Pleurodeles waltl (Iberian ribbed newt): 138265405
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Entry
138265405 CDS
T10800
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138265405 (SOX2)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138265405 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138265405
NCBI-ProteinID:
XP_069069199
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All DBs
Position
11:74425903..74429230
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AA seq
324 aa
AA seq
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MYSMMETELKPPAPQQTTVNPASNNGGGGNKNSPDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YTLPGGLLGPPGGNGMGSGGGVGGGMNSSQRMDSYAAHMNGWANGGYGMMQEQLSYAQHP
GLSAAAQMQPMHRYDVSALPYNSMNPSAAAAAAAAQGYMNGSYMSYSQQGGGGGGGMSLG
SMGSVVKSESSSSSPPVVTSSSSHSRPGCHQAGDLRDMISMYLPGADVQEQAAAAAQSRL
HMSQHYQSAPVPSSINGTLPLSHM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagaccgagctgaagccgcctgcccctcagcagaccacggtcaac
ccggcctccaacaacggcggaggcgggaacaaaaacagcccggaccgggtcaagcggccc
atgaacgccttcatggtctggtcccgcgggcagaggcggaagatggcgcaggagaacccc
aagatgcacaactcggagatcagcaagcggctgggcgctgagtggaagctgctctccgag
tccgagaagcggcccttcatcgacgaggccaagcgcctgcgagcgctgcacatgaaggag
cacccggattacaagtaccggccgcggcgcaagaccaagactctgatgaagaaagacaag
tacacgctgcccggtgggctgctcgggccgcccggaggcaacggcatgggctccggggga
ggcgtgggcggcggcatgaactccagccagcgcatggacagctacgcggcgcacatgaac
ggctgggccaacggcggctacggcatgatgcaggagcagctgagctacgcgcagcacccg
gggctgagcgcggccgcgcagatgcagcccatgcaccgctacgacgtcagcgcgctgccg
tacaactccatgaatccctccgccgccgcggccgccgccgccgcgcagggatacatgaac
ggctcctacatgtcctactcgcagcagggcggcggcggcgggggcggcatgtccctgggc
tccatgggctcggtggtcaagtccgagtccagctcgtccagcccgcccgtggtcacctcg
tcgtcgtcgcactcccggccgggctgccaccaggccggggacctgagggacatgatcagc
atgtacctgcccggggccgacgtccaggagcaggcggcggcggccgcgcagagcagactg
cacatgtcccagcactaccagagcgcgcccgtgccctcctccataaacggcacgctgccc
ctctcgcacatgtga
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integrated database retrieval system
