KEGG   Pleurodeles waltl (Iberian ribbed newt): 138261563
Entry
138261563         CDS       T10800                                 
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pwl03037]
    138261563 (IFT140)
Cilium and associated proteins [BR:pwl03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   138261563 (IFT140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR19_1st ANAPC4_WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N WD40 TPR_IFT80_172 TPR_GEMI5 Clathrin TPR_COPA_B tRNA_int_end_N2 WD40_MABP1-WDR62_1st TPR_2 PPR_2 RNase_HII WDR90_beta-prop_4th PPR Ribosomal_L50 Consortin_N
Other DBs
NCBI-GeneID: 138261563
NCBI-ProteinID: XP_069066729
LinkDB
Position
10:complement(398539039..400331549)
AA seq 1466 aa
MAVYLDNRIDAPESAGVPSQISWHSLHPLLAVMSVNDASAGSVDIYQGQGEHVPGAHLER
PFLAVSFTWHPNKRILAVGWENGEVLMFNEQEKEQHSVPTTHGSAVTVLEWSPNGSRLVS
GDSSGVLAMWRLDHRGRVQGAPLVKHEYGKMLSHCTFKPLPPGEDVALLAKAAVSGDERA
LDMFNWRKSGRGPQIKVGSQDGHSFFVSAADGSVHCVNEKGRTMQALCTDSPVRTLLFIE
KKDLLVVVTENLLLAQYTISPEGEAEERMKVKLSGKTGVSADIVWVERSLLITATGETVI
RLWDLERDENYALSLDEQLGFENAESINCVSYCSTKGMLAAGTNKGRVAMWRKVSTASHK
SWKTEGKDYWKLQTPTELDGNITQIRWGSGDNLLAVKNLSSVLILSEQVMSSHFHQQVAA
AQVAPTQLHLTYFSTGVQHSLRTEIYVKGVFVTKDAIAVWNGKQVTVFEPSGATLRNTGS
FSCESPVLAMHEENIYTVEPNRVQVRTLQGTVKQLLVFSETEGNPVILDVSQSFLAVATD
LAHFKVFDLSRREAKAHCNTKNLAEFAPGYRSIVSLKCNANGSRVSILANKAEGTPDSKM
YFYDVEMDTMTFFDFWTGRTDGVEASSLSGQEPDSKNVLENTGLLHRIPISHFWDQTEPR
LIVCEAELAVPDTRKEKRSRQAHEKNLERTGNMVDVWIMSFFSTQEYGLLLQDSFARQAT
HQALLGIEVPHYYFIKKSGEKDKDAKAEVGSSSWIPQMVSKRPLRDFVGLEDCDKNTREA
MLNFSFYLTIGDMDEAFKSIKLIKSEAVWENMARMCVKTRRLDVAKVCLGNMGHARGAKA
LREAEREQELEAKMAMLAIQLGMLDDAELLYKSCKRYDLLNKFYQASGQWQKAIEVAEIH
DRVHLRSTYYNYGKHLEVTGDRNNALSYYEKSDTHRFEVPRMLLDDPQSLEIYINKSKDK
SLWKWWAQYLESQADMDAALKYYELAQDYLSLVRVHCFLGNIQRAAEIANETGNWAASYH
LARQYESQDELKQAVHFYTRAQAYNNAIRLCKENNLDDQLMNLALLSTPEDMMEAAHYYE
EKGEQMDRAVMLYHKAGHFSKALELAFATQQFGALQLIAEDLDENSDPALLARCSDFFIE
HNQFEKAVELLLAAKKYYEALQLCLEQNLIITEEMAEKMTVSKDSKELSEDSRRELLERI
ADCCMRQGNYHLATKKYTQAGNKLKAMRSLLKSGDTEKIVFFATVSRQKEIYIMAANYLQ
SLDWRKEPEIMKNIISFYTKGRALDLLAGFYDACSQVEIDEYQNYEKALGALTEAYKCLS
KAKMRNPQEQESKLVDLQSKMALVKRFIQARRAYSEDTKEAVRQCELLLEEPDLDSAIRI
GDVYGLLVDHYSQQEEFQMAYKCLEEMRKRLPSVNLTYYVNQRTMEAVHRALGIPLSRNS
VPERIRHNSMEDGEEVDEEVADEIET
NT seq 4401 nt   +upstreamnt  +downstreamnt
