Pleurodeles waltl (Iberian ribbed newt): 138262211
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Entry
138262211 CDS
T10800
Symbol
CUL4B
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03420
Nucleotide excision repair
pwl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138262211 (CUL4B)
09124 Replication and repair
03420 Nucleotide excision repair
138262211 (CUL4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138262211 (CUL4B)
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138262211 (CUL4B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwl04147
]
138262211 (CUL4B)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
138262211 (CUL4B)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
138262211 (CUL4B)
TCR (transcription coupled repair) factors
Cul4-CSA complex
138262211 (CUL4B)
Exosome [BR:
pwl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138262211 (CUL4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
138262211
NCBI-ProteinID:
XP_069068159
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Position
2_1:179405557..179986628
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AA seq
850 aa
AA seq
DB search
MKEPGQSTSGLSTPHPPVPEVRPEASGASKKRKLNNSSDKEECDPLSSPRHTGSSGPQAN
HIQKRLRFEDSLDFIGLDVKMAEESSVASSSCAAQQLKSKSLLLSPGGHHANGLTKSATV
SSFASSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQA
VENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMI
RSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAI
DRSLLRSLLSMLSDLQIYQDSFEHKFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEE
EADRVITYLDQSTQKPLIATVEKQLLGEHLTSILQKGLNHLLDENRIQDLSLLYQLFSRV
RGGVQVLLQHWIEYIKAFGSTIVINPEKDRTMVQELLDFKDKVDHVIDVCFLKNEKFVNA
MKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVF
EAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQFK
QYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPAEMVKLQEIFKTFYLGKHSGRKLQW
QSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATGIEDGELRRTLQ
SLACGKARVLTKTPKSKDIEDGDKFTCNDDFKHKLFRIKINQIQMKETVEEQASTTERVF
QDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDK
ENPNQYNYVA
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccgggccagagcacttccggtctctctaccccgcaccccccagtaccggag
gtccggcctgaggccagcggcgcctctaagaagaggaagctcaacaacagtagtgacaag
gaagagtgcgatcccctctcgtcaccgcgacacaccggatcatccggaccccaagcaaac
cacatccagaagcggctacgctttgaggattcgctggactttatcggactcgatgtgaag
atggcagaagagtcttctgtcgcctcctcgtcatgcgccgcccagcagctaaagagcaag
agccttctcctctcccccggtgggcaccatgccaatggcctcaccaagtccgcaacggtc
tccagcttcgccagcagcaagcccggatctgccaagaagctggtgataaagaacttcaaa
gataaaccaaaattgcctgaaaattacacagatgaaacgtggcaaaaactgaaagaagca
gttgaagcgattcagaacagcacgtcaattaaatataatttagaggaactataccaggca
gtagaaaacctctgttcctataagatttctgcaaacctctacaaacagttgcggcagatt
tgtgaagaccacattaaagcacaaattcaccagttcagagaggattccttagatagcgtt
ctctttctaaagaaaatagacaaatgctggcaggatcattgccgacaaatgatcatgatt
aggagtatatttttatttttggaccggacatatgttcttcagaattcaatgctgccatcg
atttgggatatgggactggagttgtttagagcgcatataattagtgaccagaaggtgcag
aataagacaattgatggaattctgttgttaattgagagggaaaggaatggagaggcaatt
gacaggagcttgctccgaagccttcttagtatgctttccgatttacaaatttatcaagat
tcatttgaacataaattcttggaagagacaaatcgattgtatgctgcagagggtcagagg
ttaatgcaagaacgagaggttccggagtatcttcatcatgttaacaagcgcttggaagaa
gaagcagacagggttatcacctatttagatcaaagtacacaaaagccgctaattgcaact
gtagaaaaacagctccttggtgaacatttaacatcaattctgcagaaaggtttaaatcat
cttttagatgaaaatagaatacaagacttgtctttgctgtatcagttattcagcagggtc
agaggtggtgtacaggtcctgctgcagcattggattgaatacatcaaggcatttggcagt
actattgtaattaaccctgaaaaggataggaccatggttcaagagctgctggatttcaag
gataaggtggaccatgttattgatgtatgcttcctgaagaatgaaaaatttgtcaatgct
atgaaggaagcttttgaaaccttcattaacaaaagaccaaataagcctgctgaattgatt
gccaagcatgtggattcaaagctgcgtgcaggcaacaaagaagctactgatgaagaactt
gaaaaaatgttagataaaattatgatcatatttagatttatttatggaaaggatgtattt
gaagcgttctacaaaaaggatttagctaagcgactcttggttggcaaaagtgcatctgta
gatgctgaaaaatctatgctttccaaacttaaacatgaatgtggagctgctttcaccagc
aagcttgaagggatgtttaaagacatggagctctctaaagacataatggtgcagtttaaa
cagtatatgcaaaaccagaatgttccggggaacattgagctaacagtaaatattcttact
atgggttattggccaacctatgtgcctatggaagtccatctacctgcagagatggtaaaa
ctccaggagatttttaagaccttctatctaggaaagcacagtggtagaaagctccaatgg
cagtcaacattgggacactgtgtattgaaagcagagtttaaagaggggaaaaaggagctt
caggtgtctctgttccaaacattggtgcttcttatgtttaatgaaggagaggagttcact
ttagaggagataaaactggctacagggatagaggatggagagctaagaagaacgctgcaa
tctttagcatgtggcaaagccagagtgttaacgaaaacgcctaaaagtaaggatattgaa
gatggagataaattcacctgcaatgacgatttcaaacataagctcttcaggataaaaatc
aatcaaatccagatgaaagaaacggtggaagaacaggcaagcactacagaaagagtattc
caggatcggcaatatcaaattgatgctgcaattgttcgaatcatgaaaatgaggaaaaca
cttagccacaatcttcttgtatccgaggtgtataaccagcttaaatttccagttaagcct
gccgatcttaagaagcgaatagagtccctaatcgacagagactacatggagagagacaaa
gagaatccgaaccagtacaactatgttgcttaa
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