Pleurodeles waltl (Iberian ribbed newt): 138261403
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Entry
138261403 CDS
T10800
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pwl01002
]
138261403 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138261403 (USP42)
Enzymes [BR:
pwl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
138261403 (USP42)
Peptidases and inhibitors [BR:
pwl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
138261403 (USP42)
Ubiquitin system [BR:
pwl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
138261403 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
138261403
NCBI-ProteinID:
XP_069066422
LinkDB
All DBs
Position
10:complement(245965853..246634336)
Genome browser
AA seq
1368 aa
AA seq
DB search
MTIVDKLSESSNPTACQNLPCSSLAPGSGDMDSGSASWGAVSSLNDVPKHKLSLGPVPGA
AVYSNSLLPEKNKLVPQTDQCSGDGISPPQKILFPSEKICLKWQQIHRVGAGLQNLGNTC
FVNSALQCLTYTPPLANYMLSHEHTNICHEQGFCMMCTMQAHVTQALANSGSVIKPMAVI
NDLRRIAKHFRFGNQEDAHEFIRYTIDAMQKACLDGSSKLDRHTQATTLICQIFGGYLRS
RVKCLNCKGVSDTFDPYLDIPLEIKTAQSVSKALEQFVKPEQLDGENAYKCSKCKKMVPA
SKRFSIHRSSNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEAIFYVLYAVL
VHSGFSCHAGHYYCYVKASNGQWYQMNDSVVSSSDIRSVLNQQAYVLFYIRSSDLKNGDH
INSVHTPGQSSPRPLMNHRVISSKQTPSSFIGPQLPHHMIKNSNQYSGAESLKETPSCSA
TSPSSSNVKRPFSAPPSASHHNWQISRPTVIPEAAKKQKITINIHNNKLPARQGQSQPVL
QNGTLEHVNKPLPSSTVSSSSALQSTSQASASSSTNIIKQAASNDSPTKPVLNGKCKVQS
GVLVPYGEESSDESDEESKGLIQKNSYSDSMNGILSDNKVEKLKKSQTSCENSDDKPSLN
ENVTSVTVNGIISMDGDRKVNGFKHFESSSYMKSGDHAESCFLKTNGLHGKAVSTVLPSV
PEDQIVQSFIQNTTLKTLSEEEKSVHATKPKQTNEENDKEFYSTASESISHEKSENEPHL
LNCRALALSESNPVNNITKEKHIICKIKAGDTEQKLIAEKCSIVKQHNPDEYNNGEKRKP
QNKKVMLQFPIQRIKGTTEKNPHKNDCSPQRENPNETVEEGEKCARTNSFCSIRHDNVEN
NNCRTSDNLGSEDMNEGKRSKKDNSSVHVKRSDLHRIEDHHHNKVLCEENSEQATQYVNE
INDSCYKRRHSHSKERTRPDRYIERNWNSNTSRYRPYDESCRSDGGKASGKYSYNRDGFR
NREKNEHGRGRYYNSKRERYGDQERYYPDRQKQWDDYRYNNHHYSPYASRDGRDRRLLHN
DRGYDSLYYNNRPHKDFDYRSRWMHSSADKDRGRNYFSSSTLDHHPRSLFHQYSGKYHPE
ETSVSELKNCYNDTLCRINERKRKFDSSLEDSDSDGEERQRKSFNQDGPFDGERWKKHKK
SKKKKRSKDKYKYKYTDSDESSACSDSDNHRYKKKKKKKRRHERKYEGYCGDSDHLTKLA
SYSGPEKSALSTDDCHLGYFGPLDKDHRNYDDERHHKPEQCLKTKYIPIKCEENGYYRED
ECHIDSFYPLPYRHGPRVVSEYSHIDIPRFGHECSHPCKDVEPDRVLN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaaactctccgagtcctctaaccctacggcgtgccaaaacctgcct
tgcagctctctggcaccaggttcgggagatatggactcgggctctgcaagttggggtgca
gtttcatctttaaatgatgttccaaaacacaaactgtctttgggacctgtacctggagct
gctgtgtattccaattcattgttgcctgaaaaaaataagctagttccacagactgaccag
tgttctggcgacggaatttctccaccacagaaaatcctatttccatcagagaagatttgt
ttgaaatggcaacaaatacatcgtgttggagctggactccagaatcttggcaatacatgt
tttgtcaactctgctttacagtgcttgacttacacaccacctcttgcaaactatatgctt
tctcatgaacataccaacatatgtcatgagcaagggttttgcatgatgtgtacaatgcaa
gctcatgtcacccaggctcttgctaattctggcagtgtcattaagcctatggctgtcatc
aacgaccttagacgtatagcaaaacatttccgttttggaaaccaggaagatgcacatgaa
ttcattcgctacactattgatgctatgcagaaggcgtgtctagatggtagcagcaagttg
gacagacatacccaagccacaactctcatttgtcaaatatttggaggctacctgcgttcc
agagttaagtgcttgaactgcaaaggcgtttctgatacctttgatccataccttgacatt
ccattggaaataaagacggctcaaagtgtaagcaaagctttagagcagtttgtaaagcct
gaacaacttgatggggaaaatgcgtataaatgtagcaagtgtaaaaaaatggtccctgct
tctaagagatttagtatacatcgatcttccaatgttcttactttatccttgaagaggttt
gcaaatttcagtggtgggaaaattacaaaggaagtgaaatatccagaatatttagatata
