Pleurodeles waltl (Iberian ribbed newt): 138261496
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Entry
138261496 CDS
T10800
Symbol
MGRN1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04120
Ubiquitin mediated proteolysis
pwl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138261496 (MGRN1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
138261496 (MGRN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138261496 (MGRN1)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138261496 (MGRN1)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138261496 (MGRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
138261496
NCBI-ProteinID:
XP_069066582
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Position
10:complement(309266376..309587688)
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AA seq
550 aa
AA seq
DB search
MGSVLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDGVDSPAEENAKPKVLYSL
EFTFDADARVAITISCQATEELVGGMAVYSTKNPAMQSETVHYKRGVNQQFSLPAFKIDF
TEWKDDELNYDLDRGVFPIVIQAIVDEGDEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNSQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVKKKPGALSPVSFSPVLAQSLDHDEHSGSDNIPP
GYEPISLLEALNGLRSISPQLPTAPLYDAITYSGMGDGLSSRPLGGIDRVTETSHQKNKI
SVSPDGTLRSPSSPIHEEDEEKLADDIDLQLPTPCELQLIRRESRSIPAEDITESCSLND
GSRPQSMEDILHDSISERRSLTETASDPPLDLCLPGSSDSTESLKSHGTNSSIQPLLNFT
TVHLEEEQNL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggggtcagttctgagccgcagaattgctggagtggaagatattgacattcaggcaaat
tcggcttacagataccctccaaagtcaggaaactactttgccagtcattttttcatgggt
ggtgagaagtttgatacaccgcacccagaggggtatctgttcggagagaatatggatctg
aacttcctgggcaacaggccagttcagtttccatatgtaacacctgccccccatgaacca
gtgaagacgttaagaagtttggtgaatattcgaaaggattctcttcgtcttgtgaggtac
aaagatggtgttgacagtccggctgaggagaatgcaaaacccaaagtgctgtatagcttg
gagttcacatttgatgctgatgcccgcgtcgccatcacaatttcatgccaggctacggag
gagttggttggtgggatggcagtgtacagcacaaaaaaccctgcaatgcagtcagagact
gttcattataagagaggtgtcaaccagcagttctctttgcctgccttcaaaatcgacttc
actgagtggaaggacgatgagctaaactacgacttggatcgaggagtcttccccattgta
atacaggctattgtggatgaaggagatgaagtcacagggcatgctcatgtgttgctggca
gcttttgagaagcatgttgatggtagcttctctgtcaagccactcaaacaaaaacaaatt
gtggatcgtgtcagttatcttctgcaggagatttacggtattgaaaataaaaacagccaa
gagaccaagccttctgatgatgagaacagtgacaacagcagtgagtgtgtggtgtgcctc
tcggacttgcgtgacaccctcattctgccttgccgccatctatgtttgtgcaactcatgt
gctgatactcttcgttatcaagcaaataactgccccatttgcagattgccattccgggca
ctcctgcagatccgtgcagttaagaagaagccaggtgcgctatcaccagtctccttcagt
cccgtgcttgctcagtctctggaccatgatgaacattctggctctgacaacatccccccc
gggtatgagcccatatcgctactggaggctttgaatggccttagatctatctctcctcag
ctccccactgcacctctgtatgatgccatcacctactctggaatgggagatgggttaagt
agcagacctctgggtggaattgatagagtgactgagacaagccatcagaagaacaagatt
agcgtgtctcctgacggtacattaagatcaccttcatctccaattcatgaagaggacgag
gagaaactggctgatgacatagatttgcagctgcccacaccatgcgaattacagctaata
aggagagagagccgtagtattccagctgaggatatcacagaatcctgctcgttgaatgat
ggcagccgaccacaatcaatggaagatatactccacgacagcatcagtgagcgccgaagc
cttaccgaaacagcaagtgatcctccgttggatttgtgccttccaggatcttcagactcc
actgagagcctcaagagccatggcaccaatagctcgatacagcccctcctcaatttcacc
acggttcatttggaggaggagcagaacctgtga
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