Pleurodeles waltl (Iberian ribbed newt): 138261329
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Entry
138261329 CDS
T10800
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pwl01001
]
138261329 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pwl04054
]
138261329 (CIITA)
Enzymes [BR:
pwl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138261329 (CIITA)
Protein kinases [BR:
pwl01001
]
Serine/threonine kinases: Other
TAF1 family
138261329 (CIITA)
Pattern recognition receptors [BR:
pwl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138261329 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
NPHP3_N
LRR_14
LRR_9
LRR_8
AAA_16
nSTAND3
NB-ARC
RsgA_GTPase
AAA
AAA_22
DUF815
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
138261329
NCBI-ProteinID:
XP_069066270
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All DBs
Position
10:complement(186638761..186887830)
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AA seq
1123 aa
AA seq
DB search
MLLTGSSKPAMEMPLFANTSNKGLVRNGVNPDCFLEEGTFPAGEIMDSDQFGNIDFLTEY
RFEDIAEIAEFILDDKDGTIKTFLELDDPVVGSSIQKRNFSVTTGTQTDEPNCKRKKQGP
SARKNVGKRQRLCRKKVIQQDRVPAPTAVHGIFTLTPCSSNVSASISSFVPHAQVPSPMT
SSGGLEVPAAISGAEGAPLGSGWFQITQTIAALPQDFISIQPGSHVSNIIICPAPAPAWP
PQIAVPLMSAFTPGNAALGSIPTSPDRSASCSPFVPTNADMPSMPQAASISHCTETDCEM
CIEQLVTPNITSTETPKKPKYVEAFQSLLKERWKDTTPEPKGTQKDIYTDITLLQNCVQN
KSCNNTAKGVEKLTIYDVTAKEKSLLERSNLFQVTREKPRETKTVVLLGQAGMGKSVLVK
KICQDWSAGGYSEFVFVFCFEYCQFSLTGQQYSLKDLLFELSAKPEEKCDEVFKYILRNP
HEVLLIFDGFDKVQDFDGLTHCPVDFSFKQSYTMKDLFAGIFLKKLLQGCTVLITAQLKE
KFNQHLAKADKVVEIIGFSPKHIDEYMEKHFENVPYGTDCMKQIKECQYLFSYCYIPLMC
RLICVVSEAVFKERDRKMPSTLTSLFANLIIYNLVAAEPHSNTNLAVDNECFAKLTSLAL
TLGEKHQNGLMHSYFPSIDKRDFALKNGFMKTFPVQSDPLSKERSVFSDGTLENFFVALK
LVLSHTVKGKSLLRYISFKPRKKKLQDQFLCIVPRFLTGLLFFEEHLNLGFTSEKKTKNS
VHEKRNAVLQYLKTLLENELSANTLLELCHCVYESQDKDLLGLTASKLEGNISFQRMHLT
PPDVHVLQHVLRRSSNLMSLDLTNTGIQLQDLKELVNLNSVSMFRASLGDTVRLWELLHQ
SGEFEPIRLTIKKFVIEPFKAKSMKDVEDISALVQFQAQIINCIHEIPTIKTLKKIEFAL
GPVWGSEGFFKLVKILPAFSSLLHLDLNALSGNNIGDKGAEKLSEIFRELTKLETLDLSQ
NRITDLGVEKLAQALPSLTCLQKLSLYNNQIGDYGAEKIGDILPLLTSLTVLALQYNRIT
DTGAQKLTESLRKCPNIKRLTMWNSTIPHGVLERLQKQDPRIS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgacaggtagcagcaaaccagccatggaaatgccactctttgcaaacacttcc
aataagggtttagtgcgcaatggtgttaatccagactgttttctggaagagggcacattt
ccagcaggcgaaatcatggattctgatcagtttggaaatattgattttctgacggagtac
cgctttgaagatatagctgaaatagcagaatttatcctggatgataaagatggaacaatt
aagacatttttagaattagatgacccagtcgttggcagcagcattcagaaaagaaatttt
tctgtcactacgggtacccaaactgatgaaccaaactgtaagcgcaagaaacaaggacca
agtgctcgaaagaatgttggaaaaaggcaaagactctgcagaaagaaagttatacaacaa
gatcgtgttcctgcacccacagcagtgcatggcatattcacgttaacaccatgttcttct
aatgtctccgcttcaatttcgagctttgtgcctcatgcacaagtgccgtcgcctatgaca
agcagtggtggactggaagtacctgctgctatctcgggtgcagaaggtgcacctttggga
tctgggtggttccagatcacgcagaccatcgcagcccttccacaggattttatcagcatt
