Pleurodeles waltl (Iberian ribbed newt): 138262462
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Entry
138262462 CDS
T10800
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138262462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138262462
Transporters [BR:
pwl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
138262462
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Rad17
RsgA_GTPase
AAA_30
AAA_28
AAA_16
AAA_7
AAA_5
Zeta_toxin
AAA_29
G-alpha
AAA_15
PRK
SbcC_Walker_B
tRNA_lig_kinase
Sigma70_ner
CDC45
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
138262462
NCBI-ProteinID:
XP_069068459
LinkDB
All DBs
Position
10:complement(917108516..917679741)
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AA seq
1201 aa
AA seq
DB search
MDLFALAVPANSSECIGSPGIDLEGEMSRIAWYYSGVALAVLILSFFQVWFFFLAATRQT
ARIRRKFFYAILHQEMAWFDSSKTGTLNSRLTDDINTIRDGLGDKFSMFAQYLSTFVAGM
VIGFVYGWKLTLVILSVCPLLAASAAVWSKLLGSLAAKEMSAYAKAGAIAEEILSAIRTV
VAFNGQKKAVARYEVNLREARNAGMRKAFTTNLSMGISQFLTFSTYGLGLWYGTKLTVDE
PENYSIGHVMIIFFSVMMGSFQLGQTSPNLESIASSRVAAYGIYKVIKKKRLIDSSSTDG
HKPDRFTGRVEFKNIHFSYPTRPNTQILKGLNLTVEPGKTIALVGSSGCGKSTTIQLLQR
FYDPQQGEITLDGQDLRTLNVKWLREKIGVVSQEPILFGTTIAENIRYGREDVTDAEIQQ
AAKEANAYDFIANLPEKFNTMVGERGAQLSGGQKQRIAIARALARNPKILLLDEATSALD
TQSEAVVQEALDKARNGRTTILIAHRLSTVRTADVIAGFENGIVVEQGSHSELMEKKGIY
YSLVMQQSQKKDSDEEEVETEDETDDELGTFDDSIVKEKGERRKSIMSTFSKLSRRKSSI
KKMRSKKKRNNNPEDDLPRVPFTMVLRWNKPEWPYLISCVIASAIAGGISPTFSVMFGKI
IGAFQEIDGQKRLKVTNVVSLMFFILGIISLIVYLIIGYTIGRAGENLTMRLRLLSFKAL
LRQEIGWFDDRRNAVGILITRLSTDASQAKGATGGRLFIITLASCTMLTAIVIAFVYGWQ
LTLLIFGCIPVILAAFVIKTTSMSGHASKDQAALEEAGRISTEAVDNIRTVASLTREVAF
YERYTTSLKRPYRAAIKSGPVKGLVYGLAQSIQYFLNAAIFRFGAWLIVHCYMNFENMFI
VFSAIVFAAMSIGQASLLAPDFSKANLAVQRIAKLLDRKPQIDSYSEKGKVLDTFDGDVE
FKHARFVYPTRPKVKVLQGLNIQVKKGQTLALVGSSGCGKSTTIQLLERFYDPIGGHVFA
DGIDTRSLNLQWFRSQLGIVSQEPVLFDCSIAENIQYGDNSRNVSQEEIEEAAKAANIHS
FIETLPEKYSTPVGDKGTQLSGGQKQRIAIARALVRKPKVLLLDEATSALDTESEKVVQK
ALDDARLGRTCIVIAHRLSTIKNADVIAVIHHGSVVEQGTHSELLAKQGLYYDLVNAQVS
H
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtttgccttagctgtgccagcaaacagttccgaatgcattggttctcctgga
atagatcttgaaggagaaatgtcaaggattgcctggtattattctggagttgcacttgct
gtactcatattgagtttctttcaagtttggttctttttccttgctgcaacacgacaaaca
gccaggatccggcgcaagttcttctatgccatcctgcaccaggaaatggcctggtttgat
tcatctaaaactggaacactgaacagcagattaacagatgacatcaacaccattcgtgat
ggccttggtgacaaattttcaatgtttgcacagtatctttctacatttgtggcagggatg
gtcattggatttgtatacggctggaaattaacactagtgattttatcagtctgtccatta
cttgctgcatcagcagctgtgtggtcaaaactcctaggatcactggcagccaaggaaatg
tccgcatatgcaaaggcaggggcaatagccgaagaaattctgtctgcaataaggacagtt
gttgcctttaacggtcagaagaaagcagtggcaaggtatgaggttaacctacgggaggca
agaaacgctggcatgaggaaagcctttacaacaaatctatctatgggcatctctcaattt
cttacattttcaacctatggacttgggctttggtatggaacaaaattaactgtggatgaa
cctgagaactattcaatcggtcatgtgatgattatattcttttcggttatgatgggttca
ttccagcttggccaaacatccccaaatttggaaagtattgccagttctcgcgtggctgcc
