Pleurodeles waltl (Iberian ribbed newt): 138265467
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Entry
138265467 CDS
T10800
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138265467 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138265467 (CSTF2)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138265467 (CSTF2)
U7-dependent histone pre-mRNA processing factors
138265467 (CSTF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
LbR_Ice_bind
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
138265467
NCBI-ProteinID:
XP_069069301
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All DBs
Position
2_1:457098255..457447191
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AA seq
693 aa
AA seq
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MAGMAGMAGMGARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETG
KPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGTPIMESP
YGEPVSPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQ
AQVVMRIVDPEIAVKILHRPAIATPLNQQQPPGPAGPPPGPQTNQPNPAGPKPQQMGGMH
VNGAPTLIQPSPMQGGLQGPGPVPSSLPGPVPGPPGGGMQPQMGMPAGGPMPMDRGPGGL
QPQIGHPTVGPLPMDRGPGSLQHSPVGPVRSASMERVPVSMPDPRAPLQRGPPVSNVPPR
GLLGDNPNDPRGPTLIKDDPRGFMGPPPQGQPMHQAPGQDHRGPPLHEMRGGPMGEPRPM
MGEPRPMMGEPRPMMGEPRPMMGDNRPMMGDNRPMMGDNRPMMGDNRPMMGDNRPMMGDN
RPMMGDNRPMMGDNRPMMGDNRPMMGDNRPMMGDNRPMMGDNRPMMGDNRPMMGDNRPMM
GDNRPMMGDNRPMMGDNRPMMGDGRGPMMDRGVPPMDNRGGRDPRAIEPRGMDSRVPVPS
SRGQMPVGMPGPGPMNIGSGAPQGPRPVPGIQGGGQGGFSPGQNQVTPQDHEKAALIMQV
LQLTPDQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggccgggatggcgggtatggctggtatgggtgcgagagacccggcggtggatcggtcc
ttgcgctcggtctttgtgggaaatattccatatgaagcaacagaagaacagctgaaggac
attttctctgaagttggtcctgttgtcagttttagactggtgtatgacagagagactggg
aaacccaagggctatggattctgtgaataccaagaccaggagactgctctcagcgccatg
cggaacctgaatggtcgcgagttcagtggcagagcactacgagtggacaatgcagccagt
gaaaagaacaaggaagagctgaaaagtctgggaacagggactcccatcatggagtcacct
tatggagagccagttagtccagaagaagccccagagtcgatcagcagagcagtggctagt
ctgccccccgaacagatgtttgagctcatgaagcaaatgaagttatgtgtgcaaaacagc
ccacaagaggcacgaaatatgcttctgcagaatccacagctggcgtatgctttacttcaa
gctcaggtggtgatgaggatcgtggatccagagattgctgtgaaaatcctacatcgtcca
gccattgcaactcctctcaaccagcagcagcctccaggcccggcaggccctcccccaggt
ccacagacgaatcaacctaatcctgcagggcctaaacctcagcaaatgggtggaatgcat
gtgaatggtgcgcctacactgatacagccttcaccaatgcagggtggactacaaggacca
ggacctgtgccatcctccttaccaggacctgtgcctggtccaccaggaggcggtatgcag
ccccagatgggaatgcctgcaggcggaccaatgccaatggataggggaccagggggtctc
caacctcagattggtcatccaacagttggaccactgcctatggacaggggaccagggagc
ctgcagcactctcctgtgggacctgtcagatcggcatccatggaacgagttccagtctct
atgccggaccctagagctcccttgcagcgtgggcccccagtctcgaatgtgcctccccga
ggcctattaggagataacccaaatgaccctcgaggacctactttaatcaaagatgacccc
agaggtttcatggggccaccgcctcagggtcagcctatgcatcaagcccccggccaagac
caccgtggtccacctcttcatgaaatgagaggagggccaatgggtgagcccaggccaatg
atgggtgagcccaggccaatgatgggtgagcccaggccaatgatgggtgagcccagacca
atgatgggagacaaccggcctatgatgggcgacaaccggcctatgatgggcgacaaccgg
cctatgatgggcgacaaccggcctatgatgggcgacaaccggcctatgatgggcgacaac
cggcctatgatgggcgacaaccggcctatgatgggcgacaaccggcctatgatgggcgac
aaccggcctatgatgggcgacaaccggccaatgatgggcgacaaccggccaatgatgggc
gacaaccggccaatgatgggggacaaccggccaatgatgggggacaaccggccaatgatg
ggggacaaccggccaatgatgggagacaaccggccaatgatgggagacaaccggccaatg
atgggagatggcagaggtcctatgatggatcgaggagttcctcccatggataaccgaggt
ggaagagatcctagagctatagagcctcgagggatggattccagagtccctgtaccttct
tctagaggtcagatgcctgtcggtatgccaggtcctggtccaatgaacattggtagcggt
gctccccaaggacctagaccggttcctggtattcagggtggaggtcaagggggcttcagt
cctggacagaaccaagtaacaccgcaagatcatgagaaggctgcactgatcatgcaggtt
ctccagttaacgccagaccagatcgctatgttaccaccagaacaaagacaaagcatcctt
atcttgaaggagcagatacagaaatccacgggtgcaccgtga
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