Pleurodeles waltl (Iberian ribbed newt): 138262034
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Entry
138262034 CDS
T10800
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pwl04990
]
138262034 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
pwl04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
138262034 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
138262034
NCBI-ProteinID:
XP_069067802
LinkDB
All DBs
Position
10:928753957..929341847
Genome browser
AA seq
965 aa
AA seq
DB search
MASLSIWGWGFLGGVLFLITFGPFAIFYLAFYILCFVIGGFVIALLFGKTNSEKYLETCE
HSFLPSTPIGVPMCLEEMKREARPIKIDRRLTGANVIDEPLQQVIQFSLRDYVQYWYYTL
SEDETFLLEIRQTVQNALIRFSTRSKEIDWQPYFTTRLVDDFATHLRVFRKSQQKMQEMD
EQKKDPSEFVDTFFEVEVEMEKEVCRDLVCTSHKDEEGFLKDLCEILLYLLLPPGDFQNK
IMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDHVGELE
AVRDKASEELQYLRSLDTVGDDINTIKNQINSVLFVKKICETRIQRLQSGKEIDAVKLAA
QFGKLCTVPLDIILVDNVALQSFMDYMQQNGGQAHLFFWLTVEGYRVTAQQQLEVLQNFQ
RDGKHQTNQTKGLLRAAAVGIYDQYLSEKASPRVDVEEYLVAKLEDKLENEDPTPEIFDD
IQRKVYDMMLRDEQFYPSFKRHHLYIRMLAELDMLKEPSFRGSDDGDGESFNGSPTGSIN
LSLDDLSNVTSDELVQLHAYISETVYADCDPYAVAGVCNDHGKTYALYAITVHRRTIDGM
EETWKTYRRYSDFHDFHMRITEQFENLGSILKLPGKKTFNNMDREFLEKRKKDLNSYLQI
LLNAEMVKACPDIAQCVYNFLENKAYNKGKGDFARKMDTFVNPLRNSMRNVSNVVKAIPD
SLAEGMTKVSDNMGKMSERLGQDLKQSFFKVPPLIPKVDIDPEHCRVSAQLDDNVDDNIP
LRVMLLLMDEVFDVKERNQWLRMNIKNLLQRLIRATYGDTINRKIVDHVEWMTSPEQVAD
YVKHFRDSFWPNGILAESVPRRDKAIRMRTRMAGKTKLLEIMPDELKHIIGAETTRKGIL
RVFEMFQYNQLNRRLVYVFLEGFLETLFPQFKFRELFNKLHSRSKRMQKFKQRLQSSQAP
SSQKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggccagtctttccatatggggatggggatttcttggtggcgttctgtttcttataacg
tttggaccctttgcaatattttacttggccttttatattctctgctttgtgatcggaggc
tttgtgattgctcttttatttggaaagacgaattcggaaaagtaccttgaaacgtgcgag
cactcctttcttccatctacacccattggagttcctatgtgtttagaagaaatgaaacgg
gaagctagacctataaagatcgacagaagactgactggtgccaatgtgattgatgaacct
ttacaacaagtaatccagttttccctgagagattatgttcagtattggtattacacatta
agtgaagatgaaacctttctccttgaaatcaggcaaactgttcaaaatgcactaattcgg
ttttctacaaggtcaaaagaaatagattggcagccttattttactacacgtcttgtggat
gactttgctacacatctcagagttttcagaaaatctcagcaaaaaatgcaagaaatggat
gagcaaaaaaaggatccatcggaatttgtggataccttttttgaagttgaagttgaaatg
gaaaaggaggtttgccgtgatctggtttgcacttctcacaaagatgaagaagggttcctg
aaagatctgtgtgagatactactgtacttacttctacctcctggagacttccagaacaag
atcatgcgatacttcgttagggaaatcctttcacggggaattcttcttccattaattaat
caactaagtgaccctgattatattaatcagtatgtcatctggatgattcgtgattctaat
tgcaactatgaggcctttatgaacatcattaaattgagcgaccatgtgggagagctggaa
gctgtgagggataaagcgtctgaggaactgcagtatcttcgttctttagatacagtgggt
gatgatatcaacactataaagaatcaaataaacagtgtactgtttgtaaagaaaatatgt
gaaacaagaatacagaggttgcagtcaggaaaagaaatagatgctgtgaagctggcagca
caatttggaaaactttgcacagtccccttggatatcatccttgtagacaacgttgcactt
cagtcttttatggattacatgcagcagaatggaggccaagctcatctcttcttctggctg
acggtggaggggtaccgggtaactgcgcaacagcagctggaggtgctgcagaattttcaa
agagatggaaaacaccaaaccaatcaaaccaaaggccttttacgagcagctgctgttgga
atctatgatcagtatttatctgagaaggcatcaccaagagttgacgttgaagaatacttg
gtagctaaactggaagacaagttggagaatgaagacccaacgcctgaaatatttgatgac
atacagagaaaggtatatgatatgatgttgcgggatgaacagttctacccttcattcaag
cgccatcatctttatatccgaatgcttgctgagcttgacatgttgaaggagccgagcttt
agaggatccgatgatggcgatggagaatctttcaacgggtcccccacaggcagcatcaat
ttgtctctagatgacctttcaaatgtcacttccgatgagctggtgcagcttcatgcatat
atttcagaaactgtctatgctgactgtgacccatatgctgtggcaggagtgtgtaatgat
catggcaagacatatgcactgtatgcgatcacagtacatcggcggaccatagatggcatg
gaagaaacatggaagacatatcgccgctacagtgactttcatgactttcacatgcggatc
actgagcagtttgaaaaccttggcagtatattaaagttacctgggaaaaagacatttaac
aacatggatcgagaatttttggaaaaaagaaagaaagatttaaattcatatttacagata
ttactgaatgccgagatggtgaaagcctgtccagatatagctcagtgtgtatataacttc
cttgagaacaaagcatataacaaaggaaaaggggattttgcccggaagatggatacattt
gtaaaccctctacgcaactctatgaggaatgtttcaaatgtagtcaaggccattccagac
agcctcgccgaaggaatgactaaagtatcagacaatatgggcaaaatgtctgagagattg
gggcaagatttaaagcaatcctttttcaaggttccaccattaataccaaaggttgacata
gatcccgaacactgtcgtgtctcagctcagctggatgacaacgtagatgataatattcct
ctcagagttatgctgcttctcatggatgaagtttttgatgtgaaagaaagaaatcagtgg
ctaagaatgaacatcaaaaaccttctgcaacgacttataagagcaacatacggtgacacg
atcaacagaaaaattgttgaccatgtagagtggatgacatcgcctgaacaagtagcagat
tatgtgaagcacttcagagattccttttggccaaatggtattttagccgagtcggttcca
cgaagagacaaagcaattagaatgagaactagaatggctgggaaaacaaaactgttggaa
ataatgcctgatgaactaaaacacatcatcggtgctgaaacaacaaggaaagggatcctg
cgggttttcgagatgtttcaatacaaccaattaaataggagactggtatatgtctttttg
gaaggcttcctagaaaccttatttccccagtttaaatttcgtgagctatttaacaaactt
cattcaaggtcaaaacgaatgcagaaatttaaacagagactacagtcttctcaagcgcct
tcttcccagaaaaggtga
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