Pleurodeles waltl (Iberian ribbed newt): 138265582
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Entry
138265582 CDS
T10800
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138265582 (TRIP12)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
HECT type E3
138265582 (TRIP12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138265582
NCBI-ProteinID:
XP_069069521
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Position
11:complement(204703594..205849466)
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AA seq
2120 aa
AA seq
DB search
MSNRPNNNPGGSLRRSLRNTAGTHPQDDSSGGRSNLGQAKQKAVNPPESRKSFSKSPKVQ
AHTTPGQPKGNVSKRIGSSSNVLIPQEDDPNILNNSEKKPGHVPKKETSRGVKRSASPDY
TRANSPSTAKKSKLLVHKEAHSETNRTHKTKKRHIDQEQPLKSPQLPSTSKIHTRKGGAS
GSSPNQKRKRIDSLSYLKGVPAVETSGAFERSSKPTKLASKSVTSAKAGCSTITDSSSSA
STSSSSSAIASASSIVPQGTRGKPGKEQKTRRSRSASSPSPRRSSREKEQTKSSGSSKFD
WAARFSPKVSLPKTKLSLPGSSKSEASKPGPSGLQAKLANLRKSTKKRSESPPAELPSLR
RSTRQKTTGSCASTSRRGSGLGKRGAAEARRQDKMADPDNHQDGANSSAARTEDTPQGAA
ASSSVAGAVGLTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGA
SSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNF
DIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSK
AILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITTDEFNFVADSLPLLTQRLTHQD
KKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRMF
SLMCSNCPSLAVQLMKQNIAETLQFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELM
PCLPKEGIFAVDTMLKKGSAQNTDGAIWQWRDDRGLWHPYSRIDSRIIEVTSWYSGVDHC
RGPTQHNPPAYRRIGLNFFGSSLESGNIHKVRNLQLEYAPERASLKAAHQVGEDEISLST
LGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANSNTSGHAELKRDDARAQLMKEDPELA
KSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADADLLKDVLKNHAVSSHIASML
SSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESETLLTSPPKACTNGS
GTLLSTTISTGITTVASNTVTDLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGPRR
PKYSPPRDEDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGGSG
LARAASKDTISNNREKIRGWVKEQAHKFVERYFNSENMDGSNPALNVLQRLCAATEQLNL
QVDGSVECLEEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVCRDVRLKRFLHV
FFSAPLPGEEPLSRLEPLGNGPLLSLVHKMNNCLSQMEQFPVKVHDFPSGNGTGSSFSLN
RGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIRE
DDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQFSLQTED
ERESTDDESNPLGRAGIWTKTHTIWYKPVKEDEEGNKECIGGKRGRAQTAPTKTSPRNAK
KHDELWHDGVCPSVANPLESYLISVPPENITFEDPSLDVVLLLRVLHAISRYWYYLYDNA
ICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPAWLTELGKTCPFFFPFDTRQMLFY
VTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSS
RAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLFNPKGSQEGTKYIHN
IQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETS
LVSHDLVNIDPVVAKSVYHLEDIVRQKKRLEKDKSQTKESLQYALENLNMNGCSVEDLGL
DFTLPGFPNIELKKGGKDVAVTIHNLEEYLRLVIYWALNEGVSRQFDSFRDGFESVFPLS
HLQYFYPEELDQLLCGSKTDTWDVKTLMECCRPDHGYTHDSRAVKFLFEILSSFDSEQQR
LFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIE
IMREKLLIAAREGQQSFHLS
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcactgaggaacaca
gccgggacccatccacaagacgactcatcgggtggaaggtcaaacttagggcaggcaaag
cagaaagcagttaaccctcctgagagtagaaaatcgttttctaagtcacccaaggtgcag
gctcatacaactcctgggcaaccaaagggaaacgtttctaaaagaattggaagctcatct
