Pleurodeles waltl (Iberian ribbed newt): 138261366
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Entry
138261366 CDS
T10800
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138261366 (TMC5)
03037 Cilium and associated proteins [BR:
pwl03037
]
138261366 (TMC5)
Transporters [BR:
pwl02000
]
Other transporters
Pores ion channels [TC:
1
]
138261366 (TMC5)
Cilium and associated proteins [BR:
pwl03037
]
Other cilia and associated proteins
Stereociliary proteins
138261366 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
138261366
NCBI-ProteinID:
XP_069066335
LinkDB
All DBs
Position
10:231317715..231731425
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AA seq
983 aa
AA seq
DB search
MSFNYDEGFDNSAYHYSETLEVDRRQHERVSPQRNPSFRQNPYDTYEDIDERRQNTMDYP
DTIPLSSINPRTENIQLVSSASLHAANPYGSGFHNPAFDSETEYADRPPSMSYGQDVYTR
SISDRHTEIDGNENLLRRRNRQSTLPAQLMNDSNSTGTDSLLEEETAMYIKKLASMSASE
RTKEIQRLPIVLKRKRELRNKVQEAKNKKSKKDGSINCCTECMYSITLSFRRSKELISDG
FQALRLWQKTLKTIGGKFGTSVLSYFIFLKWLLIFNIFSFVVNFSFITIPQLIDLPLNNL
SFSGLELLTGAGYFQETVFYYGFYTNSTIQTNVNLAAYNMQLAYIFTIGFYLLICFLSLI
YSMAKSFRENFISPNTFSAHATKLLCAWDFSVTHEKAIKERQTNLSTQVKEALSDLLHEK
LKLSTGQRIVRFIIHLLAWVLSMGTAAGCCAAVYYLSKDGVLKSQAASKSELDLQATTLV
LPIVVAIINLIMPFIYSFFGLVEKFKYPRHEAYVLILRNVCLKISIIGVLCYYWMEIVAE
STDRTKCWETLVGEDIYRLIMFDFIFCLLGSFFGEFMRRIIGTKCCKKFGMPEFDIARNV
LDLIYAQTLAWIGIFFSPLLPVIQILKLFIIFYVKKVSLMMNCVPPRRAWKASQMTTVFI
FLLFFPSFTGVLSVVGITVWSRNSSSTCGPFRNLDHPFTAISSWVDSISLTTNLQWVVWI
YHNLIESVLFFFILTLIVLIISYLYWQIIQGRKIMVKLLQEQIANEGKKKMFLLEELNQL
QKTSGVSSTNHSNTNGNAFKEPQTSYRPPDENQFAQGSGMYYPPMREGVSESLAVAMRAR
QQAISEGHRPPSQTGGASDALSLAMRAKQQAEPEGYPPSVLREGGSEALALAMGARQQAE
SEQHQLSPMKTFGLEVLQLAKEAEQQDDSEGHEQYVKGRGRENRVPDTSAWQPPHSEGYQ
PTGGSDAFVLAMRAKEQADLQGF
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaattatgacgaaggttttgataactccgcctaccattactcagagactctg
gaggtagacagaagacaacatgaaagagtctcgcctcaaaggaatccatcctttcgtcag
aatccttatgatacatacgaagacatagatgaaagaagacaaaatacgatggattatcca
gataccataccactgtcgtccataaacccgaggactgaaaacatccaacttgtttcttcc
gcctccttgcacgctgcaaatccatatggaagcggattccataatcctgcatttgacagt
gaaacagaatatgcagatagacctccttctatgagttatggccaggatgtatacaccaga
tccatctctgacagacacactgaaatcgatggtaatgaaaacctgctgcggagacggaat
agacaaagcacacttccagcgcagctaatgaatgattcaaacagtactgggactgactca
ctgcttgaagaagaaactgcaatgtacataaagaaacttgcaagtatgtcagcaagtgaa
agaactaaagaaattcagaggcttccaatagttctgaaaagaaaaagagaactcaggaac
aaggtgcaggaagcaaaaaataagaaatcgaagaaagatggcagtataaattgttgtacc
