Pleurodeles waltl (Iberian ribbed newt): 138261319
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Entry
138261319 CDS
T10800
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03430
Mismatch repair
pwl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138261319 (PMS2)
03460 Fanconi anemia pathway
138261319 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138261319 (PMS2)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
138261319 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
138261319
NCBI-ProteinID:
XP_069066255
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Position
10:complement(180577399..180698916)
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AA seq
867 aa
AA seq
DB search
MEEPSTVLAKPIKPIDRKSVHQICSGQVVLNVGTAVKELVENSLDAGATSIDIKLKEYGA
ELIEVSDNGCGLEEENFEGLTLKHYTSKLQDFSDLAHVETFGFRGEALSSLCALSDLVVC
TCHKSAQIGTRLVFDHNGKIVQKVPYPRQQGTTVSVQQLFYTLPVRYREFLRNIKKEYAR
MVQILQAYCIISNGVRINCTNQVGQGKRNPVVCSSGNSSGMKENIGAVFGQKQLQSLIPF
VQLPPSEGVCEEYGLNHAALPHNLYTITGFISRCDHGVGRSATDRQFFFINQRPCDPAKV
SKLINEVYHMYNRHQYPFIVLNICVNSECVDINVTPDKRQILLQEEKLLLAILKTSLLGI
LSGDVNKLNINQKLMDVGGNFRKLLPEVPDTHDSEFGIPTSMQNPSRDEKTAMSLSRLRE
AFSLHQGKESSPQSNKSKKPGHDSPGQRTLQSFFGTSNSVSHQNSTSVNSNEVCTKTADC
NPGAFSIHKLKAKDDYNSGHESAHAECDPSFSTPDVCSRFSSESDAGSPQEGTSSAKDDD
LSSALDTVKHHDSSSESSVANGTLDMPTVRAKYDGSFSISAKRSKIDQVEPFPVLVQELR
NSSTSMAEAQTDVPVDIVRKTVPLRFSLNALADRVKRLQEQKQASDSLRYRRFRAKINPS
TNQEAEDELRKEISKDMFAKMEIIGQFNLGFIITKLNSDLFIIDQHATDEKYNFEMLQQK
TVLQGQRLIAPQTLNLTAVNETVLIENIEIFRKNGFDFLLNDSAPVTERVKLISLPTSSN
WTFGPKDIEELIFMLSDCPGVMCRPSRVREMFASRACRKSVMIGTALNASEMKNLVTHMG
EIEHPWNCPHGRPTMRHIANLDMIAQE
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacccagtacagtgcttgcaaagcctattaaacctattgatcgtaaatcagtc
catcaaatctgctccggccaagttgtactgaatgtgggtactgcagtgaaagaactggtg
gagaacagtttagatgctggcgccactagtattgacataaagcttaaagaatatggtgct
gagctaatcgaggtttccgataatggctgcgggttagaagaagaaaattttgaaggccta
accctcaagcactatacttccaagttacaagatttttcagatctagcacatgtggaaaca
tttgggtttcgaggcgaagcactaagctcattgtgtgccttaagtgaccttgtagtctgc
acatgccacaaatctgcacagattggtacacgtttggttttcgatcacaatggcaaaatt
gttcagaaggtgccttaccctcgccagcaaggcaccactgtcagcgtgcagcaactgttt
tatactctgccagtgcgctatcgagaattcttgcgaaatattaaaaaggagtatgccaga
atggttcaaatcttgcaagcctactgcattatttcaaacggtgttcggataaactgtacg
aaccaagttggacaagggaagagaaatcctgtggtgtgttccagtggaaattctagtgga
atgaaggaaaacattggagctgtattcggacaaaaacagttgcagagcttgattcccttt
gtccagctgcctcccagcgaaggggtttgtgaagagtatggtctgaatcacgctgctctc
ccacacaacctctacaccatcacaggatttatttcccgctgtgaccatggagttggacgg
agtgcaacagacaggcagtttttcttcatcaatcaacgcccatgtgacccagcaaaggtt
tccaagctgattaatgaagtttaccacatgtacaacagacatcaatatccatttattgta
cttaacatctgtgttaattcagagtgcgttgacataaacgtcaccccagacaagcggcag
attttactgcaggaggagaagctcttgctggccatattaaagacgtccttgttaggaata
ttaagtggtgatgtgaacaaactgaatatcaaccagaagctgatggatgttggaggtaac
ttcagaaaattactccctgaagtccctgatacccatgattcagaatttggcatccctact
tcaatgcaaaatccaagtcgcgatgaaaagacagcaatgagtttatccaggttaagggag
gcattttcccttcatcaagggaaagagagtagcccccaaagtaacaaaagtaagaaaccg
ggccacgactctcctggtcaaagaacgcttcagtccttctttggtacttcgaactcggta
agccatcagaacagcacttccgttaatagcaatgaagtatgcaccaagacagcagactgt
aaccctggtgcctttagtatacacaaactaaaggcgaaagatgactataactctggacat
gaaagcgcgcatgcagagtgtgaccccagcttcagcactccagatgtttgtagtcgcttc
agcagtgaaagtgacgcaggctctccacaggaaggcacatcctctgccaaagacgatgat
ttaagcagcgctttggacactgttaagcaccatgacagttcttctgaatctagtgttgca
aacggtacattggatatgccaactgtgagagcaaagtatgatggttctttcagtataagt
gccaagcgttctaaaatagaccaggttgagccctttcctgtgctcgtgcaagaattgaga
aattcatccacaagtatggcagaggcgcaaactgatgtgcctgtggatattgtaagaaag
acagtcccacttaggttctcgctgaacgctctcgcagacagggtgaaaaggctccaggag
cagaagcaagcatcagattcactgaggtaccgaagattccgagccaagatcaacccctct
acaaaccaagaagcagaagatgaattaagaaaagaaatcagtaaagacatgtttgcaaaa
atggaaatcatcggccaatttaatttgggatttatcataaccaagctgaactcggacctc
ttcataattgatcagcatgctacagatgagaaatataactttgaaatgttacaacaaaag
actgttctccaaggacagaggttgatcgcgccacagactctgaatttaactgctgtgaat
gaaaccgtcttaattgaaaacatcgaaatatttaggaaaaatggatttgatttcctttta
aatgacagtgcacccgtcacagaaagagtcaagttaatttctttgccaaccagcagcaac
tggacatttggtccaaaagatattgaagaacttatcttcatgttgagtgattgccctggt
gtcatgtgtaggccatcgagggtcagagaaatgtttgcctcaagagcttgtcggaaatct
gtgatgattggaacagcactgaatgcctctgagatgaagaacttggtgactcatatgggt
gagattgaacatccatggaactgcccccatggtcggccgacgatgagacatattgctaat
ttagacatgatagcacaagaataa
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