgcccaagatcccagccccg
ctacccgtctccaggtcccctagcctcaacaggctcctccaaagacaggaggccattcga
tcagactcaattgatcaccaagcctgtgagtccaaggacgggctccaggccgattccagt
gacagccttcatttgaaaatcccatcgcccaatacactggctcctcctttaatctgcaca
cctgctctttccccatcgggcacccctcagtcttctcccatgctctcctctcacagtaga
cgatcaagcgtccgcacccgcaagaatgtgtatagccagcacagtattcccagtagatct
tccagcagaaaccgtgagcgcatagaccatgaagactcgctgttcgaatcatctgacctg
gctgatgaggaggtgcgaaacattaacagttcagcagaagactggatagggcagtccgaa
acgagaagtcactctgtgtctcctttcatcggttcaagttcacgtcctgcggttcccctg
aagagttgcaacagcacaactaacctgactggcagtgaaagcaaagagaaagacttgaag
aagttttacagtattgatactcatgggttcttggcaaaacctacatggacagatgaccaa
agaaggcactcaattgagatctgtccatccattgatgatggagattcctgctttgaacag
tccatagatgggaaggactctcctcctatccacatgcattcagatcctgagtatctccat
ggtgttcggaggaagaagaagatgagccccccttgcatttcaatagagcctcccatggag
gacgacaatggcacggctgcccgtaccaaagtctcggagagcaacatgatgttgcggagg
aggactccatcttgtgagtctgccccctacagggactccttggaccttggagataatcag
cctggggagcaaccttctaaaacagaccggcgggggcagctgccatgccggggggaacat
ttgacattgcctagttactcctttgaccaggcggacacaaatcctcgaagcagtctccca
aatttgttttgtgacaatggccagtcgataccctcttctgtggactctgtagatatcagg
ccggacactgtggaattagaaataaaagtagaccacctaaaaactcactgcgagaacctt
gagcagaataaagagacaataggcattcgaattcctaagagcccgatgagacggcatgta
ctagtccgaatggctaacactacagatgatgatgttgacaaaccagtatag
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integrated database retrieval system
