Pleurodeles waltl (Iberian ribbed newt): 138265354
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Entry
138265354 CDS
T10800
Symbol
CHRD
Name
(RefSeq) chordin
KO
K04657
chordin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138265354 (CHRD)
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
138265354
NCBI-ProteinID:
XP_069069091
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All DBs
Position
11:39251944..39284536
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AA seq
950 aa
AA seq
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MSHSGFRLLLVLASLWLVEGGLPRPKAFLPIQPEMEPLPSKGATGCSFGGRYYALEDSWH
PDLGEPFGVMHCVVCYCEPQRNRRGKAVGKVSCKNIKHDCPTPTCAHPVLLPGHCCRTCP
KAPPSTSEKKSEFTFDGFEYFQEKDDDLHKTYNDRSYLSSEDVSQDDSRTEFVALLTSPL
QSWLPATSGVAKARFTLLRSSLLFSISYERLGRPARVRFTDLDGTVLFEHPVNRMASPQG
NMICGMWRNVHKSSLHLLKTAQIQVTLVMAAHSSGEIGGRIIKHRALFAETFSAILTPED
PELQGTGGIAMLTLSDVEDNLHFILMSKGLLERGGRGRTMIPVQLQILHQDQVLREVNSS
ITAQDQDFGEVLTDLSAREMYLLAHGQLQITLETEGKQSHRISGYITGKKTCDTIQSVLS
GGDALSATRTGAVGSAKFTLYDNGTLKYQVQVAGTKSDVIGITLETKPRRKTRRNVLHDM
SGDYRNGLASGLWEEMNARDLHMLLQSELFINVATRNYEEGELRGQITSLPYSGLWARYQ
ELPIPLAGQFVIPPIRTASAGHAWISLDEHCHLHYEIVVTGLGKPDDATLNAHLHGFAEI
GETDENRQEHKRLLKGFYGSEAQGTVKDLDKELLTHLAKGSAFIQVSTKVNPSGEIRGRV
HIPNTCESGRLAVSPEDPEYEYEVLDDGKQRDPEDLKKDPNSCFFEGQTRAHGSRWTPEY
DRKCSVCSCQKRTVICDPIICQPLNCTRVVQPEGRCCPVCEERKDLKKVEKPTLTNEGCY
FDGDRSWRSAGTRWHPVVPPFGLIKCAICTCKGSTGEVHCEKVQCPRLTCANPVRAAPSD
CCKKCPVVEKSPFEMTDMMQSDGPRACKFGRHWYPNNESWHPTVPPFGEMKCITCSCVNG
VPQCKRQECTAASCSSNKRENRCCSKCRESSLDDEGDKVRDDVRRPTWSS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgagccactcgggcttcaggctccttctggtcctcgcctccctctggctggtggaggga
gggctcccgcgccccaaagccttcctgcccatccagcccgagatggagccgctgccctcc
aaaggggccacaggctgctcgtttgggggacggtactatgctcttgaagactcctggcac
cccgaccttggagagccctttggggtgatgcactgcgtggtgtgctactgtgagccgcaa
cggaatcgaagaggaaaggcggtgggcaaagtcagctgcaagaatatcaagcacgactgc
ccgaccccaacctgtgcccaccccgtcctgctgccggggcactgctgcaggacctgcccc
aaggcccctcccagcaccagcgagaagaagtccgagttcaccttcgatggctttgagtat
ttccaggaaaaggacgacgaccttcacaagacctacaacgaccgctcgtacctgagttcc
gaagacgtgtcccaggacgacagccgcacagagtttgtggctctgctgaccagccccttg
cagtcctggcttccagcaaccagtggtgtggccaaggctcgcttcaccctgctgcgctcc
agcctgctcttctccatcagctacgaaaggctgggaagacctgcccgcgtccgtttcact
gacctggatggcacagtgctttttgaacatccggttaacagaatggcctctccacagggc
aatatgatctgtgggatgtggcggaatgtccacaaatcttccctgcacctgctgaagacg
gctcagatccaggtgaccctagtgatggcggcccactcgtcaggcgagatagggggcagg
atcatcaagcaccgtgccctcttcgcagaaacttttagtgccatcctgacccctgaggac
cccgagctccagggcactgggggcattgccatgctgactttgagtgacgtggaggacaat
ttgcacttcatcctcatgtccaaggggctgctggaacgtggtgggagaggtcgcacgatg
attccagtccaactccagatccttcaccaggaccaagtgctgcgtgaggtgaactccagc
atcactgcccaggaccaggactttggcgaggtgctgacagacctctctgcaagggagatg
tacctgctggcccacggccagctgcagatcaccctggaaacggaggggaagcagagccac
cggatatccggttacatcactgggaagaagacctgtgacaccatccagagtgtgttgtct
ggaggagatgccctgagtgccaccagaaccggagctgtggggtctgccaagttcacgctg
tacgacaacgggactctgaagtaccaggtgcaagtggccggaacgaagtctgacgtaatc
gggatcactctggagactaaacccaggaggaaaaccagacgcaacgtcctgcatgacatg
agcggagactacagaaatgggctggcctccggcctgtgggaggagatgaatgcgcgtgac
ctgcacatgctactccagagtgaacttttcatcaacgtggcgaccagaaattatgaggaa
ggagaactgagaggccagatcacatctcttccctacagtggactgtgggcccgatatcaa
gaactgcccatccccctggcaggccagttcgttatcccccccatccgcactgcctcggcc
ggccacgcctggatctccctggacgagcactgccacctgcactacgagattgtggtcacg
ggcctgggcaagcccgacgatgccaccctgaatgcccatctgcacggcttcgccgagatc
ggggagaccgacgagaacagacaggaacacaagcgtctgctgaagggcttctacggttcc
gaggctcaaggcaccgtgaaggacctggacaaagaactcctgactcacctcgccaagggc
tccgccttcatccaagtcagcaccaaagtgaacccctcgggcgagatccgaggcagggtg
cacattcccaacacctgcgagtctgggcgcctggctgtgtcccctgaggaccccgagtat
gaatacgaggttttggatgatgggaagcaaagggaccccgaggatctgaagaaggacccc
aactcctgtttctttgaaggccagacgcgggcccacggatctcgatggacccctgaatat
gacaggaaatgctcagtgtgcagctgccagaaacggactgtgatctgcgaccccatcatc
tgccagcccctgaactgcacccgtgtggtacaacccgaaggtcgctgctgtccagtctgt
gaagagagaaaagatctgaagaaagtggagaaaccaacattgacaaatgaaggatgctac
tttgatggagacaggagctggcggtcagctggcactcgctggcaccccgtggtgccacct
tttggtctaatcaaatgtgccatatgtacttgcaagggatctactggtgaagtccactgt
gagaaagtgcaatgtccgcgtctcacctgcgctaaccccgtgcgtgctgccccctctgac
tgctgcaagaaatgtccagtggtcgagaaaagcccgtttgaaatgactgacatgatgcag
tcagatgggccccgggcctgcaagtttggaaggcactggtaccccaataacgagagctgg
caccccaccgtgcctcccttcggggagatgaagtgtatcacctgctcgtgtgtgaacgga
gtccctcagtgcaagcggcaggagtgcacagctgcgtcctgcagcagcaacaagcgcgag
aacagatgctgctccaagtgcagagaaagctcattggatgatgagggtgataaagtgaga
gatgacgtgcgtagacccacctggagctcataa
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