Pleurodeles waltl (Iberian ribbed newt): 138261600
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Entry
138261600 CDS
T10800
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138261600 (SMARCD3)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138261600 (SMARCD3)
PBAF complex
138261600 (SMARCD3)
GBAF(ncBAF) complex
138261600 (SMARCD3)
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GFIT
Other DBs
NCBI-GeneID:
138261600
NCBI-ProteinID:
XP_069066806
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Position
10:439997845..442602350
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AA seq
503 aa
AA seq
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MAAEEAAGGARKATKSKLFEFLVNSVRRHNLSLIVTIGHSDTGEGSLLDHAERPGMQSGA
RMPHQGAPMGPPGPPFGGSPSVRPGMPPTALEPTRKRSVPQQAQQQQQQSSQNRSRSAKR
RKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLY
ISNTFNPAKPDAEDSDGSIASWELRVEGKLLEDPSKLKRKFSSFFKSLVIELDKDLYGPD
NHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTR
SAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCTRLKFSEIPQRLTNLLLPPDPIV
INHIISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESIN
QLKIQRDFMLSFSRDPKGYIHEWLRSQSRDLKTMTDVVGNPEEERRADFYHEPWSQEAVS
RYFYCKIQQRRQELEQSLGVRNT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagaagaggccgccggaggggcccgcaaggccactaaaagcaagctgtttgaa
ttcctggtcaacagcgtgaggcggcacaatctttcgttgattgttacaattggacattcc
gacacaggagagggatcactgcttgaccacgcggagcgtccagggatgcaatcaggggct
cggatgccccatcagggagctcccatgggtccgcctggcccaccatttggtggcagccct
tcagttcgtcctggtatgccaccgacagcgttagaaccaacccggaaacgttcagtgcct
caacaggctcagcaacagcagcagcagtcctctcagaatcgaagcagaagtgccaaaagg
aggaagatggcagacaagatccttcctcagcggatcagagaattggttccagagtctcag
gcatacatggaccttctggcatttgaacgtaaacttgatcagactattatgagaaaacgt
gtggacatccaagaagcattaaagaggccaatgaagcaaaagagaaaactgagattgtac
atatcaaacaccttcaaccctgctaagcctgatgccgaggactctgatggcagcattgca
tcctgggagctccgtgtagagggcaaactacttgaggatcccagtaaactgaagcgaaag
ttttcctccttcttcaagagtttggtgatcgagttagataaagatctctacggtcctgac
aatcatctggtagagtggcatcgtactccaacaacgcaggaaactgatggttttcaggtg
aaaaggcctggagatgttagtgtgcgatgcactcttctgctgatgctggactatcaacct
ccacaatttaagttggatccccgcctagctcgccttcttggaatccacacacagacccgg
tcagctatcatccaagcactttggcagtacatcaaaaccaataaacttcaggattcacat
gataaggagtatatcaactgcgacaagtatttccaacagatctttgattgtactcgtctg
aaattctctgaaattcctcagagacttacaaaccttttgctgccgccggaccccattgtg
attaatcacattatcagtgttgatcccaatgatcaaaagaagacagcttgttacgacata
gatgtggaggtagaggatccactcaaaggacagatgagcagctttctactgtcaaccgcc
aaccagcaggagatcacagccctggacaacaagattcatgagaccatagagtccattaac
cagctgaagattcagcgagactttatgttgagcttctcccgtgacccgaaaggatatatc
catgaatggctgcgatcccagagcagagatctcaagacaatgacagatgtggttggtaat
ccagaagaagaaaggcgagccgatttttaccatgagccttggtcccaagaagcagtcagt
cggtatttttactgcaagattcagcagcgtagacaagagcttgaacagtcgctcggtgta
cggaacacttag
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