Pleurodeles waltl (Iberian ribbed newt): 138265488
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Entry
138265488 CDS
T10800
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138265488 (SMC4)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
138265488 (SMC4)
Condensin II
138265488 (SMC4)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
DAPDH_C
ABC_tran
Motif
Other DBs
NCBI-GeneID:
138265488
NCBI-ProteinID:
XP_069069354
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Position
11:complement(126776177..127227377)
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AA seq
1305 aa
AA seq
DB search
MAPSKRTKPSTAVAAKAPESPEPAERPPARAEVPDQQEPPAANGNPEGTPGETPQGGPGE
VLDTRSLEEILSSISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCI
IGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHQDIQSCTVEVHFQKIVDKE
GDEFEVIPNSKFYVSRTAYKDNSSVYHISGKKKTFKDVGIILRSHGIDLDHNRFLILQGE
VEQIAMMKPKGQTEHDEGMLEYLEDIIGSERLKNPIQVLCRRVELLNEQRGEKLNRVKMV
EKEKDALEGEKNKAIEFLTLENDIFKKKNHICQYYTHDLQKRIGDLDAQKEKTHEDTKDV
NEKSGKLAEEMKVKNKALKDVEKKLNKINKFIEENREKFTQLDLQDVNVREKLKHAKSKV
KKLEKQLQKDKEKVEELKNIPGQSDKIITESTTKKEALEKQKETEEDKLKKVMESLKKET
QGLQEEKEGKEKELMEFSKTVNEARSAMEVAQSELDIYLSRHNTALLQLNKAKEALTTAS
DTLRERKIAIKELEIKLPQTEQELKKKEMDLDNLVKEEVNLRTTVRDLRQKVEEAKSSLS
ANRSRGKVLDALIQQKKTGKIPGIYGRLGDLGAIDEKFDVAISSSCGALDHIVVDTIDTA
QECVNFLKRQNIGVATFIGLDKMKVSEKNMDKIKTPENIPRLFDMVKVQDEQIRPAFYFA
LRDTLVADNLDQATRVAFQKDKRWRVVTLQGQIIEQSGTMTGGGGKIMKGRMGSSVMVEI
SEEQLNKMESQLQKDTAQATHCQEEKVQLEEAVSRLRLSVREMKNTFEKYSVSIKSLSEQ
EIHLKLQVKELEASVIAAAPDKNKQKQMEKTLDELKKDHEKVAEKAGKVETEVKRLHKLI
IDINSHKLKAQQDKVDKVNKEIDECTSAITKAQVAIKTASRNLKKAEESVVRTEKEISDN
DRDVTELTEELKNLEEKATEVMKECKEAEGTLPEVQEEHRSLLQEIKAIQENEHALQKEA
LNIRLKIEQIDSHITEHQSKIKYWQREMSKISLHQIEDQPAEELAMLTQEELAAIHDPDV
VNNQIALLEAKCIEMKPNLGAIAEYKKKEELYLQRVAELDEITNERDNFRRAYEDLRKQR
LNEFMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNL
SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISL
RNNMFEIADRLIGIYKTHNTTKSVATNPKVIATKGLAELNSVGCC
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcccccagcaagagaaccaaaccgtctacggcggtggcggcaaaagcaccagagtca
ccagagcccgctgagaggccgccggcaagggcagaagtgccggatcaacaggagcccccc
gcagccaacgggaatccggaagggaccccaggggagaccccgcaagggggtcctggcgag
gtacttgatactagaagtctggaagagattttgagtagcatctcaccaccaccaccacct
gcaatgaccaatgaagctggagctcctcgtctcatgataactcacattgtcaaccagaac
ttcaaatcttatgctggtgaacaaattcttgggcctttccataagcgtttttcatgcatt
attgggccaaatggcagtggaaaatcaaacgtcattgactccatgctttttgtttttgga
tatcgagctcaaaagatcagatcaaaaaagttgtctgtgttgatccataattctgatgaa
catcaggatattcagagctgcactgttgaagttcatttccaaaagatcgttgataaggaa
ggtgatgagtttgaagtcattccaaatagtaaattctatgtgtctagaactgcttataaa
gataattcttcggtataccatataagcggaaagaagaaaaccttcaaggatgttggaatc
atactccgaagccatgggatagacctggaccacaacagattcttaatcttgcagggtgag
gttgaacaaatcgcgatgatgaaacctaaaggtcagactgaacatgatgaaggcatgctg
gagtatttagaagatataattggatcagaaagactgaaaaatcccattcaggtgttgtgt
cgcagagtggagcttttgaatgaacaaagaggagaaaagttaaatagggttaaaatggtg
gaaaaagaaaaggatgcgttggaaggagaaaaaaataaagctattgaatttctcactttg
gaaaatgacatttttaagaagaagaatcacatttgtcagtattatactcatgatcttcaa
