Pleurodeles waltl (Iberian ribbed newt): 138265525
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Entry
138265525 CDS
T10800
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138265525 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138265525 (DHX36)
03012 Translation factors [BR:
pwl03012
]
138265525 (DHX36)
Enzymes [BR:
pwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138265525 (DHX36)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138265525 (DHX36)
Translation factors [BR:
pwl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138265525 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
NPHP3_N
nSTAND3
ATPase
AAA_23
ABC_tran
AAA_11
Motif
Other DBs
NCBI-GeneID:
138265525
NCBI-ProteinID:
XP_069069420
LinkDB
All DBs
Position
11:152316228..152591987
Genome browser
AA seq
983 aa
AA seq
DB search
MSYEHRRGNPHRRGGARGGWGGFGQSSSSQQHGGYGSRDEDSGAQRSRPPPHLKGREIGL
WYARKQGQRSKEKERLERAVVRMDESREEHITRLLNSVQTKPEVKEEKEELKPWSWRATE
NKKNDLIRPNETATSTILTQDLEYLLQRNDPNMDLNEQLKADLHRKRTTSRYLEMQRFRQ
KLPSFVMREEITTVINNSQVTVISGETGCGKTTQVTQFILDDYIERGIGSACRVVCTQPR
RISAISVAERVASERAEACGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDNHL
TSVSHIVLDEIHERNLQSDVLMSIVKDLLKKRPDLKVILMSATLNAEKFSAYFDNCPMMH
IPGFTFPVKEYLLEDVIEMLRYSPENRDRRPSWKKGFMQGRIARPEKEQKEAQYRLQWPD
YLRSLQSRYSNSTIEALESVDDEKIDFDLIVALIRHIVLKGEDGAILVFLPGWADISTLN
DLLMAQVMFKSDKFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDIVH
VIDAGKIKETNYDTQNSISTMAPEWVSHANAKQRKGRAGRVQPGYCYHLYNSLRDSLLDD
YQLPEILRTPLEELCLQVKILKLGRIASFLHRLLDPPTTEAVDLAIKHLLDLNALDKQEE
LTPLGFHLARLPVEPHIGKMILFAALLCCLDPVLTIAASLSFKDPFVIPLGKEKVADSKR
KELSKNTKSDHLTVVNAFEGWEDAKEHSSRAEKEYCWEYFLSPNTLQMLHNMKGQFAEHL
VAAGFVSSKNPKDPKNNVNSDNEKLIKAVICAGLYPKVAKIRPSFSKKRQIVKVYTKSDG
KVCIHPKSVNSEESEFHYTWLVYHLKMRTTSIYLYDCTEVSPYSLLFFGGDISIQKDQDQ
DTIAVDDWIVFQSPAKTAHLVKDLRKELDVLLQEKIEKPQPVDWDHTKSRDCAVLSAIID
LITTQENVTPKNMTPRFQGGYYN
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccggagaggcaaccctcatcgcagaggaggagccaggggaggatgg
ggtggcttcggacagagctcgtcgtcccagcagcatggagggtacgggtcccgagacgag
gacagcggagcacaacgatctcgcccacccccacacttgaagggccgagagataggatta
tggtacgccaggaagcaggggcagcgcagcaaggagaaggaaagactggagagagcagtt
gttcgtatggacgaatccagagaggagcacattacacggcttctaaattcagtccagaca
aaacctgaagtcaaagaagagaaggaagaactcaagccatggtcctggcgtgctactgag
aataaaaaaaatgatctgattagaccaaacgagactgcaacctcaacaatcttgacccaa
gatttggagtatttattgcaaagaaatgatcccaatatggatttgaatgaacaacttaaa
gctgatctgcacagaaagagaaccacctcaagataccttgaaatgcagagattccggcag
