Pleurodeles waltl (Iberian ribbed newt): 138262456
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Entry
138262456 CDS
T10800
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138262456
03037 Cilium and associated proteins [BR:
pwl03037
]
138262456
Transporters [BR:
pwl02000
]
Other transporters
Pores ion channels [TC:
1
]
138262456
Cilium and associated proteins [BR:
pwl03037
]
Other cilia and associated proteins
Stereociliary proteins
138262456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
RVT_1
Arc_capsid_dom
Mvb12
Motif
Other DBs
NCBI-GeneID:
138262456
NCBI-ProteinID:
XP_069068451
LinkDB
All DBs
Position
10:complement(813496082..813965444)
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AA seq
1395 aa
AA seq
DB search
MIPTESDAGSEEDEISMTEEEMEKLKEHVEEKKKLIATIRNKPWRMKKKLSLLRDSQAFV
EKFEGALGKGKGKKFYAYKVMMMKKWIKFKRDFDNFRTACIPWEMKIKEVESHFGSSVAS
YFIFLRWMYGVNLVLFGLIFGLVVIPEILMGMPYGSMPRKTVPRSEEKTAMDFSVLWDFE
GYAKYSALFYGYYNNQRMIGWLQYRLPLSYFLVGVSVFGYSLMVVIRTMAGNANESTGEG
DDGNYNFSFKMFTSWDYLIGNPETADNKFASITTSFKESIVDEEESHKDENIHLTRFLRV
LANVLIICCLCGSGYLIYFVVKRSQTFSKMENVGWYERNEVEIVMSLLGMFCPPLFETIA
NMEEYHPRVALKWQLGRIFALFLGNLYTFLLALMDDVNEKLEQEVAIRNVTYWTLYNYYN
SSGNGSDSTVPPMHPADVPRGPCWETNVGVEFVRLTVSDILVTYVTILVGDFLRACFVRF
VNYCWCWDLEAGFPSYAEFDISGNVLGLIFNQGMIWMGSFYAPGLIGINVLRLLTSMYFQ
CWAVMSSNVPHERVFKASKSNNFYMGLLLLILFLSLLPVAYTIMSLPPSFDCGPFSGNNR
MFDVIEETMEKDFPPFIGKIISSAANPGLIIPAILLMVLAIYYLNAVSKAFEQANLDLRK
KMQMQREEEKNKRNNNTEANSIMKELEDLLPPQARMALHQQSSEAVANTSDPPPPSHNKL
LLSQTHVSDDDTTKVMNTIHSGSPSDPGPHHTFNKASSIIAPPQLGMISNSSFETVTFPE
IWKHTEINALLKKPKADPKDLKNYWHISLLPFPAKVIEKIVNSQLTHLLEENNTLDPSQP
GFRSNHSTKIALITDTDGIRTLLDKGETAALILLDLSAAFDTACHHTLCIPHHDTGICNK
TLDWTTSFLTGRTQRVRLPPFRSEATKTICGVPQPDPLQHDAVLLARTEISTHRLLKGFE
SFCALRNMVINEGKTKFMILNLKQKIQVTFKINKKSLDQVVTYEYLGSVTKTSAYVRDSM
DIINKLENLTYEESNQLLVTFEIESLYTNIPQDEAIEIIKKTLNSNTQPHTPPTEFLVEL
ATLCLKNNFFKYNDQLYRQVKGVAMGCSFAPEIANLVMDYFEQKWVYPQINPFRKHINHW
FRYIDDIMMVWQGTDDTLEAFHDWLNHRTVDFKFTMSRDKAKINFLDLWIWNKNGKLAVS
LYKKPTDRNTLLHFSSGHPRTLKQNLPYGQFLRIRRNCTEKNDYFENAEELTKKLIDRVY
PRKLVKNAAKRAWFTPRETLLVPKEKIKGVPLTCVITFSPKANKIRSIIERNWKIISELN
IDKPLFSFKKARSLKDQWVKALRWALLFETPARLQRVTSRSNDSHTEDALRIRLADLAGI
FSTRRTRTMIALLQS
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgatccccacagagtctgatgcgggatctgaagaggatgagatttccatgactgaggag
gaaatggaaaaactgaaggaacatgtggaagaaaagaagaaactaatagcgaccataagg
aacaaaccttggcgtatgaagaagaagctgtcactcttacgggattcacaagctttcgtt
gaaaaatttgaaggagcccttggcaagggaaaaggcaagaaattctatgcttacaaagtg
atgatgatgaagaaatggatcaaattcaaaagagactttgacaattttagaactgcctgt
ataccttgggaaatgaaaataaaggaagttgaaagtcactttggttcatctgtagcctcg
tatttcatatttctcagatggatgtatggcgtgaacctggttctgtttggtctaatattt
gggctggtcgtaatccctgagatcttgatgggaatgccatatggaagtatgcctcggaag
actgtaccaagaagtgaagaaaaaactgccatggatttttcagtattgtgggattttgag
ggctatgctaaatattcagctctattttatggctattacaacaaccaacgcatgattggc
tggttacagtacagacttcctttatcatatttcttggtcggagttagcgtcttcgggtac
agcctgatggtggttataagaacaatggcaggtaatgccaatgaaagtacgggggaaggt
gatgatggaaattataatttcagctttaaaatgtttaccagttgggactatctaattggc
aatcctgaaactgcagacaacaaatttgcatcaatcacaaccagctttaaggagtctatt
gtagatgaagaagaaagccataaagacgagaacatccatctgacacgattcctgcgtgtt
ttggccaatgtgctcataatatgttgtttgtgcggaagtggctatctcatctacttcgtg
gtaaagcggtctcaaaccttttcgaaaatggaaaacgtgggatggtatgaaagaaatgag