aatgtgttgataccacaggaagacgaccccaacatattaaataattcagaaaagaagcct
gggcacgtgcccaagaaagagacttctcgaggtgttaaacgcagtgccagccctgattac
accagggccaattctcctagtactgctaaaaaatccaaattgcttgtgcacaaagaggct
cattcagaaactaacagaacacacaagactaagaaaaggcacattgaccaagaacagcct
ttgaaatctccacaattgccatcaacaagcaaaatccataccagaaagggtggagcttct
ggtagttccccgaatcagaagagaaaaaggatagatagtttatcttatttgaagggtgtg
ccagcagttgagacatctggtgctttcgaaaggtcttcaaaacccaccaagctggcttca
aaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcctcttcggca
tctacatcttcatcctcctctgctattgcatctgcttcttccattgtacctcagggtaca
agagggaaacccggaaaagaacagaagaccaggcgatcccgttcggcatctagccctagc
ccacggaggagtagtcgtgagaaagagcagacgaaaagcagtggatcctctaagtttgac
tgggcagctcgcttcagcccaaaagttagcttacctaaaacaaaactgtctctcccaggc
tcttccaagtctgaagcatcaaaacctggaccgtctgggctacaggcaaaattagccaat
ttgaggaaatcgacaaagaaacgcagcgaatcaccacctgctgagctccccagtttgcgg
cggagcacacgccaaaagaccacgggctcttgtgctagcaccagtcggcgaggctctggc
ctaggcaaaagaggagcagctgaagctcgccgacaggataaaatggcagatcctgataac
caccaggatggagctaattcttcagctgctcgtacagaggatactcctcaaggagcagca
gcttctagttcagttgctggggctgtgggcctgaccacttctggagagagcgagtcagat
gattcagaaatgggaaggctgcaagcactgttagaggccagaggtcttcctcctcacctt
tttggcccacttggtccaaggatgtctcagcttttccacagaacaattggaagtggagca
agttcaaaagcacaacagcttttacagggactccaagcaactgatgaaagtcagcagctt
caagctgttattgagatgtgtcagttgctggtcatgggcaacgaagaaacattgggagga
tttccagtcaagagtgttgttccagctttgataacattgctacagatggaacataacttt
gatattatgaaccatgcctgtcgagccttaacatacatgatggaagcacttcccaggtca
tctgctgttgttgttgatgcaattcctgtgtttctggaaaagctgcaagttattcagtgt
attgatgttgcagagcaagctttaactgcactggaaatgctttctcgacggcacagtaaa
gctattctgcaggcgggtgggttggcggattgcttactatatttagaatttttcagtata
aatgctcaaagaaatgcattggctattgctgccaactgctgtcagagcatcaccacagat
gagttcaattttgttgcagattctctaccattgcttacgcagcggctgactcatcaggat
aaaaagtctgtggaaagcacgtgcctctgttttgcaagactggtggacaacttccagcat
gaggagaatttgctacagcaagttgcttctaaggatttgctcacaaacattcagcagctc
ctggtagtaactcctccgatcctgagttctgggatgttcattatggtggtgcgcatgttc
tctttgatgtgttccaattgcccttctctagctgtacaactcatgaagcaaaatattgca
gaaactcttcagtttcttctttgtggggcctccaatggaagttgtcaagagcaaatcgac
cttgtgccacgaagtccacaggagctttatgagctgacttcacttatctgtgaactgatg
ccatgcttacctaaagaagggatttttgctgttgatactatgctaaaaaaagggagtgca
caaaacacagatggtgcaatatggcagtggcgtgatgatcgaggactttggcatccttat
agcagaattgacagccgaataattgaggtaacaagctggtactcaggagttgaccattgt
cgcggacccacacagcacaacccaccagcctacagaaggattggtttgaatttttttgga
tctagtctggagtctgggaatatacacaaggtgaggaatctgcagttggagtacgcacca
gaaagagcgtcactgaaggcagcccatcaggttggtgaggatgaaataagtctgtctaca
ctggggcgtgtttacactattgattttaattctatgcagcaaatcaacgaggacactgga
acagcccgtgcgattcagagaaaacctaatcctttagccaattcaaacactagtgggcat
gcagagcttaaaagggatgatgctcgagcacagctaatgaaagaagatccagaactggct
aaatccttcataaaaacattgtttggtgttctttatgaagtgtacagctcatcagcagga
cctgctgtcagacacaagtgccttagagcaattcttaggattattttttttgctgatgct
gaccttctgaaggatgtactgaaaaaccatgcagtctctagtcatattgcttctatgcta
tcgagtcaggatcttaagatagtggttggagcccttcaaatggcagagattttaatgcag
aagctgcctgacatttttagtgtttacttcagaagagaaggggtgatgcatcaagtgaaa
aatttagcagaatcagagaccctgctgacaagtccacctaaagcatgcacaaatggatca
ggaactctactttccactacaataagcactggcataaccactgttgcaagcaacacagtt
acagacctgggttccccaagcttacagcatagcagagatgattcattagatcttagccca