aagcttccttcgtttgtgatgagagaggaaatcaccactgtgatcaacaatagccaagta
acagtaataagtggagaaactggctgtggcaagaccacacaagtaacacagtttattctg
gatgattatattgagaggggaatcggctcagcttgccgtgtagtgtgtacacaaccaagg
cgaatcagtgccatctcagtagcagagcgagtagcatcagaaagagcagaagcatgtggt
aacggcaacagtacgggctaccaaatccgtctccagagtcgactaccaagaaaacaagga
tccattttgtactgtaccacaggcatcatccttcagtggctgcagtctgacaatcactta
actagtgtgagtcacattgttctcgatgaaattcacgaaagaaacctacagtctgatgta
ttaatgtcaattgtgaaagatcttctcaagaagagacctgatcttaaggtgatcctgatg
agtgcgacattgaatgctgagaagttctctgcctattttgacaactgtccaatgatgcat
atacccggatttacattccctgtcaaggaataccttttggaagatgttattgaaatgttg
cgatattccccagaaaatcgagatcgcagaccttcgtggaagaaaggattcatgcaaggt
cgtattgcaagacctgagaaagaacaaaaagaagcacaatacagattgcagtggccggac
tacctcagaagcttgcagtcaagatattcaaacagtaccattgaggctttggaatcagtg
gatgatgagaagattgactttgaccttattgttgcacttattagacatattgtcttaaaa
ggcgaggacggggctatattggtgtttctcccaggatgggctgacattagcactttaaat
gatctgttgatggctcaagtcatgtttaaatcagataaattcattattattcctttgcat
tcattaatgccgactgtaaaccaaacacaggtttttaaaaagactccaccaggagtccga
aaaatagttattgcaaccaacattgcagagaccagcattaccatagatgatattgttcat
gtgatagacgctggaaaaataaaggaaaccaactatgatacacagaacagtatcagcaca
atggctcctgagtgggttagtcatgcaaatgccaaacagaggaaaggtcgagcagggaga
gttcagccaggttactgttaccatctttacaacagcctaagagacagccttttggatgac
tatcagttacctgaaattttgcgaactcctttagaagaactgtgcttacaagtcaagatt
ttaaaacttggtagaattgcctcatttctacatcggttgttggatccaccaaccacagaa
gctgttgacctagctataaagcatcttctggatctgaatgctctggataaacaagaagaa
ttaacccccttgggtttccacttggctaggttgcctgttgagccacatataggaaaaatg
attctctttgcagcattgttgtgctgtttagatccagtgctcacaattgcagcaagtctc
agcttcaaagatccgtttgtcattccactgggcaaagaaaaagttgcagattcaaaaagg
aaagagttatcaaagaatactaagagtgaccacttgactgttgtaaatgcatttgagggg
tgggaggatgcaaaggaacatagcagcagagcagagaaagaatactgctgggagtatttt
ctgtctccaaacactcttcagatgcttcataacatgaaaggccaatttgcagagcatctt
gttgctgcaggttttgtgagcagtaaaaaccccaaagatcctaaaaacaacgtcaactcg
gataatgaaaaattaattaaggcagtaatttgtgctggtttgtaccctaaagttgcaaag
atccgaccaagcttcagcaaaaaaagacaaatcgtgaaggtatacaccaaatcagatgga
aaagtttgtattcatcccaaatctgtcaacagtgaagaaagtgaatttcactacacttgg
cttgtttaccacctgaagatgagaactacaagcatctatctgtatgactgcacagaggtg
tctccatactcccttttgtttttcggaggtgatatttccatacagaaggatcaagaccag
gataccattgcggtagatgactggattgtgtttcagtctcctgctaaaacagcacatctg
gttaaggatttaagaaaagaacttgatgtgcttctgcaagaaaagatagaaaaaccacaa
cctgttgactgggaccacactaaatcaagagactgtgctgttctttcggcaattatagat
ctcatcacaacacaggaaaatgtaacccccaaaaacatgacgcctcgattccaagggggc
tattacaattga
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