KEGG   Pleurodeles waltl (Iberian ribbed newt): 138265567
Entry
138265567         CDS       T10800                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pwl04121]
    138265567 (HLTF)
   03400 DNA repair and recombination proteins [BR:pwl03400]
    138265567 (HLTF)
Enzymes [BR:pwl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     138265567 (HLTF)
Ubiquitin system [BR:pwl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    138265567 (HLTF)
DNA repair and recombination proteins [BR:pwl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    138265567 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C DEAD zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 ResIII zf-ANAPC11 zf-RING_5 zf-RING_UBOX RING_XB3-XBAT31 zf-C3HC4_4 AAA_34 HDA2-3 zf-Nse
Other DBs
NCBI-GeneID: 138265567
NCBI-ProteinID: XP_069069491
LinkDB
Position
11:178266071..178590801
AA seq 1025 aa
MSWMFMRGPVWKYLQSTQYGRSGNSSFASPHIFSPEPEELISLDDTIAASADEDVEAAIL
FGTLRGNVVGLRYYTGVVNNNEMVALQREPNNPYDRNAVKVNNVNGDQVGHIKKELAAAL
AHIMDNKLAKVEGVVPYGATNAFTMPVQLSFWGKEENKEAVLDHLKRYGFRLGPDSTEVL
TSFQRNIGGLMKRGHQWQPGGRRGNKRSIGSQLSFESSWVSEGAGPSYGAPILPAVQMTT
EQLKTEFDKLFEDLREDDKTREMEPAEAVGTPLLSHQKQALSWMVSRENSKDLPPFWEQR
NNLYYNTLTNFAEREKPENVLGGILADDMGLGKTLVAIALVLSNFHDGKPLPVSRTETKQ
LHKVCSDTGTSVKYNTALKPESNSHKLPRDAVQNTKVGIDLKGKRNKAEPETSVERPQRL
KAKKAKYTLSSDSEDEEVLPSKPKAAVHHLQEDEDFAAALAGSPSTVRKKPKIKGKTSPQ
LLINISSEAKPRTTLIICPLSVLSNWIEQFENHVRLDVTLNILVYYGADRVRDPSVLSKQ
DVVLTTYSVLSFEYGNRADSTLHQVKWLRVVLDEGHTIRNPNAQQTKAALHLQAQRRWVL
TGTPIQNSLKDLWSLLSFFKLKPFTDREWWHRTIQRPVTMGDAGGLRRLQSLIKTITLRR
TKTSKVKGKPVLELPDRKVFVQHITLSDEERQIYDSVKNEGKAAIGRYFNEGTVLTHYAD
VLALLVRLRQLCCHPHLVTNTSSPSVPSGDSTPEELRESLVTKMKFVLSSGSDEECAICL
DSLNFPVITHCAHIFCKPCICQVIHREQPHAKCPLCRNNLSLENLVECPIEELDQDTGEK
TEREWISSSKVDALMHALINVRKKDPKTKSVIVSQFTSFLSLIETPLRESGFLFTRLDGS
MTQKKRVEAIRSFQSKEPNSPSVMLLSMKAGGVGLNLTAASRVFLVDPAWNPAAEEQCFD
RCHRLGQTEDVIITKFIVKNSVEENMIKIQNKKRELAAGAFGAKKTNSNERKQARIDEIK
TLMDI
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgtcttggatgttcatgagaggtccggtctggaagtatttgcaatctactcagtatgga
agatctggaaactcgagttttgcttctccacatatcttcagtcctgaaccagaagaattg
atttctctggatgacaccattgctgcttcagcagatgaagatgtagaggctgctatttta
tttggtactcttcggggaaatgtagttggtctacgatactacacaggtgtggttaacaat
aatgaaatggttgcactacagagagagccaaataacccatatgataggaatgcagttaaa
gtaaacaatgtgaatggagaccaggttgggcatatcaaaaaagagcttgctgcagcactc
gcccatattatggacaacaaactggctaaggttgaaggtgttgtcccttatggtgctacc
aatgcattcacaatgcctgtgcaactcagcttttgggggaaagaagaaaacaaggaagcc
gttttggatcatttaaaaagatatggattcagactcggtcccgactcaacagaggtatta
acatcatttcagagaaatattggaggattgatgaagagaggtcaccagtggcagcccgga