caacccggaagccacgtgtcaaacattattatatgcccagccccagcaccagcctggccc
ccacagattgcagtacctctcatgtctgcttttacaccagggaacgcagccctgggaagt
attcccacatctcctgacagaagtgcatcatgcagcccctttgttccaacaaatgctgat
atgccatctatgccgcaggcagcttctattagccactgcactgaaaccgattgtgaaatg
tgcatcgaacagttagtcactccaaatattacttctacagaaactcctaaaaaaccaaaa
tatgtggaagcttttcaatctttactgaaggagcgttggaaggacacgacaccagaacca
aaagggactcaaaaagacatctatacagacatcactctgcttcaaaactgtgttcaaaat
aaatcttgcaacaatactgccaaaggagtggaaaaacttactatctatgatgtcacagca
aaggaaaaatcattgttggaaagaagcaacttgtttcaagtcactagagagaaaccaaga
gaaaccaaaacagttgttcttttgggtcaggcagggatgggaaaatcagttctagtaaag
aagatctgccaagactggtcagctggtgggtattctgagtttgtctttgtgttttgtttt
gaatattgtcaattcagcctcactggacagcaatacagtctcaaggacttgctttttgag
ctgtctgcaaagcctgaggagaaatgtgatgaagttttcaaatatatcctccgcaatcca
catgaagttctcctgatttttgatggatttgataaagtccaagactttgacggactaacg
cattgcccagttgacttctccttcaagcagtcatacactatgaaggacctatttgcagga
attttcctaaagaagttgttgcaagggtgtacagtgctaataactgcacaactcaaggag
aagttcaaccagcacttggcaaaagcagataaagttgttgaaatcattggtttctctccc
aagcacattgatgagtacatggaaaaacattttgaaaatgtgccttatggcacagattgc
atgaaacagataaaggaatgccagtatctgttcagctactgttatattcctctcatgtgc
agactcatttgtgttgtttctgaggcagtattcaaagaaagagaccgaaaaatgccttca
actctcaccagcttgttcgccaatttaataatttataatctggtagctgcggaaccacat
tcaaacaccaacttggcagtagacaatgaatgttttgctaaattaacttctctggctttg
actctgggagaaaagcatcagaatggtttgatgcatagttattttccatcaatagacaaa
agggactttgcattgaagaatggatttatgaaaactttccctgtccaatcggaccctctg
agcaaagagaggagtgttttctcagatggtactctcgagaatttttttgttgcactgaaa
cttgtcttgtcacacacagtcaagggcaaaagtcttttgagatacatttctttcaagcct
agaaagaaaaaacttcaagatcaatttctatgcattgtccctagatttttgactggcctt
ctcttctttgaagaacacctgaacctaggcttcacctcagagaagaagacaaagaactca
gtacatgaaaagaggaatgctgtattgcagtacctgaagactctgctggaaaatgagctt
agtgctaacacgcttcttgaactttgccactgtgtgtatgaaagtcaagacaaggatctc
ctggggctcacagcttctaaactcgaaggcaatatctcttttcagagaatgcatcttacg
ccgcccgacgtccatgtactgcagcacgttctgaggaggtcttcgaatttaatgtcctta
gatttaacgaatactggcattcagctgcaagatctaaaggagttggttaatttaaacagt
gtctcaatgttcagggcttctctgggtgataccgtccgactttgggagttgcttcatcag
agtggggaatttgaaccaataagactcaccatcaagaaattcgtcatagagcctttcaag
gcaaagagcatgaaggacgttgaggatatctctgcccttgttcagtttcaagcacaaatc
ataaattgcattcatgaaattcctacaatcaagaccttgaagaaaatagaatttgcgctt
ggaccagtctggggctctgagggattctttaaacttgtgaaaattctcccagcattttca
tctcttctgcatttggacctgaatgctttaagtggaaacaacattggtgacaaaggagca
gaaaaactatctgaaatatttcgggaactaacaaagctggaaaccttagatctctcacaa
aacagaataactgaccttggtgttgagaaactggcacaagctcttccttccttaacttgc
ctacaaaagctaagcttatacaataatcaaataggtgattatggagcagaaaagattgga
gatattcttccactgttgacatctctaactgtactggccctgcagtacaaccgaataact
gacactggagcccagaagctcactgaaagtctcagaaaatgccccaacattaaacgtctg
acgatgtggaattcgactattcctcatggagttctcgagcgccttcaaaagcaagatcct
agaattagctag
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