Pleurodeles waltl (Iberian ribbed newt): 138265130
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Entry
138265130 CDS
T10800
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04137
Mitophagy - animal
pwl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138265130 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138265130 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138265130 (VCP)
03009 Ribosome biogenesis [BR:
pwl03009
]
138265130 (VCP)
04131 Membrane trafficking [BR:
pwl04131
]
138265130 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwl04147
]
138265130 (VCP)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
138265130 (VCP)
Ribosome biogenesis [BR:
pwl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
138265130 (VCP)
Membrane trafficking [BR:
pwl04131
]
SNARE
SNARE associated proteins
Others
138265130 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
138265130 (VCP)
Exosome [BR:
pwl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138265130 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
138265130
NCBI-ProteinID:
XP_069068793
LinkDB
All DBs
Position
1_1:60460955..60571748
Genome browser
AA seq
807 aa
AA seq
DB search
MASGSDSKSADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLL
KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI
DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD
TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR
FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA
LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI
GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF
ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADR
VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKA
NLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSA
MEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGSQS
GAGPSQGSAPGSGGNVYNEDNDDDLYG
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattcaaaatctgcagatgatctgtccactgcaattctgaagcaa
aagaaccggcctaatagactaattgttgatgaagcgatcaatgaggacaacagtgtggtg
tcgctgtcccaggctaaaatggatgaattacagttgtttaggggggatacagttcttctg
aaaggaaagaaaagacgggaagcagtctgcattgtcctttctgacgatacctgttcagat
gagaagatccgcatgaatagggttgtccgtaacaatctacgggttcgtctgggagatgtg
atcagcatccagccatgcccagatgtgaagtatggaaagcgcattcatgtactgcctatt
gatgatacagttgaagggatcactggaaacctttttgaggtgtatcttaaaccatacttc
cttgaagcctatagaccaattagaaaaggtgatattttcttggtccgtggaggaatgcgt
gcagtggagtttaaagttgttgaaaccgatccaagcccgtactgtatagtggccccagat
acagtgatccattgtgaaggggagcctatcaaacgagaggatgaagaggagtccctgaac
gaagtgggttacgatgatattggtggctgtcggaagcagttggcgcagattaaggagatg
gtggagctcccgctcaggcacccggcgctcttcaaggctataggcgtgaagcctccacgt
ggtatcctactgtatggaccccctggtactggaaagacccttatagcccgggcagttgca
aatgaaactggagctttcttcttcctgatcaatggtcctgaaatcatgagcaaactggct
ggggaatctgagagtaatctgcgtaaggcctttgaagaggcagaaaaaaatgctcctgcc
atcatattcattgatgagcttgatgccattgctccgaagagagagaagacacacggggag
gtggagcgccgtatcgtgtcgcagctgctgacgctcatggatggcctgaagcagagagca
catgtgattgtcatggctgctactaacagacccaacagcatcgaccctgcgctcagacga
tttgggcgttttgacagggaagtagatattggcattccagatgcaactggtcggctggaa
attctgcagatccacaccaagaacatgaagctcgctgatgatgttgatctggagcaggtg
gcaaatgagacccatggacacgttggtgctgacttggctgctctgtgctcagaggccgct
ctacaggctatccgaaagaagatggatctcatcgacctggaggatgaaaccattgatgcc
gaagtaatgaactcgttggctgtgaccatggatgacttcaggtgggctttaagccagagc
aacccatctgcgctgcgtgagacagttgtagaggtaccacaggtcacttgggaagatatt
ggtggtctcgaagatgtgaagagggagcttcaagaacttgtgcagtaccctgtggagcat
ccagacaaattcctcaagtttggaatgacgccttccaaaggagtgttgttttacggaccc
ccgggatgtggtaagactctactggctaaggcgatcgccaatgaatgtcaggccaacttc
atctccatcaagggcccagagctgctcaccatgtggtttggtgaatctgaagctaacgtc
cgggagatctttgataaggcgcgtcaagcagcgccttgtgtgctgttcttcgatgagctg
gactccatagccaaggctcgagggggcaacatcggtgatggcggcggcgccgcggaccga
gtcatcaatcagattctgaccgagatggacggcatgtccaccaagaagaacgtgttcatc
atcggtgctaccaaccgccccgacatcatcgaccccgccatcctgcgccccggccgcctg
gaccagctgatctacatcccgctgccggatgagaagtcacgcatggccattctgaaggcc
aacctgaggaagtcacccgtcgctaaggacgtagatgtcgatttcttggctaaaatgacc
aatggtttctctggtgcggatctgactgaaatttgccagcgagcgtgcaagttagcgatc
cgtgagtgcattgagaacgagatccggagagagcgggagcgacagaccaatccctcagcc
atggaagtggaggaggatgatccagtccctgaaatccgcaaggatcattttgaagaggct
atgcgctttgcccgccgctctgtcagtgacaacgacatcaggaaatatgagatgtttgca
cagacattacagcagagccgtggatttggcagcttcaggtttccatcaggcagccagtcc
ggagctggaccaagccaaggctctgcacccggaagtggtgggaatgtgtacaatgaagac
aatgacgacgatctgtacggataa
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