Pleurodeles waltl (Iberian ribbed newt): 138261664
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Entry
138261664 CDS
T10800
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138261664 (RLIM)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138261664 (RLIM)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138261664 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING-like
Pentapeptide_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
138261664
NCBI-ProteinID:
XP_069066998
LinkDB
All DBs
Position
2_1:complement(102708600..102806599)
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AA seq
795 aa
AA seq
DB search
MESGDSNDKGGSEQSEGQRQSQLERLNREEAFYQFVNNLNEEDYRLMRDNNLLGTPGEIT
EEELLRRLQRVKEGPPPQTNDENRGSESAEDASNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNPAPEGGNEPSVGASNTDELMENGNLSDSVTP
SSESATDNHASTDIADSEVVMTEEAIHEEASSDGVIEDGVCAQGTSLETSILERANLESV
ISEASNLEMMNSISEAAILERASREAASLERASFEAASLERIGLEAANLERVRLEAASRE
AVCLESTSSEPSCRQSLSPPTSCEERNHSEHACLETANVRLAGMESSTSIGAVAEESSPQ
RGQRRARSRSPEQRRTRARTDRSRSPLSPVSETPPRSSPTSDQFLANEQEGSSRTRRHVT
WSHPLNHSPVNEADGSSRTRQHVTLRQHTAGTEAITQNAVQFSTPEARNAPPAPVPETTG
SSEPAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNETVTYESERGGFRR
TFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYNDND
ADPSMPVPVQNPAADPAEAQNVSSSSSSSSSDSTEASPGEVYEGGNDGVNEGINEGGNEG
SNEGSAEGGMEGGSTTGGRREGRNNRGLVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLT
KEQIDNLSTRNFGENDALKTCSVCITEYTQGNKLRKLPCSHEYHVHCIDRWLSENSTCPI
CRRAVLAVGNRESVV
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggcgattctaatgataagggtggttcagagcagtcggaaggtcaacggcaa
agtcagctagagcgattgaatagagaggaagccttctatcagtttgtaaataatctcaat
gaagaggactataggcttatgagggataacaacttgcttggtactccaggtgaaataaca
gaagaggagttactgagaagattgcagcgagtcaaggagggccctccaccacaaaccaat
gacgagaacagaggttcagaatctgcagaagatgcatccaatggagattcaattatagat
tggttgaattctgtgaggcaaactggaaacacaactcgaagtgggcaacgagggaaccag
tcctggagagctgtaagccggacaaacccaaacagtggtgacttcagattcagtttggaa
atcaacgtcaatcgaaataatggcaatccagcccctgagggtggaaatgaaccatctgta
ggtgcttccaataccgatgaactaatggaaaatggcaatctaagtgatagtgtgactccc
agttctgagtctgcaactgataatcatgctagcaccgatatagctgattcagaagttgtg
atgacagaagaagccattcatgaagaagctagcagtgatggagttattgaggatggagtg
tgcgctcagggtaccagcttggaaacctccattcttgaaagagccaatttagaaagtgtt
atttcagaagctagcaatctggaaatgatgaactccatctcagaagctgctattctggaa
agggctagcagagaggcagccagtttggaaagagctagctttgaagctgcaagtctagag
cggatcggcttagaagctgccaacttagaaagagtcagattggaggctgccagccgggaa
gcagtgtgtctagaatctacaagttcagaacctagttgccgacagagcttgagcccgcca
acttcttgtgaggaaagaaatcattcagagcatgcatgtctcgaaactgctaatgtaaga
ttggctgggatggaaagtagtacctccataggagcagttgctgaggaatcctctccacag
agaggtcaaagaagagcaagaagccggagtcctgagcagcgaagaactagggcaaggact
gatagaagtaggtcacctctcagtccggtgagtgagactcctcctaggtcatctccaact
tcagatcagtttttagccaatgagcaagaaggaagctctagaaccaggcggcatgtgaca
tggtctcatcctttgaatcattccccagtaaatgaggctgatgggagctccagaactaga
caacatgtgacattacgacagcacacagctgggacagaagcgattactcaaaatgcagta
cagttttctacaccagaagccagaaatgcgcctcctgcaccagttcctgaaactaccggc
agtagtgagcctgcagcacctggacaaagacctccaaccattgtcctcgacctacaagtg
agaagagtacgtccaggggaatatcgccaaagagacagcatagctaatagaactcgctcc
aggtctcagaccccaaatgaaacagttacttatgaaagtgagcgtggtggtttccgtcgc
acgttttctcgatctgaacgtgcaggtgtacggacttatgtaagcacaatcaggattcct
attcgcagaattttgaacactggtttaagtgagaccacctcagttgctattcagaccatg
ctgaggcagataatgactggatttggagagctaagctatttcatgtacaatgataatgat
gctgatccaagcatgcctgttcctgtacaaaatccagctgcagaccctgcggaggcacaa
aatgtcagtagcagcagtagtagtagttctagtgacagtacagaagccagccctggagaa
gtgtatgaaggtggcaatgatggtgttaatgaaggcattaatgaaggaggcaatgagggc
agtaatgaaggcagtgctgaaggtggcatggaaggtggctcaacaactggtggtaggcgg
gagggtcgtaataaccgaggattagtcacctttgaagaaagtggctctttgccatttctt
agcctcgcacaattcttccttcttaatgaggacgatgatgatcaaccaagaggactcacc
aaagaacaaatagataacctgtccactagaaattttggtgaaaatgatgctctgaagaca
tgcagtgtttgtatcacagagtacacacaaggcaataagctccggaaactgccttgttca
catgagtaccatgttcattgcattgatcgctggttatcagaaaattccacgtgtcctatt
tgtcgtcgagctgtcctggcagtgggcaatagagagagcgttgtctga
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