Pleurodeles waltl (Iberian ribbed newt): 138261559
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Entry
138261559 CDS
T10800
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03013
Nucleocytoplasmic transport
pwl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138261559 (RNPS1)
03015 mRNA surveillance pathway
138261559 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138261559 (RNPS1)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138261559 (RNPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
138261559
NCBI-ProteinID:
XP_069066721
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All DBs
Position
10:397303094..397389214
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AA seq
304 aa
AA seq
DB search
MERAGAAESGRQRGSGRGRKMAPSPSKRKDRSDDKSKDRPKEKPATKESGDKERGRDKTR
KRRSTSTGSSSSSRSSSSSSSSSGSSSGSSSGSSSSSASSRSGSSSSSRSSSSSSSSATP
SPSRRRHDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVYIGRLTRNVTKDHILEIFATY
GKIKMIDMPVDRLHPHLSKGYAYVEFEVPDEAEKAVKHMDGGQIDGQEVTASGVLTPWPR
PGLRRFSPPRRMLPPPPMWRRTPPRMRRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSS
NSSR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgccggagcagcagagtcaggacggcagagaggttcgggccgcgggaggaag
atggctccctctccatcaaaacgcaaggaccgttcagatgacaaatctaaagatcgtccc
aaggagaagccagcgaccaaggaatctggagacaaagaacgtggcagagacaagactcgc
aaacgccgcagtacctccactgggagcagcagcagcagccgatccagctcttcttccagt
tccagctccggctctagttctggttcaagtagcggctccagctcctcctctgcctcaagc
agatctggtagctcaagctcctctcgctcttccagctccagtagctcatcagcaacccca
agtccatcccggcggcggcatgacaacaggaggcgttcccgttctaaatcgaagcaaccc
aaaagagatgaaaaggagcggaaacggcgtagtccaagcccacgaccaacaaaagtgtac
atcgggagactgaccagaaatgtgacaaaggatcacattttggaaatctttgctacctat
ggaaagattaagatgattgacatgccggtagatcggttgcaccctcacctttcaaagggt
tatgcctacgttgagtttgaggtcccagatgaggctgagaaagctgtgaagcacatggat
ggaggtcaaattgatggccaggaggtcacagcttcaggagtgttgactccgtggccgagg
cctggactaaggcgctttagtccaccaaggaggatgctaccaccaccacccatgtggcgt
cggacacccccacgcatgaggagaaggaggagtcggtctccaagacgcaggtctccggtc
cgccgtaggtcccgctcccggtcgccaggacgaagacgtcatcgcagccgctccagttca
aactcctcccgataa
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