Pleurodeles waltl (Iberian ribbed newt): 138261740
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Entry
138261740 CDS
T10800
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138261740 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138261740 (ATRX)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138261740 (ATRX)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
138261740 (ATRX)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
138261740 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
138261740
NCBI-ProteinID:
XP_069067162
LinkDB
All DBs
Position
2_1:complement(109492200..110631099)
Genome browser
AA seq
2391 aa
AA seq
DB search
MTAEPMSESKLNKLVQKLHEFLAHSSEESEDANSPTGRSVSKVSVLNKSTKLCPVENMEE
GSSSSEKSKSVLSSRSKRKPSFVTKYVESGDEQTEEIPPEDESNENSENEVDMDRLPKGT
VVVQPEPVLNEDKDDFKGPEFRSRTKIKMEIPKKRGEEGLQGIVNCSACGQQVNHFQKDS
VCRHPALKVLICKACYKFYMSDDINRDADGMDEQCRWCAEGGNLICCDYCHNAFCKKCIL
RNLGRKELSAIMDETTKWKCYICSPEPLVDLIRYCDSVTENLEQFLQQNKKKIKVELDGK
MPDQMHKRPEKSNSSCNGPDRLDNSCTSSFTYSYKALMVPKELLKKVKKLVETTANLNAS
FVRFISQKNDNSNLTPNVKMRQLKAFKSVLHDLKKAHVALDESLNCEIHDLESKAKNKNA
KENHLENNKYKRKEKTVGKVDRMLEKKSNKVTTLIENVDEGEKSDIEEEQIEKSDEVIKH
MIIADENSDQMYMDTAEEKLVKTSDQIGEKTDKYNLEGKGEKTIDEDKGEKSEDRRAIKL
GRQKAEKNDGRDKGARRVDWSQEGKPGNKDFDSGDDRREDEPTGELHGGGDTPEDGDKEV
KGDLEQESEVSGTLVEGEQIGDKPLETNSSLLTIENCELEAKDGEALKTEDDEVGDVDRE
VFECGIKADKSKNYKKENLSDENDKQESKRLNEKIRKKVSDSKEKHDRIKTDEEMSKTTK
NNCSDSKKFINSKNQHGDKKSNKDNHFENSDPEAFDSDILSVPTSVPVDILENMCSTAVA
NATSDEKNNVLTSPVTSSPSKPILTPIKDIDEKAKGVRSLLVKINPLSLSGSLIKHKKNS
GKGEIEEVESDMATKEDSAQDKVNDCITEKKPILLKDESDLRRSPRVKTTPRRRPTDGHS
LANSGGESSGTDPKVKQKSKKLQKQKVNAAEQSSSDSDGTSLLKKSLSVKAGNKARKNKS
CSDSDEEMPEVLKLAAQMSPSSSDLDSTNETFKSANSFKDPKKALISDKGKRKRKSSSSD
SDSPCRQTRVTRNSASKKRKSRPESSKCDYESEKDLSKLESKNKRKKSRSDEDSEETQKN
QKRSPKLPNRKGDGKGTVLAIQDISSSSDIEDDDQDADQNSVGDRSSDEQKIMPVTENVL
MSSAAGFCQSSGDEAKSGPIALDDDDDDDDPENRIAKKMLLEEIKANLSSDDDEDDSSDE
ESNNGKKKAGKEKAKDVEEDAGSTSDSDSDSELDKKPRYRHKLLRKKLSLNEGESGEESK
SDKDKGKKDKSKDVKDRKPRTRRKVNSDDSNDSDFKKSRDSAAASESGISEEVSDSDSDQ
RPRTRAAKKEAEENRSYKQKQKKKRRRIKVQDDSSESKNNSEDGEGDEDGEDDSDSKSPG
KARKKIRKILKVEKLRTETQNALKEEEERRKRIAEREREREKLREVVVVEDASPVKCPIT
TKLILDEDPETKEPLVQVHRHMVTKLKPHQVDGVQFMWDCCCESLKKTKKESGSGCILAH
CMGLGKTLQVVAFLHTVLLCENLDFSTALVVCPLNTALNWLNEFEKWQEGLADDESLQVN
ELATIKRPQERGDILKTWHEEGGIIIIGYEMYRNLTQGKNVKSKKLKEIYHRTLVDPGPD
FVICDEGHILKNEASAISKAMNSVQTRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSVK
EFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKYEYV
LAVRLSPIQCKLYRYYLDHLTGANFGGEGSRGKAGTKLFQDFQMLSRIWTHPWCLQLDYI
SKENKGYFDEDSLDEFIATDTEESSMSASSDEESKKPKPKGKKGKKESSSSSETGSENDV
EVIKVWNSRSRGGGDGTTEEGANNNIPVKLEETKATSSTPESPTADWYKEFVTEADAEVL
AHSGKITLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLEVSNRAKLEGKPDFYKGEGK
WIRNIDYYRLDGSTSAQTRKKWAEDFNDVTNIRGRLFIISTRAGSLGINLVAANRVIIFD
ASWNPSYDIQSIFRVYRFGQHKPVFVYRFLAQGTMEEKIYERQVAKQSLSFRVVDQQQIE
RHFTMNELTELYSFEPDLLDDPNLDKKKKRDTPMLPKDTVLAELLQEMKEYIVTYHEHDS
LLDHKEEEELSEEDRKAAWAEYEAEKKGLTNRLSMSAGINYTQSNYPSQVPYMPLNLGAL
SALTNSQLEDLINQGREKVVEATNNITSVRMQPLDDIISVLRKDNPSLTDTEIRNLAINR
QTNLEIEIQRREQIYNDVLSKQQMLISCVQRILMSRRLQHQYTQQQQQMAFQQAALSRFM
GPKPPTMMMNPSSFQQIDMRGMYQQGIMQPPTLQRAPNSMRSKNPGPSQGN
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagagcccatgagtgaaagcaagttgaacaaattggtgcagaagcttcatgaa
tttttagctcactcatcagaagaatcagaggacgctaattctcctacaggacgttcagtg
agcaaagtttcagttttaaacaagtctacaaagctgtgtccagttgaaaacatggaagag
ggaagtagttcctctgagaaatccaagtctgtgttgtcttctagatcaaagcgaaaacca
tcatttgttacaaaatatgttgaatcaggtgatgagcagacagaggaaattcccccagaa
gatgagtccaatgaaaattcagaaaatgaggttgatatggatagattaccaaaaggtact
gtggtggtccaaccggagccagtgctgaacgaagataaggatgatttcaaaggaccggaa
tttcgaagtagaactaaaattaaaatggaaatcccaaagaaacgaggagaagaaggcttg
caaggaattgttaactgttcagcttgtgggcagcaagtaaatcattttcaaaaggattca
gtgtgtagacatccagctttaaaggtgctcatatgtaaggcctgttacaagttttatatg
agtgatgatatcaatcgtgatgctgatggcatggatgaacagtgcagatggtgtgctgaa
ggggggaaccttatttgctgtgactattgccataatgcattttgcaaaaaatgtatcttg
cgcaaccttggccggaaggaactctctgctataatggatgaaactacgaagtggaagtgt
tacatttgctctccagagccattggtggacctcatacgttactgtgacagtgtgactgaa
aacttggaacagtttttgcaacaaaataagaaaaagataaaggttgaacttgatggtaaa
atgcctgaccaaatgcataagcgtcccgaaaagtccaattccagttgtaatggaccggac
cggttagataattcatgcactagttcatttacctattcgtataaagcactaatggtccca
aaggaactgctgaaaaaagtgaaaaaactagttgaaactacagcaaatttaaatgctagt
tttgttagatttataagtcagaaaaatgataattctaacctaaccccaaatgttaagatg
agacaattaaaagcttttaaatctgttctccatgacttgaaaaaagcccacgttgccttg
gatgaaagtcttaactgtgagatccatgatttggagagtaaagctaaaaataaaaatgcc
aaagaaaatcatcttgaaaacaataaatataaaagaaaggaaaaaactgttggcaaggtg
gaccgaatgctggaaaaaaaatcaaataaggtgacaaccttgatagagaatgtggacgaa
ggtgagaaatctgatatagaagaggaacaaattgagaagtctgatgaagttataaaacat
atgattatagcagatgaaaattctgatcagatgtacatggacacagcagaggagaagttg
gttaaaacgtctgaccagattggggaaaaaacggataagtacaacctggagggaaagggg
gagaaaactatagatgaggacaagggggagaagtctgaggacaggagggctataaagctg
ggcagacagaaagctgagaaaaatgatggaagagataagggggcaagaagggtagattgg
agccaagagggaaagcctggaaataaagactttgatagtggggatgataggcgtgaggat
gagcccactggtgaacttcatggaggaggtgatacacctgaggatggagacaaagaagtt
aaaggtgacttagagcaagaatctgaagttagtggcacgttagttgagggtgaacaaatt
ggtgacaaaccacttgaaacaaacagtagcctgcttacgattgaaaattgtgaacttgag
gctaaagatggtgaggcactgaagaccgaagatgatgaagtaggagatgttgaccgtgaa
gtatttgagtgcggtatcaaagcagataaaagtaaaaactataagaaggaaaacctaagt