tatggaatttacaaggttatcaaaaagaaacgtcttatagatagcagctccacagatgga
cacaaaccagaccgattcacaggaagggttgaattcaaaaacatccatttttcatatcca
acaagacctaatactcagattcttaaaggattaaatctaactgtggaacctggaaagacc
attgctcttgttggttccagtggctgtggaaaaagtaccactattcagctgttacagaga
ttttatgatccgcagcaaggagagattactctggatggacaagatcttcgaaccctcaat
gtgaaatggttgagagagaagattggagttgtgagccaggaacctattctgtttggtaca
acaattgcagagaatattcgatatggcagagaagatgtaactgacgctgaaattcagcag
gctgccaaagaagccaatgcttatgacttcattgccaacctcccagaaaagtttaacaca
atggttggtgaaagaggggctcaactgagtggagggcaaaagcagaggattgctattgct
cgtgccctagcaagaaacccaaagattctattgctggatgaagcaacatctgctctggat
actcagagtgaagctgtggtgcaagaagctttggataaggctagaaatggtcgcactaca
attttgattgctcaccgcctctccactgtaaggacggctgacgtcatagcaggatttgaa
aatggcattgtcgttgagcagggctcacacagtgaactcatggagaaaaaaggaatctat
tactctcttgtaatgcagcagagtcaaaagaaagacagcgatgaagaggaagttgagaca
gaagacgaaacagatgacgaattaggaacctttgatgacagtattgtaaaagaaaaaggt
gaaagaagaaaaagtataatgagcacattcagcaaactctcaagaagaaagtcatctatc
aagaaaatgagatcgaagaaaaaaaggaacaataatccagaggatgatcttccaagggtg
ccatttaccatggttctgcgctggaacaaaccagaatggccttaccttatttcgtgcgtg
attgcttctgctatcgctgggggtatttcgcctactttttctgtgatgtttggaaagatc
attggggcttttcaagaaatcgatggtcaaaaacggctcaaagtcactaatgtggtttca
ttaatgttcttcattttgggaatcattagtctaattgtctacctcattatcggatatacc
ataggaagagctggtgaaaatcttacaatgagactacgattgttatcattcaaagcattg
cttcgacaggaaataggatggtttgatgatcgaaggaatgctgtaggaattttgatcaca
cgtctttcaacagatgcatctcaagccaaaggggctactggaggccgtttgtttattatt
actttagccagctgcaccatgctgacagctattgtaattgcatttgtttatggatggcaa
ctcaccctcctgatttttggctgtataccagtaatccttgctgccttcgtaattaagaca
acatctatgtctggccatgcttctaaggaccaagctgctctggaagaagctggaagaata
tcaacagaagctgtggacaacataagaactgtggcttccttaacccgagaagtggcattt
tatgaaagatatacaacaagtttgaagagaccatacagggctgcaataaaaagtggacca
gtgaagggattggtttatgggctagcacagtccatccagtactttctgaatgcagctatt
ttcagatttggagcatggctaattgtgcactgctacatgaattttgaaaatatgttcata
gtgttttctgctattgtatttgctgccatgagtattggacaggccagtttacttgcacca
gacttcagcaaagcaaaccttgctgttcaaagaatcgctaaacttttggatcggaaacca
caaatagacagctatagtgaaaagggaaaagtactggatacttttgacggggatgttgaa
ttcaaacatgccagatttgtctatccaacaagaccaaaagttaaagttctgcagggactt
aacattcaggttaagaaaggccaaactcttgccttagtcggaagcagtggatgtgggaag
agtaccacaattcaactcctcgagagattttatgatcccattggcggacatgtgtttgct
gatggtattgacacaagatcattgaacttgcagtggttcagatcgcagttaggtattgtg
tctcaagagcctgttctatttgactgcagcattgctgaaaatatccaatatggagacaac
agcagaaatgtcagtcaggaggaaattgaagaagcagccaaagcagcaaatattcatagt
ttcattgaaactcttcctgagaaatacagcacaccagttggagataaaggaacccagctc
tcaggaggacagaaacaaagaattgcaattgctcgagctcttgtccggaaaccgaaagtg
ctgcttcttgatgaagctacctctgccctggataccgagagtgaaaaggtagtccagaaa
gcgttggatgatgccaggctgggaagaacctgcattgtaattgctcatcgcttgtcaact
ataaagaatgctgatgtcatagcagtcattcatcacggttcagttgttgagcaaggcacc
cacagtgaattattagcaaagcaaggcttatactacgatttagtaaatgcacaggtttct
cattag
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