atggctgtttacctcgacaacagaatcgatgctccagaatccgctggggttccctcgcaa
atctcatggcacagtcttcatccacttctggcggtcatgtcagtgaatgatgcctctgcg
ggaagcgtggatatttatcaagggcagggtgagcatgttccgggtgcccacctggaacgc
cccttcctggctgtctcctttacttggcaccccaacaagcgcatcttggctgtgggttgg
gagaatggcgaagtactgatgttcaatgagcaagaaaaggagcagcactctgtccccacc
acgcatgggtcagctgtcactgtcttagaatggagccccaatggcagccgcctagtatct
ggcgatagcagcggtgttcttgcgatgtggcggctggaccatcgaggccgggtacaaggt
gctcctttagtgaaacacgagtatggaaagatgctgtctcattgcacctttaagcccctc
ccacctggcgaggacgtggcactgctggcgaaggcagctgttagtggtgacgagagagcc
ttggacatgttcaactggaggaagtctggcagaggacctcaaataaaagtcggctcccag
gacggacacagcttctttgtcagcgcagcagatggatctgtgcattgtgtgaatgagaaa
ggaaggacaatgcaggcactgtgcacagacagtccagtgcgaacattgctcttcattgag
aagaaggatttgctggtagtggtgacggagaacctgctgctggcccagtataccatcagc
ccagaaggtgaagctgaagaacgtatgaaggtaaagttaagtggtaagactggtgtgtca
gctgatattgtttgggtggaacgcagccttcttatcacagccacaggggagacggtcatc
aggttatgggacctggagcgagatgagaactatgccctctcattggatgagcaacttggc
tttgaaaacgcagagtccataaactgtgtatcctactgcagcactaaaggaatgcttgct
gccggaactaacaaaggtagagtagcaatgtggaggaaagtgtctactgccagtcataaa
tcttggaagacagaggggaaagactactggaagctccaaacacctactgaactggatggc
aacatcacgcagataaggtggggctcaggggacaacctactggctgtaaagaacctcagt
tcagtgcttattcttagcgaacaggtgatgtcgtctcactttcaccagcaggttgctgct
gcgcaagtggctcccacccagctccatctcacctacttcagcacgggagtccaacacagc
ctgcgcactgagatttatgtaaaaggagtctttgtaacaaaggatgcaattgcagtctgg
aatgggaagcaagttactgtatttgagccgtctggagctactctacgaaatacaggctcc
ttctcctgtgagtctccagtccttgctatgcacgaagaaaacatttacacagtggagccg
aaccgggtgcaggtccgcactttgcagggtactgtcaagcagttgttggtgttctcagag
actgagggaaatccagtcattttggatgtctctcagagtttcctggctgttgcaacagat
ttggctcattttaaagtctttgatctctctcgcagggaggcgaaggcccactgtaacacc
aagaatcttgcagaatttgccccaggttacagatccattgtatccttaaagtgcaatgcc
aacggcagccgagtcagcatcctagccaacaaggctgaaggtacaccagactccaaaatg
tatttctatgacgtggagatggacacaatgaccttcttcgatttctggaccggcaggaca
gatggtgtggaggcctcatccctctctgggcaagagccggactccaaaaatgtactggag
aatactggcctgttgcaccgcatacctattagtcatttctgggatcagactgaaccacgg
ctgattgtctgtgaagcagagttggcagtcccagacacaaggaaagagaagcgctccaga
caggcacatgagaagaatcttgaaaggactggaaacatggtggatgtgtggatcatgtct
ttctttagcacccaagagtatggcctcctgctccaggacagcttcgccaggcaagccact
caccaggcacttttgggcattgaagtgccacattactattttattaagaagtctggagag