caaggtcgacttagtgatgttctaaaacgaaaacgactgccaaagcgtgggccacgtagg
ccaaagtattcacctccaagagatgaagacaaagtagacaatcaagctaaaagccctaca
accacacagtctcctaaatcttcattcctggcaagcttgaatccaaaaacgtggggaaga
ttaagtactcaatcgaacagcaacaacattgaaccagcacggacagcaggaggcagtggc
cttgctagagctgcctcaaaagacacaatatccaacaaccgtgaaaaaattagaggctgg
gtaaaggagcaggcgcataaatttgtggaacgctattttaattcggagaacatggatgga
agcaatcctgcactaaatgttctacaaagactttgtgctgcaactgaacagctcaacctt
caggtggatgggagtgtggagtgccttgaagaaatccgaagcatagtctcggagtctgac
gtttcttcatttgaaatccaacacagtggttttgtgaaacagcttcttctttatctaacg
tcaaaaagtgaaaaagatgcagtatgccgggacgtcagattgaagaggtttctccatgtg
ttcttttcagcaccattgcctggggaagaaccactttcaaggttagagccattgggaaat
ggaccgttactgtcacttgtgcataaaatgaacaactgtcttagtcaaatggaacagttc
ccagtaaaagtacacgacttccccagtggaaacggaacgggcagcagcttttctcttaac
agaggatcccaagcattaaaatttttcaacactcaccaattgaaatgccagttgcaacga
catccagattgtacgaatgtcaaacagtggaaaggaggacctgttaaaattgatcctttg
gctttggtccaggcgattgaacgataccttgtagtaagaggctatggaagaattagagaa
gatgacgaggacagtgatgatgatggctcagatgaggaaattgatgaatctttggctgct
cagtttttgaattcagggaatgtgaggcataggttgcagttttacattggtgatcactta
ttaccatataatatgactgtgtaccaggcagtccggcagttcagtttacagacagaagat
gagcgggagtccactgatgatgaaagtaatccattgggaagggctggaatttggacaaaa
acccatacaatatggtataaacctgtgaaagaggatgaagagggtaacaaggagtgtatc
ggtggtaaaagaggaagggcgcaaactgctccaaccaaaacatccccaagaaatgcaaaa
aagcatgatgagttgtggcatgacggtgtatgcccttcagtggcaaatccattggaatct
tacctcatatctgttccacccgaaaacataacgtttgaagatccatcattagatgttgtc
ctccttttgcgggttttacatgctattagtcgatattggtactatttgtatgataatgct
atctgcaaagagattattccaacatcagaatttattaatagtaaactgactgcaaaagcc
aaccggcagcttcaggatcctttggtgattatgacgggaaacataccagcatggctaact
gaacttgggaaaacatgcccatttttctttccctttgatacacggcaaatgctattttac
gtaactgcatttgatcgagatcgagccatgcagagactgcttgacacaaatccagaaatc
aaccagtcagactctcaggacagcagagtagcacccagactggacagaaaaaaacgcact
gtgaatcgagaggagctgttgaagcaggcagaatctgtaatgcaggatcttggcagttca
cgggccatgctggaaatccagtatgaaaatgaagttggaactggactcgggccaacattg
gagttttatgcacttgtttctcaagagctgcaacgagctgacttgggcctctggagaggt
gaagaggtcacccttttcaatcctaaaggaagccaggaaggaaccaagtatattcacaac
atccagggactatttgctcttccttttggcagaactgctaaaccagctcatattgcgaaa
gttaaaatgaagttccgttttcttggcaagttaatggcaaaagcaatcatggatttcaga
ttggtggaccttcctcttggccttcctttctacaaatggatgctgcgacaagaaacatca
ttagtttctcacgatcttgtgaacattgatccagtagtagcaaaatcagtttatcatcta
gaagatattgtcagacaaaaaaaaaggctggaaaaggataagtcacagaccaaagaaagt
ttgcagtatgcattggagaatctgaatatgaatggttgctcagtggaagatttgggattg
gatttcacgttaccaggctttcccaacattgaactgaaaaaagggggaaaagacgtagca
gtgacgatacacaatttagaagaatatttaagattggtaatttactgggcattaaatgaa
ggtgtttctcggcagttcgactcatttagagatggatttgaatcagtcttccctctaagc
catcttcagtatttttaccccgaggagttggatcagcttctttgtggtagtaaaacagat
acgtgggatgtgaaaactttaatggaatgctgcagaccagaccacggatacacccatgac
agtcgggctgtgaagttcctgtttgagattctcagtagttttgacagtgagcagcagcgg
ctatttctccaatttgttactggtagccccagactgcccgtaggaggcttccgaagttta
aatcctccattgacaattgttcgcaagacgtttgaatccacagaaaatccagatgacttc
ttgccttcagtaatgacttgtgtgaactatctcaagctgccagactattcaagtattgaa
ataatgcgtgaaaaactgttaatagcagcaagagaagggcagcagtcattccatctttcc
tga
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integrated database retrieval system