cgtccatacatgtctcagcctaatggtgaagcaatattttatgtgttgtatgctgtcctt
gtccatagtggtttcagctgccatgctgggcactactactgctacgtgaaggccagtaat
gggcagtggtaccagatgaatgactctgtcgtttcaagcagtgacattcggtctgtgctc
aatcaacaagcctacgtgttgttttacatcagatccagtgacctgaaaaatggggatcat
attaattctgtgcatactccaggacagtcctctcctcgacccttaatgaatcaccgtgtc
attagtagtaagcaaacgccgtcttcatttattggacctcagctgcctcatcatatgatt
aagaattcgaatcagtatagtggtgctgaatcactgaaagaaactcctagctgttctgca
acaagtccaagcagctcaaatgtaaagcgtccattttcagctccaccatcagcttctcac
cacaactggcaaattagtaggccaacagtgattccagaagctgcaaaaaagcaaaagatc
acaatcaatattcacaataacaagcttccagctcgtcaagggcagtcacaaccagttctt
cagaatggtactttagaacatgtaaacaagccattaccttcatcaacagttagcagttct
tctgcactacagtctacctcgcaagcttctgcatcatcgtctactaacataatcaaacag
gctgcatcaaatgacagtcctacaaaaccagttctgaatggcaaatgtaaagtacagtca
ggtgtattggtcccttacggagaagagtcttcagacgaatctgacgaggagtccaaagga
ttaatacaaaagaatagctactcagattctatgaatgggattcttagtgacaataaagtt
gagaaattaaagaaatcccaaactagctgtgagaattcagatgataaaccctccttgaat
gaaaatgtgaccagtgttactgttaatggcatcattagtatggatggtgaccgtaaagta
aatggcttcaaacattttgaatcatcatcctacatgaaatctggggatcacgctgaaagt
tgttttctgaaaacaaatgggttacatggaaaagcagtttccacggttttgccatctgtt
ccagaggatcaaatagtgcagtcatttatacagaacaccacattgaaaactttgtcagaa
gaagaaaaaagtgtacatgcaacgaaaccgaaacagaccaatgaagaaaatgataaagaa
ttctattcaactgccagcgaaagcatctcccatgaaaaatcagaaaatgaacctcacctt
cttaactgcagagccttagcactatcagagtcgaatccagtaaacaacattaccaaagaa
aaacatatcatatgtaaaataaaagctggcgacacagaacaaaagttaattgcagagaaa
tgcagcattgtaaagcagcacaacccagatgaatacaacaatggggaaaaaaggaaacct
caaaataagaaagttatgttgcagtttcctattcagagaattaaagggactactgagaaa
aaccctcataaaaatgactgtagtccacaaagagagaatcccaatgaaacagtggaagaa
ggtgaaaaatgtgctcgtactaatagcttttgttctataaggcatgataatgtagaaaac
aacaactgcagaactagtgataaccttggtagtgaagatatgaatgagggaaagcggagt
aagaaagataactcctctgttcatgtgaaacgcagcgacttacacagaatagaggaccac
catcataataaagtactttgtgaagaaaactctgaacaagcaacccaatatgtaaatgaa
ataaatgacagctgttataaaagaaggcattcccatagcaaggaaaggactaggccagat
agatatatagagcgaaactggaatagtaatacgagtagatacaggccttatgatgaaagt
tgtcgttcagatggtggcaaggcttcagggaaatacagctataatagagatgggttccga
aacagagagaaaaatgaacatggaaggggtagatattacaatagtaaaagagaaagatat
ggcgaccaggagagatattatccagatagacagaaacaatgggatgactatagatacaat
aatcatcattattctccttatgcttcccgagatggcagagatagaaggttgttgcataac
gacagagggtatgatagtctatattacaacaatagaccacataaagattttgattacaga
agcaggtggatgcacagttcagctgataaagacagaggaagaaactacttcagcagttcc
acactagaccaccatcccagatcattgtttcatcagtactctggaaagtaccatccagag
gaaacctctgtctccgaattaaagaattgttataatgacactttgtgcaggattaatgaa
aggaaaagaaaatttgatagcagcctagaagatagtgacagtgatggagaagaaaggcaa
agaaagagcttcaaccaagacggtccttttgatggggaaagatggaaaaaacacaaaaag
tctaagaagaaaaaacgatctaaagataaatacaaatataaatatactgactcagatgaa
tcttcagcttgctctgactctgacaaccacagatacaaaaagaaaaagaagaaaaagaga
agacatgagagaaaatatgagggctattgtggagactctgatcatcttacaaaactagct
tcctattctgggccagagaagagtgcccttagcacagacgactgtcatctaggatatttt
ggacctctggataaagaccaccgaaattatgatgacgagcggcatcacaagcctgagcag
tgcttaaaaacaaaatacattccaataaaatgtgaggaaaatggttattacagggaagac
gagtgtcatattgatagcttttatcctctgccataccgacatgggcctagagtagtttct
gaatatagtcacattgacatacctagatttgggcatgaatgttcacatccctgtaaagat
gtagagccagatagagtgttaaactga
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