aaagataaagatgcaaaagctgaagttgggtcttcctcctggattccccagatggtgtca
aaaaggcctctgcgggactttgtcgggctggaggattgtgacaagaacacacgtgaagct
atgctgaacttcagcttctatcttaccattggggatatggatgaggccttcaagtctatc
aagctcatcaagagtgaggctgtctgggagaatatggcacggatgtgcgtcaagacgagg
agactggatgttgccaaagtatgcctagggaacatgggtcatgccagaggggcaaaggca
cttagggaagctgaacgagaacaagaactggaagccaaaatggccatgctggcaatacag
cttggcatgctggatgatgctgagctgctgtataagagttgcaagcgctatgacttgctg
aacaagttctatcaggcttcagggcagtggcagaaagcaattgaagtggcggaaatccat
gacagggtccacctgcgttccacctactacaactacggcaagcacctggaggtcacagga
gatcgaaacaatgctctcagttactatgagaagtcagacacccatcgatttgaggttccc
aggatgctcctagatgacccgcaatcattagaaatctacatcaataagtcaaaagataag
agcttgtggaagtggtgggcccagtatctagaaagtcaagcagacatggatgcagctttg
aagtattatgagctggcacaagattacctctcacttgttcgtgttcactgcttcctggga
aacatccagcgggcagctgaaatagctaacgaaactggaaactgggcggcatcctaccat
cttgctcggcagtatgagagtcaggatgagctgaagcaggctgtgcacttctacacgagg
gcacaggcttacaataatgccattcgcttgtgtaaggaaaataacctggacgaccagttg
atgaatctggcactgctgagcacccctgaggatatgatggaagctgctcactactatgag
gagaaaggcgagcagatggacagagcagtcatgctgtaccataaggcgggacatttctcc
aaagccttggagctggcctttgctactcagcaatttggggcattgcagcttattgctgag
gaccttgatgagaattcggacccggcattgctagcacgctgctcagatttcttcattgag
cacaatcagtttgagaaggctgtggaactgttgctggctgcaaaaaagtattatgaggcc
cttcaactgtgtctagagcagaatctgatcatcactgaggagatggctgaaaaaatgaca
gtctctaaagactccaaagagctatctgaagactccagacgagaactgctcgagcggatc
gctgactgttgtatgcgacaaggcaactatcatttggctaccaagaaatacacacaagca
ggaaataagctaaaggcaatgaggtccctcctgaagtctggtgatactgagaagattgtg
ttctttgctactgtgtcacgacagaaagagatctatattatggctgcaaattaccttcaa
tcattggactggcgcaaggaaccagagatcatgaagaatattattagcttctacaccaaa
ggaagggctcttgacctgttagctggcttttatgatgcttgttctcaggttgagattgat
gagtatcagaattatgaaaaagctttgggtgcattgactgaagcatacaagtgcctttct
aaggctaagatgaggaacccccaagagcaggagagcaagcttgttgatcttcagagcaaa
atggccttagtaaaaaggtttatccaggctcggagggcttactccgaggacaccaaagag
gccgtgaggcagtgcgagcttctcttggaagagcctgacctggacagtgccatacgcatt
ggtgatgtgtacgggctcctagttgatcattattctcagcaggaggagttccagatggcc
tacaagtgtttggaagagatgcggaaaaggcttccttctgtgaacctgacctattacgtc
aaccaacgtaccatggaggcagttcatcgcgcccttggcatccccctgagtagaaacagc
gtgccagagcgcatccggcataacagcatggaggatggagaggaggtggatgaggaggtt
gctgacgaaattgagacataa

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