aaacggattggtgatcttgatgctcaaaaggagaaaacccacgaagatactaaggatgtg
aacgagaagagtggtaaacttgcagaagaaatgaaagtgaagaacaaagctttaaaagat
gttgaaaaaaaactcaacaaaattaacaaattcattgaggagaaccgagagaagtttact
cagctagatttgcaagatgtcaatgtgagagagaaactgaagcatgcaaaaagtaaagtg
aaaaaacttgaaaaacaactccagaaagacaaagaaaaggttgaggagttaaaaaatata
cctggccagagtgataagattatcacggagtccaccaccaaaaaagaggctttagaaaag
caaaaagaaactgaagaagataagctgaagaaagtaatggaaagtcttaaaaaagaaaca
cagggacttcaagaggagaaggagggaaaggaaaaagaactgatggaattcagcaaaact
gtaaatgaagcacggtctgcgatggaagttgctcagtctgagctcgatatttatctgagt
cgacataatactgctcttttacaattgaataaggccaaggaagctctgacaactgcttca
gatactctgcgtgaaagaaaaattgcgatcaaagagctagagataaaattgcctcagaca
gaacaggaattgaaaaagaaagagatggatcttgataatcttgtgaaagaggaagtgaat
ttgaggactactgttcgagatcttcgtcagaaagtagaggaagccaagagttcattgtca
gcaaatcgtagcagaggaaaagttcttgatgccctgattcagcagaagaaaactggaaaa
attcctggaatatatggaagactgggtgacttgggagctattgatgagaaatttgatgta
gccatctcttcatcatgcggtgccttggatcacattgttgtcgatactattgacacagct
caagagtgtgttaattttttgaagaggcagaatattggagtagcaacatttataggctta
gacaagatgaaggtatctgaaaaaaacatggataaaatcaaaactccagagaatattcct
cgtttgtttgacatggtgaaagtacaagatgagcagattcgaccagcattttattttgct
ttgcgtgatactcttgtggctgataatttggatcaggcaaccagagtggcattccagaaa
gacaagcgatggagagtagtaaccttgcaaggacaaatcatagaacagtcaggcacaatg
actggtggtggaggaaaaattatgaaaggaagaatgggctcttcagttatggttgagatt
tcggaagaacagttaaataaaatggaatcacaactccagaaagacacagctcaagctaca
cattgtcaggaggagaaagtacagcttgaagaagcagtttcaagattacgtcttagtgtc
agagagatgaagaatacttttgaaaagtattcagtcagcattaagagcctttcagagcag
gaaatacatttaaaacttcaagtaaaagagctggaggccagtgtaattgcagcagcacct
gacaaaaacaagcagaaacaaatggaaaaaacacttgatgaacttaaaaaagaccatgag
aaagttgcagagaaagctggcaaagtggaaactgaagtgaaaagacttcataagcttatc
attgatatcaacagtcacaaacttaaagctcaacaagacaaagttgacaaagtaaacaaa
gaaatagacgagtgcacatctgccattacgaaagctcaagtggctataaagactgctagc
agaaatcttaagaaagcagaagaatcggtagtccgtacagagaaagaaatatcagataat
gacagagatgttacagagcttacagaagaattgaagaacctcgaggagaaagccactgaa
gtcatgaaagagtgtaaagaagctgagggtactttgcctgaagttcaagaggagcatcgc
agtttactgcaagaaattaaagccattcaagaaaatgagcatgcccttcaaaaagaagct
cttaatattcggctgaaaattgaacaaatagacagtcatattacagagcatcagtcaaaa
ataaagtactggcaaagagagatgtcaaaaatatcactgcatcaaatagaagatcaacca
gcagaagagcttgcaatgcttactcaggaggagcttgcagccatacatgatcctgatgtg
gttaacaatcaaattgctcttttggaagcaaaatgtattgaaatgaaacccaatcttggt
gcaattgcagagtacaaaaagaaggaagaactgtacttacagcgtgtagctgaattagat
gaaatcactaatgaaagagacaacttcagaagagcatatgaggatcttcgaaaacaaaga
cttaatgaattcatggctggttttaatgtcataacaaataaactgaaggagaattatcag
atgttgactttgggaggtgatgctgaactagaacttgtagacagcctggacccattctct
gaaggaatcatgttcagtgttcgtccaccaaagaaaagctggaaaaaaatatttaatctt
tctggaggagaaaagacacttagttcattagctttggtgtttgctcttcatcattataag
cctactccgctctacttcatggatgagattgatgcagcccttgattttaaaaatgtatct
attgttgcattttacatctatgagcaaacaaaaaatgcacagttcataattatatctctg
cggaataacatgtttgaaattgctgacagactcattggaatttacaaaacccataataca
acaaaaagtgttgcaacaaaccctaaagttattgcgacaaaaggacttgctgaacttaat
tccgttggctgctgttga
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