gatgagaatgataagcaggaaagcaaaagacttaatgaaaaaataagaaaaaaagtatcc
gattctaaagaaaaacatgacagaattaaaactgatgaagagatgagcaagacgactaaa
aataattgcagcgattccaaaaagttcataaattctaagaatcaacatggagacaaaaag
tctaataaggataaccattttgaaaatagtgatcctgaggcatttgatagcgacattctt
tcggttccgacttctgtccctgttgacattcttgaaaacatgtgctctacagctgtggca
aatgcaaccagtgatgagaagaacaacgtcctaacaagtcctgttacgtcttctccttca
aagcccattttaacacctataaaagatattgatgaaaaggcaaaaggagtaagatcattg
ctggtgaaaataaatcctctttcactttctggatctcttataaaacacaaaaaaaatagt
ggaaagggagaaattgaagaagttgaaagtgatatggccacaaaagaggatagtgctcaa
gataaagttaatgattgcataacggaaaagaagcccattttattgaaagatgaatctgat
cttagaagatctccacgtgtgaagacaactccaagaagacggcccactgatggacattcc
ttagccaattctggaggagagagcagtggaacagaccctaaagttaagcagaaatcaaaa
aagctccagaagcaaaaagtaaatgctgctgagcagagttcttcagacagtgacgggact
tctctgctcaaaaagagtctgtctgtaaaagctgggaacaaagcaagaaaaaacaaaagt
tgttctgattctgatgaagaaatgccagaagtcctgaagctggcagcacaaatgagtcct
agttcatcagacctggatagcacaaatgaaacatttaagtctgcaaatagctttaaggat
ccaaaaaaggccttgataagtgataaaggaaagcgaaaaagaaaaagctcaagttctgat
tccgatagtccatgcaggcagaccagggtcaccagaaattcagcatctaagaaacgaaag
agccgtccagagtcttcaaaatgtgattatgaatccgaaaaagatttgagtaaattggaa
tctaaaaacaaaaggaaaaagtccaggtctgacgaagacagtgaagagacccaaaaaaat
caaaaaaggagcccaaaattgcctaataggaaaggtgatggaaaaggcacagttttggcg
atacaagatatctcttcatcttctgacatcgaagacgatgaccaggatgctgatcaaaat
tcagtgggcgatcgaagcagtgatgagcagaaaattatgccagtgacggaaaatgtattg
atgtcttcagctgcaggattttgtcagtcttcaggagatgaagccaaatcggggcctatt
gccttggatgacgatgatgatgacgatgaccccgagaatagaattgccaagaaaatgttg
ttggaagaaatcaaagccaatctatcctcagatgatgatgaagacgattcttcagatgaa
gaatcaaacaatggaaaaaagaaagctgggaaggagaaagccaaagacgttgaggaagac
gctggatccacctctgattccgactctgactctgaattagataagaagccaagatacagg
cataagttactgagaaaaaagttaagcttgaacgaaggtgaatctggagaagaaagcaag
tctgataaggataagggtaaaaaagacaagtctaaggacgtaaaagatagaaaacccagg
actcgtcgaaaagtcaacagtgatgattcgaatgattcagatttcaaaaaatctcgtgac
agtgcagcagccagtgaaagtggcattagtgaagaagtgagtgacagtgattcggatcaa
agacccaggacaagggctgcaaaaaaagaagcagaagaaaatcgaagttataaacagaag
caaaagaagaaaagacgacgaataaaggttcaagatgactccagtgaaagcaagaacaat
tctgaagatggcgaaggcgatgaagatggtgaggatgattcagattccaaatcccctggg
aaggctaggaagaaaatcagaaagattcttaaggtggagaaactaagaacagagactcaa
aacgcattgaaggaagaggaggaaagacgaaaacgtattgcggaaagagaacgtgaaagg
gaaaaactgagagaggttgttgttgtagaagatgcttccccagtgaaatgccccataaca
acaaagctgatattggatgaagatccggaaaccaaggaaccattagttcaagttcacaga
cacatggttactaagctgaaacctcatcaagtggatggtgtccagttcatgtgggactgt
tgttgcgaatctctaaagaaaacaaaaaaagagtctggctctggatgcattcttgcacat
tgcatgggtcttggaaagactttgcaagttgttgcttttcttcacacagttttgctttgt
gagaatctggattttagtaccgctctagttgtgtgtccattgaatactgctttgaactgg
ttaaatgagtttgaaaaatggcaggaaggcttggcagatgatgagtctctacaggtcaat