gagtgcatgtactccataactttgtccttcagacgatccaaagaattaatttccgatggg
tttcaagcactgcggctttggcagaagaccctgaaaacaattggcggaaagtttggaaca
agcgttctctcctattttatatttttgaagtggttgctgatttttaacatcttctcattt
gttgtaaacttcagctttataacaatcccgcagctcatagatctaccactgaataacctc
tcctttagcggtttggagcttctgactggagctggttatttccaggaaacagtcttttat
tatggattttacaccaattcaacaatacagaccaatgtaaatcttgctgcttacaacatg
cagcttgcatacatctttaccattggattttacctactgatctgcttccttagcctcatc
tacagcatggcaaagtcatttcgtgagaactttatcagccctaatacattttctgcacat
gcaacaaaactgctttgtgcatgggacttcagtgtaacccatgaaaaggcaataaaagaa
aggcagacaaacctcagcactcaagtaaaggaagcactctctgacctcctccatgaaaaa
ctaaagctctctactggacaaagaattgttcgttttattattcacctacttgcttgggtt
ctttcaatggggacagccgctggctgttgcgccgccgtctactacctctcaaaagatgga
gtattgaagtctcaggctgcaagtaaaagtgaacttgatcttcaagctacaacattggtt
cttccaattgtggtagctatcataaatctcatcatgccattcatctactccttcttcgga
cttgtagagaaatttaagtatcctcgccatgaggcatacgttctcattcttagaaatgtc
tgtctcaaaatttcaataattggagttctctgctactactggatggaaatcgttgctgaa
tctactgacagaaccaagtgctgggagacccttgttggcgaggatatatatcgactgatc
atgtttgattttatattttgcttactgggttctttctttggagaatttatgcgaaggatc
attggcacaaaatgttgcaaaaaatttggaatgccagaatttgacatcgcaagaaatgtt
ttagatttgatatatgcacaaacattggcatggattggcatctttttctcacctttgctg
ccagtgattcaaatcttaaaacttttcattatattctacgtgaaaaaggtcagtctgatg
atgaactgtgtgcctccccgaagagcttggaaagcttctcagatgacaacagtttttatt
tttctcctcttctttccatcttttactggagttctttcagttgtaggcattaccgtttgg
agtcggaattcctcatcaacatgtggtccattccgaaacttggatcatccattcactgcc
atctccagctgggtggactcaatctccttgaccaccaacttacaatgggtcgtgtggatt
tatcacaatttgattgaaagtgtgctgttctttttcatcctcacactcattgtcttaatt
atctcatacctctactggcagatcatacaaggaagaaagatcatggtcaaactcttgcaa
gaacagattgccaatgaagggaagaaaaaaatgttcctgctggaagaacttaaccagcta
cagaaaacaagtggagtgtcgagtacaaatcattcaaatacaaatggaaatgctttcaaa
gagcctcaaacatcatacaggccgccagatgaaaatcagtttgctcaaggttcaggaatg
tattatcctccaatgagagaaggtgtctctgagtctctggcagttgcaatgagagcaagg
cagcaggctatttccgagggacatcgaccgccgagtcagactggaggagcatcagatgcc
ttgtcccttgccatgagggccaagcagcaggctgagccagaaggatatcctccatcagtt
ctgagagaaggtggttccgaggctctggcattggctatgggggcgaggcaacaggcagaa
tcagaacaacatcagctgtcacctatgaagacatttggcttagaggttctgcagcttgcc
aaggaagctgagcaacaggacgattcagaggggcatgaacaatacgtgaaaggacgtggc
cgtgaaaatagggtacctgatacgagtgcctggcaacctcctcattcagaaggatatcaa
ccaaccggtggttctgatgcttttgtattggcaatgagagccaaagagcaagctgattta
caaggtttctaa
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