ggtcggcgtggtaataagcgctctataggctcacagcttagtttcgaatcaagctgggtt
tctgagggagcaggtccaagttatggtgctccaatcctccctgctgtacaaatgacaaca
gagcagctaaagactgagtttgacaagctatttgaagacttgcgggaagatgacaaaact
agagaaatggagccagcagaggctgttggaacaccattactttcacatcagaagcaagcg
ttatcttggatggtttcacgtgagaacagcaaagatttaccacccttttgggagcaaagg
aataacctgtactacaacactcttacaaattttgcagagagagagaaaccagaaaatgtg
cttggagggattcttgcagatgatatgggactgggcaaaacacttgtcgcaattgctcta
gttctttcaaactttcatgatgggaaacctctccctgtttcaaggactgaaacaaagcag
ttgcataaggtttgcagtgacactggtacttctgtaaaatacaacacagctttgaaacct
gaatccaatagtcacaaactgcccagagatgcagtccaaaataccaaagttggtatagat
ttgaaaggaaaacgaaataaggctgaaccagaaacgtctgttgaacgtccacaaagactg
aaagccaaaaaagccaaatatacgttaagcagtgactcagaggatgaagaagtgttgcct
tcaaaaccaaaagctgcagttcaccatttgcaagaagatgaagactttgcagctgcttta
gctggatcaccaagtacagtacgcaagaaacctaaaattaaaggaaaaacctccccacaa
ctccttattaacatttcttcagaagcgaagcccagaacaacgctgatcatctgtccactt
tctgtgcttagcaactggattgaacagtttgagaaccacgtaagactagatgttaccttg
aatatacttgtttattatggtgcagatcgtgtccgagacccttcggtactgtcaaagcaa
gatgttgttctaactacatacagtgtattaagttttgaatatggaaacagagctgacagc
actttgcaccaagtgaagtggcttcgagtggtgttggatgaaggtcacaccataaggaac
ccaaatgctcagcagaccaaggcagcgctgcacctgcaggcgcaaagacgatgggtgctg
acaggtacccctattcagaattccttaaaagacttgtggtctcttttatcattttttaaa
ctgaaaccatttactgacagagagtggtggcaccgaactattcagcgacctgtcactatg
ggagacgcaggtgggcttagacgtttgcagtccctcatcaaaactataactctgagaaga
actaaaaccagcaaagttaaaggaaagccagtcctagaattacctgaccggaaagtattt
gttcagcacatcacgctttcagatgaagagaggcagatctatgactctgtgaagaatgaa
ggaaaagctgccattggcaggtactttaatgagggaacagttctgacacactatgcagat
gttcttgctctcctggtccgattaaggcagctgtgttgtcatcctcatctcgtcacaaat
acatcctctcctagtgttccttcaggtgactccaccccagaagagctacgtgagagtttg
gtgactaaaatgaagtttgttctgagctctggttcagacgaagaatgtgcaatttgcttg
gattctctaaactttcctgtaattacacactgtgcccatattttctgcaagccatgcatt
tgtcaagtcattcaccgtgagcagccccatgccaaatgtcctctttgcaggaacaatctt
tctttggagaatttggttgaatgcccgatagaggaattggaccaggatactggagaaaag
actgaaagggagtggatctccagttcaaaagttgatgcccttatgcacgcactgataaat
gtaaggaagaaggacccaaaaaccaagtctgtcattgtttctcagttcacctcgttcctc
tctctgatagaaactcctctcagagagtctggttttttgtttactcgattggatggttcc
atgactcagaagaaacgagtagaagcaattcgcagctttcagagcaaggaaccaaactct
ccatcggtaatgttgctttcaatgaaagctggtggagtaggattaaatcttacagcagct
tccagagtgtttctcgtggatccagcctggaatcctgctgctgaagagcaatgttttgac
aggtgtcataggttgggccaaacggaagacgttattattaccaagttcattgtaaagaat
tctgttgaagaaaatatgatcaaaatccagaataagaaaagagaacttgcagcaggagca
tttggggcaaaaaagacaaattcaaatgaaaggaaacaagccaggattgatgaaattaaa
actttaatggacatctaa

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