gttgaaattgttatgtccttacttggcatgttttgccctccactctttgaaaccatcgcc
aatatggaggagtatcaccctcgggtagcattgaagtggcagcttggccgaatatttgct
ttatttctaggaaacctctacacctttcttcttgcccttatggacgatgtcaatgaaaag
ctggaacaggaagtagccattaggaatgttacctactggactctgtataactactacaac
tcgtcaggaaatggaagtgattctacagtgccccctatgcatcctgcagatgtgcctaga
ggaccatgctgggagacaaacgtaggagtggagtttgtcagactgacggtatcggatata
ctcgtgacctatgtaaccatacttgttggagatttcctgagggcttgtttcgtcagattt
gtgaattactgctggtgttgggacctcgaagctggatttccttcatatgcggagtttgat
attagtggaaacgttttggggttgatcttcaaccaaggaatgatatggatgggttctttt
tacgcacctgggcttattggaataaatgtactgcgtttgctaacatccatgtacttccaa
tgttgggcggtgatgagcagcaatgtcccccatgaacgtgtgttcaaagcatccaagtcc
aacaacttttatatgggtcttttactattaattctttttttaagccttctgcccgtggct
tacaccataatgtcacttccaccttcatttgactgcggaccattcagcggaaacaatcga
atgtttgatgttattgaagagacaatggagaaagactttccaccttttatcggaaagatc
atcagttccgcagcaaatcctgggctcataattccagcaattctgcttatggttcttgct
atttattatcttaatgctgtttcaaaagcattcgaacaagcaaacttggatctgaggaag
aaaatgcagatgcaacgtgaagaggaaaaaaacaaaaggaacaataacactgaagctaac
tctataatgaaagaattagaggatttgcttccaccgcaggcaagaatggctcttcaccag
cagtcaagtgaagcagtcgccaacacctcagacccaccgccccccagccacaacaaactc
ctgctctctcagacccatgtcagcgacgatgacaccaccaaagtcatgaacaccattcac
tccggctcaccatctgaccccggcccgcatcacaccttcaacaaagcgagctccatcatc
gcccccccccaactcgggatgatcagcaacagctccttcgagaccgtcaccttcccagaa
atctggaagcacaccgagatcaatgccttactgaagaaacccaaggcggacccaaaggac
ctaaaaaactattggcacatctccctgctcccgttcccagcaaaggtcatcgagaagatc
gtcaacagtcaactgacccaccttcttgaggaaaacaacactctggacccgtcccaaccc
ggttttcgcagcaaccacagcaccaagatcgccctcatcaccgacaccgatggcatcagg
accctgctagacaaaggcgaaaccgctgcccttatcctcctcgacctctcggccgccttt
gacaccgcctgccaccacaccctatgcataccccaccatgacacagggatctgcaacaaa
accctggactggaccacctccttcctcaccggcagaacccagagagtccgcctccctcct
ttccgatctgaagccactaagaccatatgcggcgtacctcagcccgaccctcttcaacat
gacgctgtactattggcaagaacggagatatcaacgcatcgtctactaaagggttttgaa
tcattttgtgccttgaggaacatggtgattaatgagggtaaaacaaagttcatgattctc
aatctaaaacagaagatccaagtgacctttaagataaacaaaaagtctctggaccaagtg
gtgacctatgaatacctaggctctgtaaccaaaacatcggcgtatgtaagagactcaatg
gatatcatcaacaagttagaaaatctaacatacgaagagagcaaccagcttttggttact
tttgaaattgagtcactgtacactaatatcccacaagatgaggcaattgagatcattaaa
aagactttgaatagtaatactcaaccccatacccctccgacagaattcttggtggagtta
gctacactttgtttgaaaaacaactttttcaaatataacgaccagctataccgccaagtt
aaaggcgtagcgatgggatgtagtttcgccccagagatcgctaacttggtgatggactac
tttgaacaaaaatgggtctatccacaaatcaatccttttaggaaacacattaatcattgg
ttccggtatattgatgatattatgatggtgtggcaagggacggatgacactctagaagca
tttcatgactggcttaatcaccgcacagttgattttaaatttactatgagcagagataaa
gccaaaatcaattttcttgatttatggatatggaacaaaaacggcaaattagcagtcagt
ctgtataaaaaacctacagatcgtaacaccctgctacatttttcaagcggacatccccgt
acacttaaacaaaatttaccttatggtcaatttttaagaattaggaggaattgtacagaa
aaaaatgattatttcgaaaatgcagaggaactgactaagaaacttattgatagagtatat
cctaggaaattggtaaaaaatgcagctaaaagagcgtggtttactccgagagaaacacta
ctggtcccgaaagaaaaaataaaaggtgtccccttaacttgtgtgatcacattcagccct
aaggcaaataaaatacggtccatcattgaacgtaattggaagattatcagcgagttgaat
atagacaaaccacttttttcgttcaagaaggcacgtagtttaaaagaccaatgggttaag
gcattgcggtgggccttgctatttgagacgccagcacgcttgcagcgcgtgacgtctcgt
agcaacgattcccacacggaagacgcgctcagaattagactcgccgacttggcaggaata
ttcagtacgcgccggacacgaactatgattgcccttctccagtcctga
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