gaacttgctacaattaagcgtcctcaagaaagaggagatatcctgaagacatggcatgaa
gagggtggtattattatcataggctacgagatgtaccgaaatctaacacaggggaagaat
gtgaagagtaaaaaattaaaagaaatataccacaggacgctggttgatccaggtccagac
tttgttatttgcgatgaaggacacattttaaaaaatgaagcttctgctatttcaaaagcc
atgaattcagtacagacaaggagaagaattatcctcacaggaacaccacttcaaaataat
ctcatagaatatcactgcatggttaacttcattaaggaaaatttacttggttctgtaaag
gagttcagaaatcgtttcataaatccaatccagaatggccagtgcgctgattctacaatg
gtagacgtccgggtgatgaagaaacgtgctcatatcctgtacgagatgttagctggctgc
gttcagagacgagattacacagcgcttacaaagtttctgccaccaaaatatgagtatgtt
ctagctgttagactatctccaattcaatgtaaactttatagatattacttggatcacttg
acaggtgcaaattttggtggcgaaggttcacgaggtaaagcgggaaccaagctcttccaa
gatttccagatgttgagcagaatttggactcacccatggtgtctgcagctggactacatt
agcaaagaaaataagggttattttgatgaagacagtcttgatgaattcattgctacagat
acagaggaatcgtcaatgagtgctagctctgatgaagagtccaagaaaccaaaaccaaaa
gggaaaaaaggaaagaaagaaagtagcagttcaagtgagaccggcagtgaaaatgacgtg
gaggtgatcaaagtctggaactcacgatcacgaggtggtggggacggaactacagaagag
ggagcaaacaacaacatacctgtaaagttagaagaaacaaaagcaacctcttccactcct
gaaagcccaactgcagactggtacaaagagtttgtcactgaagcagatgcagaagtccta
gcgcattctggaaaaataacacttctttttgaaattcttcgcatggctgaggaacttggt
gataaagtccttgttttcagccagtcattgatatcattagatttaatagaagattttctt
gaagtgtcaaacagagcaaaattagaggggaaacctgacttttataaaggggaaggaaag
tggatcaggaatattgattattatcgcttagatggttccacttcagcacagacgagaaag
aaatgggcagaagactttaatgatgttacaaacattcgaggccgattgtttattatttcc
actagagcaggatcccttggaattaatttggtagctgcaaaccgtgtgattatctttgat
gcctcttggaacccatcctatgatattcagagtatctttagggtgtatcgatttgggcag
cataaaccagtctttgtatacaggttcttggctcagggaaccatggaagagaaaatctat
gaacgtcaggtagccaaacaatctttatcctttcgcgtggtggaccaacagcagattgag
cgacattttacgatgaatgagttgacagagctatacagctttgagcctgatttattagat
gatcctaatttagacaaaaagaaaaagcgagatacacctatgttgccaaaggacactgtt
ctggcagagctgcttcaggaaatgaaggagtatattgttacctatcatgagcacgattct
ctgcttgaccacaaagaggaggaggagctatccgaggaagacaggaaggcagcttgggca
gaatatgaagcagaaaagaagggtttgaccaatcgcttgagcatgtccgctggcattaat
tatacccaaagcaattacccttctcaagtcccttacatgcctttaaaccttggcgcactg
tctgctttgacaaattcacagcttgaggatctcattaaccaaggtagagagaaagtggtg
gaagccaccaacaatataacatcagtgagaatgcagcctcttgatgatatcatttcagtt
ttgagaaaagataatcccagtttgacggatacagaaattcgtaatttggcaataaacaga
cagacaaatctagagatagaaatacaacggagagaacaaatttacaatgatgtcttatca
aaacagcagatgttgatcagttgcgttcagcgaatacttatgagcagacgacttcagcat
caatacacccaacagcagcagcaaatggctttccagcaagcagcactgagccgcttcatg
ggccccaagcctccaactatgatgatgaacccttcatcatttcaacagattgatatgaga
ggaatgtatcaacagggcatcatgcaaccacctactctgcagcgtgccccaaactcaatg
agaagcaaaaatccaggtccttcacagggaaactaa
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integrated database retrieval system
