Pleurodeles waltl (Iberian ribbed newt): 138262014
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Entry
138262014 CDS
T10800
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138262014 (VPS50)
Membrane trafficking [BR:
pwl04131
]
Protein recycling
Others
EARP complex
138262014 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
138262014
NCBI-ProteinID:
XP_069067762
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Position
10:900675728..901556035
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AA seq
958 aa
AA seq
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MLRGLGQKRLLKRSSKPEEAQNSSESSVEELRELREQPSDPQAEQELINSIEEVYFSNDS
FDMVKYELEKLPPVLTLQELEEYRDKLKKQQAAVSKKVADLILEKQPSYVKELERVTSLQ
TSLQLAAVICTNGRRHLNVAKKGFTEASLGLLANQRKRQLLTGLLKSLRTIKTLQRTDVR
MSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICK
NFDVNHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQK
LQYKDLCTHITSDSYIPCLGDLCKALWEVMLSYYRTMEWHEKHDSGETTPVSDGNNVIGT
EETAFDRNYVKKKLEHGLTRIWQDVQLKVKTYLLGTDMSIFKYDDFIFVLDIISRLMQVG
EEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKYNFSILQLHEF
KFLGHSRSPSVSPNKQTSAASSTVLSLFEQYCDDGNPFEIQVDNKDDETEDVLASNGYES
DELEKSAYQEYDSDSDIAEELKRDFVDEQTGDVPVKSMSRETLRSRKRSDYSLNRVNAPI
LTNTTLNVIRLVGKYMQMMTILKPIAFDVIHCMSQLFDYYLYAVYTFFGRNDAFESTGLG
LSSSRLRTTLNRIQESLIDVEVSVDITSTHTTSEERKEKVPSPHLSPLVVLTSSGTLYGL
AERVVATESLVFLAEQFEFLQSHLDSVMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAA
RAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEQFNKRLNDVSRQVRIPLPVSNI
LWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETY
IKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDVDRPKR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggggactaggccagaagcgcctcctgaagcgaagctcgaaaccagaagaagcc
caaaactcctccgagtcctctgtggaagaactccgagaactgcgagaacaaccttctgat
cctcaagcagaacaagaactaatcaacagcattgaggaagtttatttttctaacgactcc
tttgatatggtcaaatatgaacttgagaaacttccccctgtacttactctgcaagaatta
gaagaatatagagacaaattaaagaaacaacaagctgcggtatcaaaaaaagtggcagac
ctcattctggaaaagcagccttcttatgtaaaggaacttgaaagagttacatcgctgcag
accagtctccagctagctgctgtcatatgcacaaatggaaggaggcacttgaatgttgca
aagaaagggtttacagaagcaagtctgggtctcctggccaatcaaagaaagagacagctg
ctgactgggctgttgaagtccttgaggactataaaaactctgcaaagaactgatgtacgc
atgagtgaaatgttagaggaagaggattatcctggagctatacaactctgcttggaatgc
caaaaggcagccagcacattcaaacactatagttgcataagtgaattgaactcaaagctg
caagatactttggaacaaatagaggaacagctagatgtagctctctccaaaatctgcaaa
aattttgatgtcaatcactacactaaagttcaacaggcatatcgactccttggaaagact
cagactgcaatggaccaacttcatatgcacttcacccaggctattcacaacactgtattc
caggttgtgcttgggtatgtggagctctgcgcaggaaacactgacaccaaatttcagaag
ctacagtacaaggacctctgcacacatattacatcagacagctacattccatgccttggt
gacttgtgtaaagcactctgggaagtcatgcttagttattatagaaccatggagtggcat
gaaaagcatgacagcggagaaaccactccagtttcagacggcaataacgtgattggcact
gaagaaacagcttttgatcgtaactatgtaaaaaagaaattagaacatggactcactcgt
atctggcaggatgttcagttaaaagttaaaacatatctgctaggaactgacatgtctatc
ttcaagtatgatgacttcatttttgtgctggatataatcagcagattgatgcaagttggt
gaagaattttgtggcagcaaatcagaagtcctacaagaatccatcagaaagcagagtgta
aactattttaaaaattatcacagaacccgacttgaagagctccgaatgttcctggaaaat
gaaacttgggagctttgcccagtgaaatataacttcagcattttgcaattgcatgagttc
aaatttttgggccattcacggtccccctcagtatcgcccaataagcagacttctgcagca
tcttcaacagtattgtcgttgtttgagcagtattgtgatgatggaaacccatttgaaatt
caagttgacaacaaggacgacgagacagaggatgtactagcctcaaatgggtatgaatca
gatgaattggaaaagagtgcatatcaggaatatgacagtgatagtgacattgctgaagaa
ctgaagcgagattttgtggatgagcagacgggagacgtgcccgttaagagcatgtctcgt
gaaactttaagaagcaggaaaaggtcagactacagcctgaacagggtgaatgcacccatc
ctaaccaacactaccctcaatgtaatacgacttgttggaaaatacatgcaaatgatgact
attctcaagccgatagcattcgatgtcattcactgtatgtctcaactatttgattactat
ttgtatgctgtgtatacgtttttcggtcgaaatgatgcgtttgaatcaactggcctcggc
cttagcagcagcaggctgagaaccaccttgaacagaatacaagagagtctgattgatgtg
gaagtatcagttgatatcaccagcactcatactacttctgaggaaagaaaggaaaaagtg
ccaagccctcacctcagtcctttggtggtcttgacttcaagtggaactttgtacggtctt
gctgaaagggttgttgctactgaatccttggtttttctagctgagcagtttgaatttctc
cagtcacatcttgattcagtaatgcctgcagcaaagaaacccttccttcaacagttctac
tcacagacagtatcaactgccagtgaacttcgtaaaccaatttactggattgtcgcggct
agagctattgactatgaacagatgctgctccttatggcaaatgtgaaatgggacgtgaaa
gaaatcatgtcccagcataatgtgtatgtggatgcccttttgaaggaatttgaacagttt
aacaaaaggttaaatgatgtgtcccgacaagtgcgaattcctttgccagtatcgaatatt
ctttgggagcactgcatccgactggccaacagaacaattgtggaaggctatgctaacgtc
aagaagtgcagcaacgagggacgagctttaatgcagctggattttcagcaatttttaatg
aagctggagaaactcacggacatcaggccaatcccagataaggaattcgtggaaacatac
attaaagcctactatctcaccgagaatgatatggaacgctggatcaaagagcacagggag
tactctacgaaacagctaaccaacctggtgaatgtgtgcctagggtctcacattaacaaa
aaggcaagacagaaattgttagcagctattgatgacgtggacagacccaagagataa
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